| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is map [H]
Identifier: 157826292
GI number: 157826292
Start: 1146993
End: 1147784
Strand: Direct
Name: map [H]
Synonym: A1C_06395
Alternate gene names: 157826292
Gene position: 1146993-1147784 (Clockwise)
Preceding gene: 157826279
Following gene: 157826293
Centisome position: 93.17
GC content: 36.36
Gene sequence:
>792_bases ATGACCATAAAAATCCACACGGAACAAGATTTCATAAAGATGCGGCGAGCTGGAAAATTAGCTGCAGAGACGCTTGATTT TATTACTGGTTACGTAAAACCGAACGTCACTACTAATAGTTTAAATAACCTTTGTCATAATTTTATTACTTCTCATAATG CGATTCCTGCACCGTTAAATTATAAAGGCTTTCCGAAATCGATTTGTACTTCTATAAATCATGTGGTTTGTCACGGCATT CCAAACGATAAACCATTAAAAAACGGTGATATAGTAAATATTGATGTTACAGTAATTTTAGACGGTTGGTACGGTGATAC TAGCCGTATGTATTATGTCGGTGACGTAGCAATTAAGCCAAAGCGTCTTATTCAAATAACTTATGATGCAATGATGAAAG GGATTGAAGTAGTTAGACCTGGTGCTAAAATCGGTGATATCGGACATGCGATTCAAAGCTATGCCGAGAAACATAATTAT TCTGTGGTTAGAGATTATACGGGTCACGGTATCGGAAGAGTTTTTCATGACGAGCCGTCAATATTAAATTACGGCCGCAG CGGCACAGGTCTAACGTTAGAAGAAGGGATGTTTTTCACCATTGAACCTATGATAAATGCTGGTCATTATGACACTATAT TAAGTAAACTAGATGGATGGACGGTTACTACGCGTGATAAATCATTATCGGCTCAATTTGAACATACTATAGGTGTGACT AAAAATGGCTTTGAAATATTTACGTTATCACCTAAAAAACTTGATTATCCTCCGTACGAAATTGTAATATAA
Upstream 100 bases:
>100_bases ACAAGCTAATTTAATATGATTCTATAATGTCAACTTTTGAAATTTACACCTTAGAAAAAAATGTTATACTATAAACGATT TTAAAAACTTGCAATATAAC
Downstream 100 bases:
>100_bases AAAGGTACAAGTTGATTGTATGGTTTAGTCGTTTCGTCATTGCGAAAAAAATTACGAAGTAATGTGACGAAGCAATCCAG TAAAAAATTCTGATTTACAG
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTIKIHTEQDFIKMRRAGKLAAETLDFITGYVKPNVTTNSLNNLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGI PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQITYDAMMKGIEVVRPGAKIGDIGHAIQSYAEKHNY SVVRDYTGHGIGRVFHDEPSILNYGRSGTGLTLEEGMFFTIEPMINAGHYDTILSKLDGWTVTTRDKSLSAQFEHTIGVT KNGFEIFTLSPKKLDYPPYEIVI
Sequences:
>Translated_263_residues MTIKIHTEQDFIKMRRAGKLAAETLDFITGYVKPNVTTNSLNNLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGI PNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQITYDAMMKGIEVVRPGAKIGDIGHAIQSYAEKHNY SVVRDYTGHGIGRVFHDEPSILNYGRSGTGLTLEEGMFFTIEPMINAGHYDTILSKLDGWTVTTRDKSLSAQFEHTIGVT KNGFEIFTLSPKKLDYPPYEIVI >Mature_262_residues TIKIHTEQDFIKMRRAGKLAAETLDFITGYVKPNVTTNSLNNLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIP NDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQITYDAMMKGIEVVRPGAKIGDIGHAIQSYAEKHNYS VVRDYTGHGIGRVFHDEPSILNYGRSGTGLTLEEGMFFTIEPMINAGHYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTK NGFEIFTLSPKKLDYPPYEIVI
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=253, Percent_Identity=43.0830039525692, Blast_Score=232, Evalue=3e-61, Organism=Homo sapiens, GI40385867, Length=252, Percent_Identity=40.4761904761905, Blast_Score=201, Evalue=7e-52, Organism=Escherichia coli, GI1786364, Length=251, Percent_Identity=54.5816733067729, Blast_Score=274, Evalue=4e-75, Organism=Caenorhabditis elegans, GI71996291, Length=247, Percent_Identity=41.2955465587045, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6323273, Length=252, Percent_Identity=41.2698412698413, Blast_Score=213, Evalue=4e-56, Organism=Drosophila melanogaster, GI21355531, Length=246, Percent_Identity=45.5284552845528, Blast_Score=225, Evalue=2e-59, Organism=Drosophila melanogaster, GI24583427, Length=245, Percent_Identity=40.8163265306122, Blast_Score=196, Evalue=9e-51,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29367; Mature: 29236
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKIHTEQDFIKMRRAGKLAAETLDFITGYVKPNVTTNSLNNLCHNFITSHNAIPAPLN CEEEEECCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC YKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKP CCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECC KRLIQITYDAMMKGIEVVRPGAKIGDIGHAIQSYAEKHNYSVVRDYTGHGIGRVFHDEPS HHEEEEEHHHHHCCHHEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCC ILNYGRSGTGLTLEEGMFFTIEPMINAGHYDTILSKLDGWTVTTRDKSLSAQFEHTIGVT HHHCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCEEHEEECCC KNGFEIFTLSPKKLDYPPYEIVI CCCEEEEEECCCCCCCCCEEEEC >Mature Secondary Structure TIKIHTEQDFIKMRRAGKLAAETLDFITGYVKPNVTTNSLNNLCHNFITSHNAIPAPLN EEEEECCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC YKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKP CCCCCHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECC KRLIQITYDAMMKGIEVVRPGAKIGDIGHAIQSYAEKHNYSVVRDYTGHGIGRVFHDEPS HHEEEEEHHHHHCCHHEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCC ILNYGRSGTGLTLEEGMFFTIEPMINAGHYDTILSKLDGWTVTTRDKSLSAQFEHTIGVT HHHCCCCCCCEEECCCEEEEEECCCCCCHHHHHHHHCCCCEEEECCCCCCCEEHEEECCC KNGFEIFTLSPKKLDYPPYEIVI CCCEEEEEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]