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The map label for this gene is 157959865

Identifier: 157959865

GI number: 157959865

Start: 38252

End: 39811

Strand: Reverse

Name: 157959865

Synonym: Spea_0035

Alternate gene names: NA

Gene position: 39811-38252 (Counterclockwise)

Preceding gene: 157959869

Following gene: 157959861

Centisome position: 0.77

GC content: 46.41

Gene sequence:

>1560_bases
ATGCGCCAGTGTCGATCAACAAGCTACTATTTCCGCGCCTTTAGTTATTACGGCCCAGTAGATGATCTTACCGATGCTGA
TACTGTCGCTTTAGCGCTAACACTTGAGGAACTTAGTGATTCAGGCCTACTCGATAACCAAGCACGCTTGCAAGAGCAGT
ATGCCGTCACCCTATACCGTTACTTTGCAGATAACGATGCGGCTGAAGCCTTAGCTCCGTTACTCGCTCAGTTAGATTCA
CAACTAAAGCAACTGGCAACATCAACGCCTAATACAAGCAATGACTATGCGTTGCTAGAAACTCTCAAAGCCTACGGTTT
CCTACTTAATAAGAGCCGTAAAGATGTCGATGGCGAGCTTAACAAAGTATTACTAGCAGCCGATCTAAATACACCGCTAC
TCGAGTTTGCAGCGAGTCCAGCGAGTATTCGTGCCGAGAGTGATTGGCCACGCACCAATGCATACTGGGCCTTAGCACTG
TACCGCCTCGCCCTTCCATCATCAGAAGATGGTGAAGAGACCGAGCAAGAGCTTGCCGTAGATGAAGCCGTAGCTGCAAT
AGCTAAAGCCGACGTAACGCTACGTGGTGATGCCGCAAAAGATGCTTATACGGCAGGCTTTCATGTAAACGTATTTGGCG
GCCAAGAGCTGTGTGAAGAGAATAGCGAAATATGCCGTATTCCAGAGCTTAAAACCGCCCTACCTATTGAGCACCATTGC
TCTGATAGCCTATTCATATTGACACAAGATCTAAACGAACAAGAACTAGCTGAGAGCTGCACCAAGCTGACATCTCAAGA
GTCTAACTTCCACAACGTGCTAGAAACCAAACTTGAGCCTGCGCCCAATGACTTTAATACCGCCCTTAGAGTCGTCGCCT
TTAAGAACTGGAGCCAATATCACTTAAATGGTCAGCTTATCTTCGACATCAATACCGATAACGGTGGGATGTATATCGAA
GGTACACCGTCAAAACCCGGTAACCAAGCCACCTTCTTTGCTTACCGCCAATGGTGGATTGAGCCAGAATTTAAAGTCTG
GAACTTGAACCATGAATATGTGCACTATCTCGATGGTCACTTCGTAAAATACGCTGGATTTGGCCACTTCCCCGAGAAAA
TGGTGTGGTGGTCTGAAGGTCTAGCCGAATACATCTCTAAAGGTGATAACAACCCATCGGCACTTCGCGTTATTAAGCGT
GATATAGAAGAAGCTCCTACTCTAGAAGAGATCTTTGCCACCGAGTATAAGGATGGCCAAGACAGAACTTACAAGTGGAG
CTACATGGCGATTCGCTTCCTAGCGGAAAACCACCACACTGAGTTTGTACAGTTAAGCCATTACCTTAAAACCGACTACT
TTGAAGGCTATGACCAGCTAATGGCTTCATTGACTGAACATCAACCCCAGTTTGCCGATTGGTTAAACACTCAGGTTAAT
GCCTTTAATGATAGTGAAGAGGAAGCAAAGCCAAGACTGCACAAGCAGGGTAGATATGACTACCGTGACTATTTGCAGCC
ACAGCATTTAGCCCATGGTGAGAACCATCTGAAGTTCTAG

Upstream 100 bases:

>100_bases
TCAATAAATCGAAGGGAATAATAATTAAGGGATAAAAAATGAATACACCCTCAAAGTTCGCTATGACTATTATAGCGGGA
ATGCTCGCCTCTCTCTCTGG

Downstream 100 bases:

>100_bases
GCACAACGCCAATTTGTGTCCATCCGTGGCAAATTGGCATAAGTGTTCTGACCTCTAGGGATAGAGGAAATGCGAATAAA
TGTATGGAACATTTATCGCC

Product: collagenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MRQCRSTSYYFRAFSYYGPVDDLTDADTVALALTLEELSDSGLLDNQARLQEQYAVTLYRYFADNDAAEALAPLLAQLDS
QLKQLATSTPNTSNDYALLETLKAYGFLLNKSRKDVDGELNKVLLAADLNTPLLEFAASPASIRAESDWPRTNAYWALAL
YRLALPSSEDGEETEQELAVDEAVAAIAKADVTLRGDAAKDAYTAGFHVNVFGGQELCEENSEICRIPELKTALPIEHHC
SDSLFILTQDLNEQELAESCTKLTSQESNFHNVLETKLEPAPNDFNTALRVVAFKNWSQYHLNGQLIFDINTDNGGMYIE
GTPSKPGNQATFFAYRQWWIEPEFKVWNLNHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDNNPSALRVIKR
DIEEAPTLEEIFATEYKDGQDRTYKWSYMAIRFLAENHHTEFVQLSHYLKTDYFEGYDQLMASLTEHQPQFADWLNTQVN
AFNDSEEEAKPRLHKQGRYDYRDYLQPQHLAHGENHLKF

Sequences:

>Translated_519_residues
MRQCRSTSYYFRAFSYYGPVDDLTDADTVALALTLEELSDSGLLDNQARLQEQYAVTLYRYFADNDAAEALAPLLAQLDS
QLKQLATSTPNTSNDYALLETLKAYGFLLNKSRKDVDGELNKVLLAADLNTPLLEFAASPASIRAESDWPRTNAYWALAL
YRLALPSSEDGEETEQELAVDEAVAAIAKADVTLRGDAAKDAYTAGFHVNVFGGQELCEENSEICRIPELKTALPIEHHC
SDSLFILTQDLNEQELAESCTKLTSQESNFHNVLETKLEPAPNDFNTALRVVAFKNWSQYHLNGQLIFDINTDNGGMYIE
GTPSKPGNQATFFAYRQWWIEPEFKVWNLNHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDNNPSALRVIKR
DIEEAPTLEEIFATEYKDGQDRTYKWSYMAIRFLAENHHTEFVQLSHYLKTDYFEGYDQLMASLTEHQPQFADWLNTQVN
AFNDSEEEAKPRLHKQGRYDYRDYLQPQHLAHGENHLKF
>Mature_519_residues
MRQCRSTSYYFRAFSYYGPVDDLTDADTVALALTLEELSDSGLLDNQARLQEQYAVTLYRYFADNDAAEALAPLLAQLDS
QLKQLATSTPNTSNDYALLETLKAYGFLLNKSRKDVDGELNKVLLAADLNTPLLEFAASPASIRAESDWPRTNAYWALAL
YRLALPSSEDGEETEQELAVDEAVAAIAKADVTLRGDAAKDAYTAGFHVNVFGGQELCEENSEICRIPELKTALPIEHHC
SDSLFILTQDLNEQELAESCTKLTSQESNFHNVLETKLEPAPNDFNTALRVVAFKNWSQYHLNGQLIFDINTDNGGMYIE
GTPSKPGNQATFFAYRQWWIEPEFKVWNLNHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDNNPSALRVIKR
DIEEAPTLEEIFATEYKDGQDRTYKWSYMAIRFLAENHHTEFVQLSHYLKTDYFEGYDQLMASLTEHQPQFADWLNTQVN
AFNDSEEEAKPRLHKQGRYDYRDYLQPQHLAHGENHLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PKD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013510
- InterPro:   IPR002169
- InterPro:   IPR013661
- InterPro:   IPR022409
- InterPro:   IPR000601 [H]

Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD [H]

EC number: =3.4.24.3 [H]

Molecular weight: Translated: 59304; Mature: 59304

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQCRSTSYYFRAFSYYGPVDDLTDADTVALALTLEELSDSGLLDNQARLQEQYAVTLYR
CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHH
YFADNDAAEALAPLLAQLDSQLKQLATSTPNTSNDYALLETLKAYGFLLNKSRKDVDGEL
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
NKVLLAADLNTPLLEFAASPASIRAESDWPRTNAYWALALYRLALPSSEDGEETEQELAV
CEEEEEECCCCHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
DEAVAAIAKADVTLRGDAAKDAYTAGFHVNVFGGQELCEENSEICRIPELKTALPIEHHC
HHHHHHHHHCCEEEECCCCCCCEECCEEEEECCCHHHHHCCCCEEECCCCHHCCCHHHCC
SDSLFILTQDLNEQELAESCTKLTSQESNFHNVLETKLEPAPNDFNTALRVVAFKNWSQY
CCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHEEEEEECCCCEE
HLNGQLIFDINTDNGGMYIEGTPSKPGNQATFFAYRQWWIEPEFKVWNLNHEYVHYLDGH
EECCEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEHEECCCCEEEEECCHHHHHHHCCC
FVKYAGFGHFPEKMVWWSEGLAEYISKGDNNPSALRVIKRDIEEAPTLEEIFATEYKDGQ
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
DRTYKWSYMAIRFLAENHHTEFVQLSHYLKTDYFEGYDQLMASLTEHQPQFADWLNTQVN
CCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCHHC
AFNDSEEEAKPRLHKQGRYDYRDYLQPQHLAHGENHLKF
CCCCCHHHHCCHHHHCCCCCHHHCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MRQCRSTSYYFRAFSYYGPVDDLTDADTVALALTLEELSDSGLLDNQARLQEQYAVTLYR
CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHH
YFADNDAAEALAPLLAQLDSQLKQLATSTPNTSNDYALLETLKAYGFLLNKSRKDVDGEL
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
NKVLLAADLNTPLLEFAASPASIRAESDWPRTNAYWALALYRLALPSSEDGEETEQELAV
CEEEEEECCCCHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
DEAVAAIAKADVTLRGDAAKDAYTAGFHVNVFGGQELCEENSEICRIPELKTALPIEHHC
HHHHHHHHHCCEEEECCCCCCCEECCEEEEECCCHHHHHCCCCEEECCCCHHCCCHHHCC
SDSLFILTQDLNEQELAESCTKLTSQESNFHNVLETKLEPAPNDFNTALRVVAFKNWSQY
CCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHEEEEEECCCCEE
HLNGQLIFDINTDNGGMYIEGTPSKPGNQATFFAYRQWWIEPEFKVWNLNHEYVHYLDGH
EECCEEEEEEECCCCCEEEEECCCCCCCCCEEEEEEHEECCCCEEEEECCHHHHHHHCCC
FVKYAGFGHFPEKMVWWSEGLAEYISKGDNNPSALRVIKRDIEEAPTLEEIFATEYKDGQ
EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
DRTYKWSYMAIRFLAENHHTEFVQLSHYLKTDYFEGYDQLMASLTEHQPQFADWLNTQVN
CCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHCHHC
AFNDSEEEAKPRLHKQGRYDYRDYLQPQHLAHGENHLKF
CCCCCHHHHCCHHHHCCCCCHHHCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1311172 [H]