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The map label for this gene is atpH [H]

Identifier: 157826260

GI number: 157826260

Start: 1115446

End: 1116000

Strand: Reverse

Name: atpH [H]

Synonym: A1C_06205

Alternate gene names: 157826260

Gene position: 1116000-1115446 (Counterclockwise)

Preceding gene: 157826261

Following gene: 157826259

Centisome position: 90.65

GC content: 26.31

Gene sequence:

>555_bases
ATGAACAAAGATAATTTAATCAAGAATTATGCAGTGGCGTTATTTAATAATGCTGTGGTTGATAACATACAAGATAAAAT
CTTTGAAGAAATTACCGCTATAAATCGTATAATTACCGATAATTTTGATATTAGAGAGTTCCTATTTTCTCCTATAGTAA
ATAAGAACGACAAAGTTAACGCAGTAAATTCGTTAGCAAAAAATATCAAAATGAGCACAATAGTACAAAATTTTTTATTG
TTATTGGTAAAAAATTCTCGTACTGCTATTTTATCTAATATAGTAGATACTTATAATGCTTTACTATATGAAAGTAAAAA
CATAAAGATAGTTCGGGTTATTTCTGCAAATAAGTTACAACCTAAAGAGCAGGAGTGGATTAAATCTCGTATAGAAAAAG
AATTAAATCAAAAAACAGAAATATTATTTGATATAGATAGTACTATTATTGGCGGTATTGTAATTAAATATGATAGTATG
CTGCAAGATTACTCAATAAAAGGTAGTTTAGAAAAAATAACGAAAACTTTAAAGAAAGTTAGGATTGCTGCTTGA

Upstream 100 bases:

>100_bases
CAACAGAGTTGGATTTAATTAATACTATCTTCCCACATCCGACTTTATCGGAAATGATGCACGAGTCAGTACTCGCTGCT
TATGATAGGGTAGTACATGT

Downstream 100 bases:

>100_bases
GTACTATTGTCATCCCGTGGCTTGACCACGGGACCCATAAGCAATCTAAAGCTGTATATTATTTGTCATTTTTAACTGGA
TCCCGTGGTCAAGCCACGGG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNKDNLIKNYAVALFNNAVVDNIQDKIFEEITAINRIITDNFDIREFLFSPIVNKNDKVNAVNSLAKNIKMSTIVQNFLL
LLVKNSRTAILSNIVDTYNALLYESKNIKIVRVISANKLQPKEQEWIKSRIEKELNQKTEILFDIDSTIIGGIVIKYDSM
LQDYSIKGSLEKITKTLKKVRIAA

Sequences:

>Translated_184_residues
MNKDNLIKNYAVALFNNAVVDNIQDKIFEEITAINRIITDNFDIREFLFSPIVNKNDKVNAVNSLAKNIKMSTIVQNFLL
LLVKNSRTAILSNIVDTYNALLYESKNIKIVRVISANKLQPKEQEWIKSRIEKELNQKTEILFDIDSTIIGGIVIKYDSM
LQDYSIKGSLEKITKTLKKVRIAA
>Mature_184_residues
MNKDNLIKNYAVALFNNAVVDNIQDKIFEEITAINRIITDNFDIREFLFSPIVNKNDKVNAVNSLAKNIKMSTIVQNFLL
LLVKNSRTAILSNIVDTYNALLYESKNIKIVRVISANKLQPKEQEWIKSRIEKELNQKTEILFDIDSTIIGGIVIKYDSM
LQDYSIKGSLEKITKTLKKVRIAA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Caenorhabditis elegans, GI71984710, Length=165, Percent_Identity=24.8484848484848, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71984717, Length=165, Percent_Identity=24.8484848484848, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647054, Length=164, Percent_Identity=24.390243902439, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 21051; Mature: 21051

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDNLIKNYAVALFNNAVVDNIQDKIFEEITAINRIITDNFDIREFLFSPIVNKNDKVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
AVNSLAKNIKMSTIVQNFLLLLVKNSRTAILSNIVDTYNALLYESKNIKIVRVISANKLQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PKEQEWIKSRIEKELNQKTEILFDIDSTIIGGIVIKYDSMLQDYSIKGSLEKITKTLKKV
CHHHHHHHHHHHHHHCHHHHEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RIAA
HCCC
>Mature Secondary Structure
MNKDNLIKNYAVALFNNAVVDNIQDKIFEEITAINRIITDNFDIREFLFSPIVNKNDKVN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH
AVNSLAKNIKMSTIVQNFLLLLVKNSRTAILSNIVDTYNALLYESKNIKIVRVISANKLQ
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC
PKEQEWIKSRIEKELNQKTEILFDIDSTIIGGIVIKYDSMLQDYSIKGSLEKITKTLKKV
CHHHHHHHHHHHHHHCHHHHEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RIAA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA