| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826335
Identifier: 157826335
GI number: 157826335
Start: 1188374
End: 1189945
Strand: Reverse
Name: 157826335
Synonym: A1C_06620
Alternate gene names: NA
Gene position: 1189945-1188374 (Counterclockwise)
Preceding gene: 157826337
Following gene: 157826334
Centisome position: 96.66
GC content: 24.36
Gene sequence:
>1572_bases ATGATTAAAATAAATTTATTTATGAAAAATATTTTTGATTCGAGCAAATTAGATTTTGTTAATTTTTTAACAAAATTAAA GATATTTTCTTTCAAAAGAAAAAAGATCGTGCTGTTACTAGGTAATCAAGGTGTATTTCTTAGTACTTTTCTTGATAATA AATTATTAGATAAATTATTTATCCCTACTCAGGAACAGATAGACTTAAATCCTTATAAAAACTTTTTTAGTAAATTTCCA AAAAGCGATATTTATTTTTTACTTGACGGTAGCGAATGTAAGACACGGCACGATCAAATACCTGTATTACAGTCGATAGT TAAACTTGATCCTATTGAACAATTTATCGAAGGTTATTTTAATAAAGAAGATATTATAGCACATTGTGTTTACGAAATTA CTACTACACCAAGTGAAATTTGGTCGACTTTAATTATGTCGTGTCCATTTGAAACACTTTTAAGTGATATAATTTCATGC ATTATAGATCAAAGATCGCTTGATTTAAAAGACATTTACTTTTTAACGTTAGAGCTAAAAGTTATTATAAATAAAATAGT TCAGAATATAGAAAATGATAAATATAATGATTATTTCCAAATTTGTGTATATGCATCACAAGCTAGCGGTATAAAATTTA TTATCAAACATAAAAATAATATAATAACAATTAGAAATCTTGAGTATCCATTTGATAAAACAACCGGCTATGTTCAAGGT ATTATAGAACAAGAAATTAATGATTGCTTTATATTATTTAAAAACTATATAAGTAATCTTGACCACAGAGCCTGTATAAT TCTTATAGTAGATGAAGAGTTAAAATCTTTATTAGAATCAACAAATTTTGAAGATTGCCCTGTAATCTTTATACCGGTTG ATAATATACTAAACACGCAAGCTCTAGAAAAAGAAAGATTTATAGATACGAATATTAGTAGGCTGTTTCTAGAATATAAG AGTTTTCCTGCTTATAATAATAATTTAAAATCAATAAAAAAACTAGTTACTATAAAAGATCTGACATTTAAATTATATAA TGCATTACTTATAATATTAATATTAGTGGTTTGTATTATTAAATATAATACAAACCAGAATTACAAAGATATAAACTCTA TTAATGAAAAATATTATGCAACAAACCAAGAATATGATAGTATCAAATATAAATATCCTTATATTAAAAATACTACTAGC ATCGCTGATTTATATGTAATAGGAAAATTACTAGAAACACCTGTACCGCTACCCTTTGATTTGCTTAACAGACTTATAAT TACTTTAAATCCGGCTTTTAAATTAGAAGAAATTAAATGGGAATTAACAAATATAGATAATGTTTTATTAGTTTCTAAGA GACAATTAATAATCAAATTAATACTTAAATATTATACTAATAATCTGTCGATAGATGAATCTCTAAAGCTGCTAGATGAT CATATGCAAAACGTAAAAAATCAATTATCTAATTTGCAGATAGATTATGTTATATATAAGGATAAAATACTTGATATATT CGGTAAGGTAGTAATTCCTTTATCGGTTAATATAGTTGACAATAAGACCTAG
Upstream 100 bases:
>100_bases GTTGGATCTCGCGATCAAGTCGCGGGATGACAACAGAAAATCAGTCCACGCAACAATGTTACGCAGGTCTGACTTTGCAT ATAGTAAAATACACTGAATT
Downstream 100 bases:
>100_bases TATTCTAGGTCATTCCTGCGGAAGCGGGAAGGCATTGTTGTGTGGATATCTCATCGTCATTGCGAGGAGCGAAGCGACGC GGTAATCCAGAAAAAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 523
Protein sequence:
>523_residues MIKINLFMKNIFDSSKLDFVNFLTKLKIFSFKRKKIVLLLGNQGVFLSTFLDNKLLDKLFIPTQEQIDLNPYKNFFSKFP KSDIYFLLDGSECKTRHDQIPVLQSIVKLDPIEQFIEGYFNKEDIIAHCVYEITTTPSEIWSTLIMSCPFETLLSDIISC IIDQRSLDLKDIYFLTLELKVIINKIVQNIENDKYNDYFQICVYASQASGIKFIIKHKNNIITIRNLEYPFDKTTGYVQG IIEQEINDCFILFKNYISNLDHRACIILIVDEELKSLLESTNFEDCPVIFIPVDNILNTQALEKERFIDTNISRLFLEYK SFPAYNNNLKSIKKLVTIKDLTFKLYNALLIILILVVCIIKYNTNQNYKDINSINEKYYATNQEYDSIKYKYPYIKNTTS IADLYVIGKLLETPVPLPFDLLNRLIITLNPAFKLEEIKWELTNIDNVLLVSKRQLIIKLILKYYTNNLSIDESLKLLDD HMQNVKNQLSNLQIDYVIYKDKILDIFGKVVIPLSVNIVDNKT
Sequences:
>Translated_523_residues MIKINLFMKNIFDSSKLDFVNFLTKLKIFSFKRKKIVLLLGNQGVFLSTFLDNKLLDKLFIPTQEQIDLNPYKNFFSKFP KSDIYFLLDGSECKTRHDQIPVLQSIVKLDPIEQFIEGYFNKEDIIAHCVYEITTTPSEIWSTLIMSCPFETLLSDIISC IIDQRSLDLKDIYFLTLELKVIINKIVQNIENDKYNDYFQICVYASQASGIKFIIKHKNNIITIRNLEYPFDKTTGYVQG IIEQEINDCFILFKNYISNLDHRACIILIVDEELKSLLESTNFEDCPVIFIPVDNILNTQALEKERFIDTNISRLFLEYK SFPAYNNNLKSIKKLVTIKDLTFKLYNALLIILILVVCIIKYNTNQNYKDINSINEKYYATNQEYDSIKYKYPYIKNTTS IADLYVIGKLLETPVPLPFDLLNRLIITLNPAFKLEEIKWELTNIDNVLLVSKRQLIIKLILKYYTNNLSIDESLKLLDD HMQNVKNQLSNLQIDYVIYKDKILDIFGKVVIPLSVNIVDNKT >Mature_523_residues MIKINLFMKNIFDSSKLDFVNFLTKLKIFSFKRKKIVLLLGNQGVFLSTFLDNKLLDKLFIPTQEQIDLNPYKNFFSKFP KSDIYFLLDGSECKTRHDQIPVLQSIVKLDPIEQFIEGYFNKEDIIAHCVYEITTTPSEIWSTLIMSCPFETLLSDIISC IIDQRSLDLKDIYFLTLELKVIINKIVQNIENDKYNDYFQICVYASQASGIKFIIKHKNNIITIRNLEYPFDKTTGYVQG IIEQEINDCFILFKNYISNLDHRACIILIVDEELKSLLESTNFEDCPVIFIPVDNILNTQALEKERFIDTNISRLFLEYK SFPAYNNNLKSIKKLVTIKDLTFKLYNALLIILILVVCIIKYNTNQNYKDINSINEKYYATNQEYDSIKYKYPYIKNTTS IADLYVIGKLLETPVPLPFDLLNRLIITLNPAFKLEEIKWELTNIDNVLLVSKRQLIIKLILKYYTNNLSIDESLKLLDD HMQNVKNQLSNLQIDYVIYKDKILDIFGKVVIPLSVNIVDNKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61162; Mature: 61162
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKINLFMKNIFDSSKLDFVNFLTKLKIFSFKRKKIVLLLGNQGVFLSTFLDNKLLDKLF CEEEEEEHHHHCCCCCHHHHHHHHHHHHHEECCCEEEEEECCCCEEEEHHHHHHHHHHHC IPTQEQIDLNPYKNFFSKFPKSDIYFLLDGSECKTRHDQIPVLQSIVKLDPIEQFIEGYF CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHCCCCCCCHHHHHHHHCCHHHHHHHHHC NKEDIIAHCVYEITTTPSEIWSTLIMSCPFETLLSDIISCIIDQRSLDLKDIYFLTLELK CCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHH VIINKIVQNIENDKYNDYFQICVYASQASGIKFIIKHKNNIITIRNLEYPFDKTTGYVQG HHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHH IIEQEINDCFILFKNYISNLDHRACIILIVDEELKSLLESTNFEDCPVIFIPVDNILNTQ HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCCEEEEECCHHHCHH ALEKERFIDTNISRLFLEYKSFPAYNNNLKSIKKLVTIKDLTFKLYNALLIILILVVCII HHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE KYNTNQNYKDINSINEKYYATNQEYDSIKYKYPYIKNTTSIADLYVIGKLLETPVPLPFD EECCCCCHHHHHHHCHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHH LLNRLIITLNPAFKLEEIKWELTNIDNVLLVSKRQLIIKLILKYYTNNLSIDESLKLLDD HHCCEEEEECCCEEEHHHEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH HMQNVKNQLSNLQIDYVIYKDKILDIFGKVVIPLSVNIVDNKT HHHHHHHHHHCEEEEEEEEHHHHHHHHCCEEEEEEEEEECCCC >Mature Secondary Structure MIKINLFMKNIFDSSKLDFVNFLTKLKIFSFKRKKIVLLLGNQGVFLSTFLDNKLLDKLF CEEEEEEHHHHCCCCCHHHHHHHHHHHHHEECCCEEEEEECCCCEEEEHHHHHHHHHHHC IPTQEQIDLNPYKNFFSKFPKSDIYFLLDGSECKTRHDQIPVLQSIVKLDPIEQFIEGYF CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCHHCCCCCCCHHHHHHHHCCHHHHHHHHHC NKEDIIAHCVYEITTTPSEIWSTLIMSCPFETLLSDIISCIIDQRSLDLKDIYFLTLELK CCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHH VIINKIVQNIENDKYNDYFQICVYASQASGIKFIIKHKNNIITIRNLEYPFDKTTGYVQG HHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHH IIEQEINDCFILFKNYISNLDHRACIILIVDEELKSLLESTNFEDCPVIFIPVDNILNTQ HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCCCCEEEEECCHHHCHH ALEKERFIDTNISRLFLEYKSFPAYNNNLKSIKKLVTIKDLTFKLYNALLIILILVVCII HHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE KYNTNQNYKDINSINEKYYATNQEYDSIKYKYPYIKNTTSIADLYVIGKLLETPVPLPFD EECCCCCHHHHHHHCHHHEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHH LLNRLIITLNPAFKLEEIKWELTNIDNVLLVSKRQLIIKLILKYYTNNLSIDESLKLLDD HHCCEEEEECCCEEEHHHEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHH HMQNVKNQLSNLQIDYVIYKDKILDIFGKVVIPLSVNIVDNKT HHHHHHHHHHCEEEEEEEEHHHHHHHHCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]