| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959873
Identifier: 157959873
GI number: 157959873
Start: 57162
End: 59639
Strand: Reverse
Name: 157959873
Synonym: Spea_0043
Alternate gene names: NA
Gene position: 59639-57162 (Counterclockwise)
Preceding gene: 157959874
Following gene: 157959872
Centisome position: 1.15
GC content: 37.73
Gene sequence:
>2478_bases ATGAATACATTAGATTTGCGTCTTGAACATCAATTTTTTGTCAACGATTTTGGCGAGTATTATCTACCTAGCGTAAACAG GAACACCTTCAAAAAAATAGATTCAAATACTATTTTCAAACAAACCTTTAAAGATGAAATATTCCAAGAAGATCGGTTAC ACATCGTCATAGGGACTGACTCAGGTTTACTACTAAATTATATACTGATGAATGGCATCCCAAGCGGGAGTAAATATATT TTTATCGAACCTGCTGCAGTATTAGATATACTCAACATTAATATTGATGCTAAGTTTCAGCAACAAGTTAAATTAATTGA AATTGAAGAGTTTGCCAAACAATTGGCAAACGATGAATATGACCTTTATCTGATTAAAAATCAGTATATTACGCACAACT CAATGGCATCGTGTGATGGTATTGTTGAAGAATACAATACCATTATCTATAACGTGCAAAAACAGCTTACCAACCTACAT TACGCCAGAAATCGTTTAGTTCGCCACAAAGACTTTCTAATCCAACAGTTAAGAAACATTGCAGATAATCAATACCCAGC CTCTTTATTACGCAATAGATTTGAAGGGAAGTCTTGTATTGTTATTGGTGGCGGCCCATCTCTTGACGAGCATATGGAAT GGATTACTAAAAACTACAATCAATTATTTATAATCACAGTATCAAGGGTGGCCGCAAAGCTATCCAAAGCTAATATTCCT GCTCATATTATCGTATCAATTGATCCTCACGACATTAGCTTTGAAGCAAATATAGACACCATGGCTTTGGCACAAGAAAG CTTACTTATCAATTCCTACCACATAAACCATCGCATTCTCTCACAATGGCAAGGGAGCTCCCTGTATGTAGGCCCAAGAA TCCCTTGGTCTAAAGCTGATAGCGATAATGTTTCATCAGTAGGCCCAACTGTAACTAACAGTGCAGTCCGCATCGCAATC GAATTGGGGTTTTCAACAATCTTACTAGCTGGAGCAGATTTCTGTCACTCCAGTACAGGGGCCTCACACGCCAAAGGGTC TGTTGAAGCTGACGCGGGACTGAATCACAGTAGAATCGATGAATGGGTAGAAACCTACGCCGGTAACAAGGCTGAAACCC CTGTAGAACTATTAGGAGCGGCCCAAACGCTACAAATAGAAGCCGCAAATCACCCAACTGTAAATATAATCAATTTATCA ATCGATGCGGCCAAGCTTGAAGGAGTCAACTATCAAGCTGCCGAAACGGTAAACTTGATGACTACAGATATGACACCAAA GCAGGTGTTAGATTTAATAGAAACTCTGATAGAAGATAAAAGCCTATACCTCGACAATATGCTGACAGACTTACAGCTCT CAACAGAAAGCCTTAGTGATATCAATAAACTATCACTTCAAGCTATCGACCTTAATTTAGAGATAAAATCTGTCAGCGTA TCGTCAAAAAAATATCGAAATATAGCCAATAAAATTAGCCGTATAGAAGAACAGATCGATAACCAGCACGGTAAATTTTC TTATTTAGTCAAAGAATATGGTTACGTTGAATTTGCAAAATTCTTAACTACAAAGGAAAGTAAGCACTGGACTGCAGATG AGATGCAAAAAATGACTCACCTGTACTACGAAGCGTTTAAATGCTTAACAGAGGAGCTGCTAGGTTACATAACAGATGCC ACTAATATTATAAAAACTCGCCAGCTAGAACTTATCAAAAACGTCAATTTAGCTGAACTAACTCGCCAATGGGAACAACA CAATCAACCAGGAAGAGTTCATATTTTCCAAAAGGTAAGAACAGAACTTGGCCTAAGTTACGATGATACTCATGAGTGCT TAACTGCAGCAAAAGCGAATTACCACACCCAATTAACAGCAAAAACCCATTCCTATTTTTCTATGAAAAAGACGAATTCA