| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is mreC [C]
Identifier: 157826220
GI number: 157826220
Start: 1062033
End: 1062872
Strand: Reverse
Name: mreC [C]
Synonym: A1C_05995
Alternate gene names: 157826220
Gene position: 1062872-1062033 (Counterclockwise)
Preceding gene: 157826221
Following gene: 157826219
Centisome position: 86.34
GC content: 29.05
Gene sequence:
>840_bases ATGGCAATACTTGCAAATAGAGTAAAAAATTCTTCAAATTCATTAGAATTAATAAGAATAATATCAAATACTCTTAAGCG TTTTTTTGTTATATTTTGGCTTGGATTGTCTGTATATTTATTTTTTACTACGCCTAAAAAAATATCTAGTATATCACTTG AAGTAACCGGTAGTATAGTATCAACCGGTTTAGCAGTTTATGAAGATATATTTGGATATATAAATTCAATAACACAAAAA TTTGTTTATTTTCAAGATTTAGAACGACAAAATATAGAACTTAAACTTGAAATAGCAAGGTTACAACGTTTGCAAAGTGA AGTAGAATCGGTAAGAGCTGAAAATATTGCATTAAAAGATTTGTTAACGATTGCTGAGGAAGAAGAGTTTGAATACATTA CTGCTAAATTACTTAGTGTTTCCTTTAATCCTTTTTCTAGAACTGCTTTGATTTCTGCAGGTAAAAAGCAAGGCATTGAA CCTGATCAAATCGTGGTTAATTCAAGAAAATTAATAGGAAAAGTAATAGAAGTGAGTAATAATTATGCTAAAGTAATGTT AATTAGCGATATTAATTCTAGAATACCTATTAGAGCTAATTCTTCAAGAGAACAAGGTATTTTAGCAGGTAATAATAATA ATAGTAAAATTTTATACTTGCCTAACAATCACTTAGTACAAAAAGATGAGGAGATAGTAACCTCCGGACACGGTAATATT TATCCTGCAGGTATTTTAGTGGGTTATGTGTCTAAAGTTACGGAACATGATGTTATGGTAAATGTAGCAGCTGATCTATC TAAAACGGAATTTGTGCAAGTATTGTTACCTAAGGAATAA
Upstream 100 bases:
>100_bases TAGTTGCAGATGATGCCCTCTCTTGTGTGGCACTTGGAACAGGAAAAGTACTTGAAGATTTTACAAAGCTAAAACATGTA CTATTTAAACAGGATTAACA
Downstream 100 bases:
>100_bases TGACAAATGGTTATTTGGGCATTATTGCCGAATATATTTGTATAATAATCTATAAATTAAAATTTTATCAAATACTGCAT CATAGAAAACGTTACTATGT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; Rod Shape-Determining Protein Mrec; Cell Shape-Determining Protein; MreC Rod Shape-Determining Protein; Cell Shape-Determining Protein MreC; Rod Shape-Determining MreC Transmembrane Protein; Cell Wall Complex MreBCD Transmembrane Component MreC; MreC Cell Shape-Determining Protein; Cell Shape Determining Protein MreC; Cell Shape Determining Protein; Rod Shape Determining Protein MreC; Cell-Shape Determining Protein MreC
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MAILANRVKNSSNSLELIRIISNTLKRFFVIFWLGLSVYLFFTTPKKISSISLEVTGSIVSTGLAVYEDIFGYINSITQK FVYFQDLERQNIELKLEIARLQRLQSEVESVRAENIALKDLLTIAEEEEFEYITAKLLSVSFNPFSRTALISAGKKQGIE PDQIVVNSRKLIGKVIEVSNNYAKVMLISDINSRIPIRANSSREQGILAGNNNNSKILYLPNNHLVQKDEEIVTSGHGNI YPAGILVGYVSKVTEHDVMVNVAADLSKTEFVQVLLPKE
Sequences:
>Translated_279_residues MAILANRVKNSSNSLELIRIISNTLKRFFVIFWLGLSVYLFFTTPKKISSISLEVTGSIVSTGLAVYEDIFGYINSITQK FVYFQDLERQNIELKLEIARLQRLQSEVESVRAENIALKDLLTIAEEEEFEYITAKLLSVSFNPFSRTALISAGKKQGIE PDQIVVNSRKLIGKVIEVSNNYAKVMLISDINSRIPIRANSSREQGILAGNNNNSKILYLPNNHLVQKDEEIVTSGHGNI YPAGILVGYVSKVTEHDVMVNVAADLSKTEFVQVLLPKE >Mature_278_residues AILANRVKNSSNSLELIRIISNTLKRFFVIFWLGLSVYLFFTTPKKISSISLEVTGSIVSTGLAVYEDIFGYINSITQKF VYFQDLERQNIELKLEIARLQRLQSEVESVRAENIALKDLLTIAEEEEFEYITAKLLSVSFNPFSRTALISAGKKQGIEP DQIVVNSRKLIGKVIEVSNNYAKVMLISDINSRIPIRANSSREQGILAGNNNNSKILYLPNNHLVQKDEEIVTSGHGNIY PAGILVGYVSKVTEHDVMVNVAADLSKTEFVQVLLPKE
Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31255; Mature: 31124
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILANRVKNSSNSLELIRIISNTLKRFFVIFWLGLSVYLFFTTPKKISSISLEVTGSIV CCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHCEEEEEEECHHH STGLAVYEDIFGYINSITQKFVYFQDLERQNIELKLEIARLQRLQSEVESVRAENIALKD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHH LLTIAEEEEFEYITAKLLSVSFNPFSRTALISAGKKQGIEPDQIVVNSRKLIGKVIEVSN HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCHHHCCCCHHHEEECCHHHHHHHHHCCC NYAKVMLISDINSRIPIRANSSREQGILAGNNNNSKILYLPNNHLVQKDEEIVTSGHGNI CEEEEEEEECCCCCCCEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHCCCCCCE YPAGILVGYVSKVTEHDVMVNVAADLSKTEFVQVLLPKE EHHHHHHHHHHHHCCCCEEEEEHHCCCCCCEEEEEECCC >Mature Secondary Structure AILANRVKNSSNSLELIRIISNTLKRFFVIFWLGLSVYLFFTTPKKISSISLEVTGSIV CEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHCEEEEEEECHHH STGLAVYEDIFGYINSITQKFVYFQDLERQNIELKLEIARLQRLQSEVESVRAENIALKD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHH LLTIAEEEEFEYITAKLLSVSFNPFSRTALISAGKKQGIEPDQIVVNSRKLIGKVIEVSN HHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHCHHHCCCCHHHEEECCHHHHHHHHHCCC NYAKVMLISDINSRIPIRANSSREQGILAGNNNNSKILYLPNNHLVQKDEEIVTSGHGNI CEEEEEEEECCCCCCCEEECCCCCCCEEEECCCCCEEEEECCCCCCCCCHHHHCCCCCCE YPAGILVGYVSKVTEHDVMVNVAADLSKTEFVQVLLPKE EHHHHHHHHHHHHCCCCEEEEEHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA