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The map label for this gene is yrdA [H]

Identifier: 157959872

GI number: 157959872

Start: 43968

End: 44525

Strand: Reverse

Name: yrdA [H]

Synonym: Spea_0042

Alternate gene names: 157959872

Gene position: 44525-43968 (Counterclockwise)

Preceding gene: 157959873

Following gene: 157959869

Centisome position: 0.86

GC content: 47.13

Gene sequence:

>558_bases
ATGACTAGCTCGAGAAACAATAAGTCACTGCGATCATATAAGGGAACCGTGCCAGCGCTTAAGAAGGATGTTTATGTCGA
TCAAGACTGTGTGCTTGTGGGCGATATTACCTTAGATGATGACTCTAGTGTTTGGCCTTTAGTTGCCGCACGTGGTGATG
TAAATCATATCTATATAGGTAAGCGCTCAAATATCCAAGACGGTACCGTGTTGCATGTCACTCGAAAATCACCATCGTTG
CCAGAAGGCCACCCATTGATCATTGGTGATGACGTGACAATTGGACACAAGGCTATGCTCCATGGGTGTAAGGTCGGTAA
TCGTATTTTAGTCGGCATGGGCGCCATCATTTTGGATGGTGCCATATTAGAAGATGATGTGATCTTGGGAGCAGGCTCTT
TAGTACCACCAGGTAAAGTACTTAAGAGCGGCTATCTTTACGTGGGCAGTCCAGCGAAACAGGCGCGCCCATTGACGGAA
GCGGAGCTTGCCTTCCTGCCCCAGTCGGCTGATAACTATGTCAGGCTTAAGAATGAGTATTTGCAAGAAGGCGAATAG

Upstream 100 bases:

>100_bases
AATTAAACTCTAGTTTTATTCCTGCTTGCTTATAAAACCCACTGACTAGTCACTTTTTAGGCTTTATAATGCCAAAAAAC
GCCATTTAAAGGACTTTTAC

Downstream 100 bases:

>100_bases
TAAGTGTTATAGCTTTCTATAAATTAGACCTATAACAGCACCACTCTTCCTTGCTCATCGAATATCTCTTGTTCGATGAG
CGCTTCCACCTCTTCTTCGA

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTSSRNNKSLRSYKGTVPALKKDVYVDQDCVLVGDITLDDDSSVWPLVAARGDVNHIYIGKRSNIQDGTVLHVTRKSPSL
PEGHPLIIGDDVTIGHKAMLHGCKVGNRILVGMGAIILDGAILEDDVILGAGSLVPPGKVLKSGYLYVGSPAKQARPLTE
AELAFLPQSADNYVRLKNEYLQEGE

Sequences:

>Translated_185_residues
MTSSRNNKSLRSYKGTVPALKKDVYVDQDCVLVGDITLDDDSSVWPLVAARGDVNHIYIGKRSNIQDGTVLHVTRKSPSL
PEGHPLIIGDDVTIGHKAMLHGCKVGNRILVGMGAIILDGAILEDDVILGAGSLVPPGKVLKSGYLYVGSPAKQARPLTE
AELAFLPQSADNYVRLKNEYLQEGE
>Mature_184_residues
TSSRNNKSLRSYKGTVPALKKDVYVDQDCVLVGDITLDDDSSVWPLVAARGDVNHIYIGKRSNIQDGTVLHVTRKSPSLP
EGHPLIIGDDVTIGHKAMLHGCKVGNRILVGMGAIILDGAILEDDVILGAGSLVPPGKVLKSGYLYVGSPAKQARPLTEA
ELAFLPQSADNYVRLKNEYLQEGE

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=175, Percent_Identity=59.4285714285714, Blast_Score=222, Evalue=1e-59,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=37.7358490566038, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI87081681, Length=165, Percent_Identity=30.9090909090909, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19903; Mature: 19772

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSRNNKSLRSYKGTVPALKKDVYVDQDCVLVGDITLDDDSSVWPLVAARGDVNHIYIG
CCCCCCCCCHHHHCCCCCCHHHCEEECCCEEEEEEEEECCCCCEEEEEEECCCCCEEEEE
KRSNIQDGTVLHVTRKSPSLPEGHPLIIGDDVTIGHKAMLHGCKVGNRILVGMGAIILDG
CCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEECCHHHCCC
AILEDDVILGAGSLVPPGKVLKSGYLYVGSPAKQARPLTEAELAFLPQSADNYVRLKNEY
EEECCCEEEECCCCCCCHHHHHCCEEEEECCHHHCCCCCCHHEEECCCCCCCEEEECHHH
LQEGE
HCCCC
>Mature Secondary Structure 
TSSRNNKSLRSYKGTVPALKKDVYVDQDCVLVGDITLDDDSSVWPLVAARGDVNHIYIG
CCCCCCCCHHHHCCCCCCHHHCEEECCCEEEEEEEEECCCCCEEEEEEECCCCCEEEEE
KRSNIQDGTVLHVTRKSPSLPEGHPLIIGDDVTIGHKAMLHGCKVGNRILVGMGAIILDG
CCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCEEEEECCHHHCCC
AILEDDVILGAGSLVPPGKVLKSGYLYVGSPAKQARPLTEAELAFLPQSADNYVRLKNEY
EEECCCEEEECCCCCCCHHHHHCCEEEEECCHHHCCCCCCHHEEECCCCCCCEEEECHHH
LQEGE
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]