TCGCTTCATAATACATTAGCGAAAATTACTGACTTATATAAAAGTAAAAATAGCGCAGGGCTTCAACAGCTGTTCCATAG CATTGAGCCAATGATAGAAAGTGATAGCTTAGCGCAACGTTTATTCTATCTAGCCAAAAGCTACGTGTTTATCCTCAAAG AGGATAATATGGCTGCATTATCCGAATTACAGAAAATTGATGAGATTAATCAAACGGAAGTAATCCTAAAACAGATGATA GCACTTGCGTCAGAGCTTCAAATAATTGATGTTACTGTACAATCCCTTGCGAAAATAACGGCCTTTAGTAATGAGTATTT ACCCTTATATGCCCATGCCTTAACAATTCAAGGCGATAATATTCAAGCCATCAATACCTACTTAGATTATTTGGACGTCA TGCCAAACGATACAAAAGTACGCTTAAGCCTTGGGATATTCTTACTGAAGATAGGGCAGGTAGATGGCGCTATAACCTGC TTCAAGCAAGTATTAACGGTCGATATTAACAACTTAAGTGCACTAAGTTACCTGAAACAACTAGTCCCTACTCAATAG
Upstream 100 bases:
>100_bases CCGCTCCTACTCAGCGAACCCAAATAAAAACTTATCATTTTTATCCATAACTAAAGCCATCAAGCCATTTAAAGTACTAC GCTAAAAAGGTAAACAAACC
Downstream 100 bases:
>100_bases TTTCTTCGCTCCTAATAACCATCACTTTCTCCATGACCTATACGAACGTATAGGTTGTAGAGAAGGCTATACGACTCCCC TCCCTCTATTTCAGTACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 825; Mature: 825
Protein sequence:
>825_residues MNTLDLRLEHQFFVNDFGEYYLPSVNRNTFKKIDSNTIFKQTFKDEIFQEDRLHIVIGTDSGLLLNYILMNGIPSGSKYI FIEPAAVLDILNINIDAKFQQQVKLIEIEEFAKQLANDEYDLYLIKNQYITHNSMASCDGIVEEYNTIIYNVQKQLTNLH YARNRLVRHKDFLIQQLRNIADNQYPASLLRNRFEGKSCIVIGGGPSLDEHMEWITKNYNQLFIITVSRVAAKLSKANIP AHIIVSIDPHDISFEANIDTMALAQESLLINSYHINHRILSQWQGSSLYVGPRIPWSKADSDNVSSVGPTVTNSAVRIAI ELGFSTILLAGADFCHSSTGASHAKGSVEADAGLNHSRIDEWVETYAGNKAETPVELLGAAQTLQIEAANHPTVNIINLS IDAAKLEGVNYQAAETVNLMTTDMTPKQVLDLIETLIEDKSLYLDNMLTDLQLSTESLSDINKLSLQAIDLNLEIKSVSV SSKKYRNIANKISRIEEQIDNQHGKFSYLVKEYGYVEFAKFLTTKESKHWTADEMQKMTHLYYEAFKCLTEELLGYITDA TNIIKTRQLELIKNVNLAELTRQWEQHNQPGRVHIFQKVRTELGLSYDDTHECLTAAKANYHTQLTAKTHSYFSMKKTNS SLHNTLAKITDLYKSKNSAGLQQLFHSIEPMIESDSLAQRLFYLAKSYVFILKEDNMAALSELQKIDEINQTEVILKQMI ALASELQIIDVTVQSLAKITAFSNEYLPLYAHALTIQGDNIQAINTYLDYLDVMPNDTKVRLSLGIFLLKIGQVDGAITC FKQVLTVDINNLSALSYLKQLVPTQ
Sequences:
>Translated_825_residues MNTLDLRLEHQFFVNDFGEYYLPSVNRNTFKKIDSNTIFKQTFKDEIFQEDRLHIVIGTDSGLLLNYILMNGIPSGSKYI FIEPAAVLDILNINIDAKFQQQVKLIEIEEFAKQLANDEYDLYLIKNQYITHNSMASCDGIVEEYNTIIYNVQKQLTNLH YARNRLVRHKDFLIQQLRNIADNQYPASLLRNRFEGKSCIVIGGGPSLDEHMEWITKNYNQLFIITVSRVAAKLSKANIP AHIIVSIDPHDISFEANIDTMALAQESLLINSYHINHRILSQWQGSSLYVGPRIPWSKADSDNVSSVGPTVTNSAVRIAI ELGFSTILLAGADFCHSSTGASHAKGSVEADAGLNHSRIDEWVETYAGNKAETPVELLGAAQTLQIEAANHPTVNIINLS IDAAKLEGVNYQAAETVNLMTTDMTPKQVLDLIETLIEDKSLYLDNMLTDLQLSTESLSDINKLSLQAIDLNLEIKSVSV SSKKYRNIANKISRIEEQIDNQHGKFSYLVKEYGYVEFAKFLTTKESKHWTADEMQKMTHLYYEAFKCLTEELLGYITDA TNIIKTRQLELIKNVNLAELTRQWEQHNQPGRVHIFQKVRTELGLSYDDTHECLTAAKANYHTQLTAKTHSYFSMKKTNS SLHNTLAKITDLYKSKNSAGLQQLFHSIEPMIESDSLAQRLFYLAKSYVFILKEDNMAALSELQKIDEINQTEVILKQMI ALASELQIIDVTVQSLAKITAFSNEYLPLYAHALTIQGDNIQAINTYLDYLDVMPNDTKVRLSLGIFLLKIGQVDGAITC FKQVLTVDINNLSALSYLKQLVPTQ >Mature_825_residues MNTLDLRLEHQFFVNDFGEYYLPSVNRNTFKKIDSNTIFKQTFKDEIFQEDRLHIVIGTDSGLLLNYILMNGIPSGSKYI FIEPAAVLDILNINIDAKFQQQVKLIEIEEFAKQLANDEYDLYLIKNQYITHNSMASCDGIVEEYNTIIYNVQKQLTNLH YARNRLVRHKDFLIQQLRNIADNQYPASLLRNRFEGKSCIVIGGGPSLDEHMEWITKNYNQLFIITVSRVAAKLSKANIP AHIIVSIDPHDISFEANIDTMALAQESLLINSYHINHRILSQWQGSSLYVGPRIPWSKADSDNVSSVGPTVTNSAVRIAI ELGFSTILLAGADFCHSSTGASHAKGSVEADAGLNHSRIDEWVETYAGNKAETPVELLGAAQTLQIEAANHPTVNIINLS IDAAKLEGVNYQAAETVNLMTTDMTPKQVLDLIETLIEDKSLYLDNMLTDLQLSTESLSDINKLSLQAIDLNLEIKSVSV SSKKYRNIANKISRIEEQIDNQHGKFSYLVKEYGYVEFAKFLTTKESKHWTADEMQKMTHLYYEAFKCLTEELLGYITDA TNIIKTRQLELIKNVNLAELTRQWEQHNQPGRVHIFQKVRTELGLSYDDTHECLTAAKANYHTQLTAKTHSYFSMKKTNS SLHNTLAKITDLYKSKNSAGLQQLFHSIEPMIESDSLAQRLFYLAKSYVFILKEDNMAALSELQKIDEINQTEVILKQMI ALASELQIIDVTVQSLAKITAFSNEYLPLYAHALTIQGDNIQAINTYLDYLDVMPNDTKVRLSLGIFLLKIGQVDGAITC FKQVLTVDINNLSALSYLKQLVPTQ
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93298; Mature: 93298
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLDLRLEHQFFVNDFGEYYLPSVNRNTFKKIDSNTIFKQTFKDEIFQEDRLHIVIGTD CCCEEEEEEHHHHHHCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC SGLLLNYILMNGIPSGSKYIFIEPAAVLDILNINIDAKFQQQVKLIEIEEFAKQLANDEY CCHHHHHHHHCCCCCCCCEEEECHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCE DLYLIKNQYITHNSMASCDGIVEEYNTIIYNVQKQLTNLHYARNRLVRHKDFLIQQLRNI EEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADNQYPASLLRNRFEGKSCIVIGGGPSLDEHMEWITKNYNQLFIITVSRVAAKLSKANIP CCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCC AHIIVSIDPHDISFEANIDTMALAQESLLINSYHINHRILSQWQGSSLYVGPRIPWSKAD EEEEEEECCCCEEEECCCCHHHHHHHHHEEEEEECCHHHHHHCCCCEEEECCCCCCCCCC SDNVSSVGPTVTNSAVRIAIELGFSTILLAGADFCHSSTGASHAKGSVEADAGLNHSRID CCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHH EWVETYAGNKAETPVELLGAAQTLQIEAANHPTVNIINLSIDAAKLEGVNYQAAETVNLM HHHHHHCCCCCCCCHHHHCCCEEEEEEECCCCEEEEEEEEEEHHHCCCCCCCHHCEEEEE TTDMTPKQVLDLIETLIEDKSLYLDNMLTDLQLSTESLSDINKLSLQAIDLNLEIKSVSV ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEECHHHHHHHHHHEEEEEEEEEEEEEEEC SSKKYRNIANKISRIEEQIDNQHGKFSYLVKEYGYVEFAKFLTTKESKHWTADEMQKMTH CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH LYYEAFKCLTEELLGYITDATNIIKTRQLELIKNVNLAELTRQWEQHNQPGRVHIFQKVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHH TELGLSYDDTHECLTAAKANYHTQLTAKTHSYFSMKKTNSSLHNTLAKITDLYKSKNSAG HHHCCCCCCHHHHHHHHHCCCEEEEEEEHHHHEEEHHCCHHHHHHHHHHHHHHHCCCCHH LQQLFHSIEPMIESDSLAQRLFYLAKSYVFILKEDNMAALSELQKIDEINQTEVILKQMI HHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHH ALASELQIIDVTVQSLAKITAFSNEYLPLYAHALTIQGDNIQAINTYLDYLDVMPNDTKV HHHHCCEEEHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEE RLSLGIFLLKIGQVDGAITCFKQVLTVDINNLSALSYLKQLVPTQ EEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MNTLDLRLEHQFFVNDFGEYYLPSVNRNTFKKIDSNTIFKQTFKDEIFQEDRLHIVIGTD CCCEEEEEEHHHHHHCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC SGLLLNYILMNGIPSGSKYIFIEPAAVLDILNINIDAKFQQQVKLIEIEEFAKQLANDEY CCHHHHHHHHCCCCCCCCEEEECHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCE DLYLIKNQYITHNSMASCDGIVEEYNTIIYNVQKQLTNLHYARNRLVRHKDFLIQQLRNI EEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADNQYPASLLRNRFEGKSCIVIGGGPSLDEHMEWITKNYNQLFIITVSRVAAKLSKANIP CCCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHCCCC AHIIVSIDPHDISFEANIDTMALAQESLLINSYHINHRILSQWQGSSLYVGPRIPWSKAD EEEEEEECCCCEEEECCCCHHHHHHHHHEEEEEECCHHHHHHCCCCEEEECCCCCCCCCC SDNVSSVGPTVTNSAVRIAIELGFSTILLAGADFCHSSTGASHAKGSVEADAGLNHSRID CCCCCCCCCCCCCCEEEEEEEECCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCHHHHH EWVETYAGNKAETPVELLGAAQTLQIEAANHPTVNIINLSIDAAKLEGVNYQAAETVNLM HHHHHHCCCCCCCCHHHHCCCEEEEEEECCCCEEEEEEEEEEHHHCCCCCCCHHCEEEEE TTDMTPKQVLDLIETLIEDKSLYLDNMLTDLQLSTESLSDINKLSLQAIDLNLEIKSVSV ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEECHHHHHHHHHHEEEEEEEEEEEEEEEC SSKKYRNIANKISRIEEQIDNQHGKFSYLVKEYGYVEFAKFLTTKESKHWTADEMQKMTH CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHH LYYEAFKCLTEELLGYITDATNIIKTRQLELIKNVNLAELTRQWEQHNQPGRVHIFQKVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEHHHHHHH TELGLSYDDTHECLTAAKANYHTQLTAKTHSYFSMKKTNSSLHNTLAKITDLYKSKNSAG HHHCCCCCCHHHHHHHHHCCCEEEEEEEHHHHEEEHHCCHHHHHHHHHHHHHHHCCCCHH LQQLFHSIEPMIESDSLAQRLFYLAKSYVFILKEDNMAALSELQKIDEINQTEVILKQMI HHHHHHHHCCCCCCHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHH ALASELQIIDVTVQSLAKITAFSNEYLPLYAHALTIQGDNIQAINTYLDYLDVMPNDTKV HHHHCCEEEHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEE RLSLGIFLLKIGQVDGAITCFKQVLTVDINNLSALSYLKQLVPTQ EEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA