| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826337
Identifier: 157826337
GI number: 157826337
Start: 1193016
End: 1193342
Strand: Reverse
Name: 157826337
Synonym: A1C_06630
Alternate gene names: NA
Gene position: 1193342-1193016 (Counterclockwise)
Preceding gene: 157826338
Following gene: 157826335
Centisome position: 96.94
GC content: 33.03
Gene sequence:
>327_bases TTGTCTAAAACAAGCATCAATGGAATTAAATTTTTACAAAATAAAGCAGTAGAAGCTAAATTTGACCGTGACATGTGTTT ATTTACAAATCTAATTTATAAAAATTCTCAAGAAGAGATATTAATAAATTTTGATCATTACGGCAATCATGATGAGGCAG GAAATTTTGCTAATAACCATAAATTAGTAGAAGTACTTGGATATTTAACGATAATATACGGTTGTGTGGGTACCGATGTC ATTCCTGCGAAGCATTGCCAGTGTGGATCAATTTTACCTCTGTCATCCCGTGGTTTGACCACGGTATCCATAAGAAAACA AGTGTGA
Upstream 100 bases:
>100_bases GTTTAAATTGCTTTGCAAAAATTTCTGAAGACATCAAGAAAACATTAGATATTAATTTAATTGATTCTTTTACTCAAGCT ATAGAAAAAGGTATTACATA
Downstream 100 bases:
>100_bases ATCCTGCGATCAAGTCCATAGTACCGGACAATTTTAAAAAGTCCTAGATGTCATTCCTACGGAGGCGGGAATCAATGGCA TAAAGCAAGATTTTAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSKTSINGIKFLQNKAVEAKFDRDMCLFTNLIYKNSQEEILINFDHYGNHDEAGNFANNHKLVEVLGYLTIIYGCVGTDV IPAKHCQCGSILPLSSRGLTTVSIRKQV
Sequences:
>Translated_108_residues MSKTSINGIKFLQNKAVEAKFDRDMCLFTNLIYKNSQEEILINFDHYGNHDEAGNFANNHKLVEVLGYLTIIYGCVGTDV IPAKHCQCGSILPLSSRGLTTVSIRKQV >Mature_107_residues SKTSINGIKFLQNKAVEAKFDRDMCLFTNLIYKNSQEEILINFDHYGNHDEAGNFANNHKLVEVLGYLTIIYGCVGTDVI PAKHCQCGSILPLSSRGLTTVSIRKQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12064; Mature: 11933
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTSINGIKFLQNKAVEAKFDRDMCLFTNLIYKNSQEEILINFDHYGNHDEAGNFANNH CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC KLVEVLGYLTIIYGCVGTDVIPAKHCQCGSILPLSSRGLTTVSIRKQV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEEEECC >Mature Secondary Structure SKTSINGIKFLQNKAVEAKFDRDMCLFTNLIYKNSQEEILINFDHYGNHDEAGNFANNH CCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC KLVEVLGYLTIIYGCVGTDVIPAKHCQCGSILPLSSRGLTTVSIRKQV HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA