| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826198
Identifier: 157826198
GI number: 157826198
Start: 1046159
End: 1046632
Strand: Direct
Name: 157826198
Synonym: A1C_05875
Alternate gene names: NA
Gene position: 1046159-1046632 (Clockwise)
Preceding gene: 157826190
Following gene: 157826199
Centisome position: 84.98
GC content: 25.53
Gene sequence:
>474_bases ATGAATATTGAATATAAAAAATTTGTGAATGAATATATGTTAGAATTTGTGAAAAAAATTCTAACAAAAATTCAGCATGA AAATTTATATTGGGATCAGTTAATATACATATCATACAAAACCGATAGCCCTGCAGTAATTTTACCTTCAAAAGTTAAAC AGTCATATCCAAAACAGATAACAATAGTACTGCAATATCAGTTTGAAAATTTAATAGTACATGATACCGGTTTTTCCTTA ACGGTAAGTTTTGACGGTGTTAAAGAAATAATTTACGTACCTTTTGATGCACTTATTAGCTTTGTTGATTTCAATAATAA TTACAGCTTAACTTTTAATCAGTCGTTAAATATACAAGAAAATCAACAACATGAAGAGGAAATAAATACTAATAAAAGTT ATAAAACTTCATTATCTCCAAATCAAAATGTTATAATGTTAGATAAGTTTCGTAACTCTTCTAAACCTAGTTAA
Upstream 100 bases:
>100_bases AAACGGTTAATACCGTCATTAAAACTTACAGTGTTTGCTTGCAATGACCTACACTGCTCAAATTAAACTTCGTCGACCCA TTTTTATTTATTTTTCTTTT
Downstream 100 bases:
>100_bases TGCGCATATATGAATTCAAAAGTAGTTATATATACTGATGGTGCATGTGCAGGTAACCCAGGTCCCGGAGGATGGGGGGC TTTATTAAAGTTTAATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNIEYKKFVNEYMLEFVKKILTKIQHENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQITIVLQYQFENLIVHDTGFSL TVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQENQQHEEEINTNKSYKTSLSPNQNVIMLDKFRNSSKPS
Sequences:
>Translated_157_residues MNIEYKKFVNEYMLEFVKKILTKIQHENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQITIVLQYQFENLIVHDTGFSL TVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQENQQHEEEINTNKSYKTSLSPNQNVIMLDKFRNSSKPS >Mature_157_residues MNIEYKKFVNEYMLEFVKKILTKIQHENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQITIVLQYQFENLIVHDTGFSL TVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQENQQHEEEINTNKSYKTSLSPNQNVIMLDKFRNSSKPS
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18494; Mature: 18494
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEYKKFVNEYMLEFVKKILTKIQHENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECHHHHCCCCCEE TIVLQYQFENLIVHDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQE EEEEEEEECEEEEECCCCEEEEEECCCEEEEEECHHHHEEEEECCCCEEEEECCCCCCCC NQQHEEEINTNKSYKTSLSPNQNVIMLDKFRNSSKPS CCHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MNIEYKKFVNEYMLEFVKKILTKIQHENLYWDQLIYISYKTDSPAVILPSKVKQSYPKQI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECHHHHCCCCCEE TIVLQYQFENLIVHDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIQE EEEEEEEECEEEEECCCCEEEEEECCCEEEEEECHHHHEEEEECCCCEEEEECCCCCCCC NQQHEEEINTNKSYKTSLSPNQNVIMLDKFRNSSKPS CCHHHHHHCCCCCEEECCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA