| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826159
Identifier: 157826159
GI number: 157826159
Start: 1011960
End: 1012454
Strand: Reverse
Name: 157826159
Synonym: A1C_05680
Alternate gene names: NA
Gene position: 1012454-1011960 (Counterclockwise)
Preceding gene: 157826160
Following gene: 157826158
Centisome position: 82.24
GC content: 31.52
Gene sequence:
>495_bases ATGAGCGAAGATATAATGTCAAAAGAAAAATTGAATCAGATTAACGATATATCAGAAACAAATAAAGATGGTCCAGAAGA AATTAGAAATAATTTTAAAAAATTTGTACTGAATATATTAGAAACAGAGAATATAACCCCGTATAAGTTAAGTGAAAGAA CAGGTACCCATGAAACAGCGTGGAAAAATTTCCTAGATGGTCGTACAAAAATGCTTGATATGGGAGCAATTGTTGCTCTT GCCGATTATAAAAATGTTTCGCTAGATGAAGTAATAGGAAGAGATATCAATAAAGAAAAAAAGATAACGGTAGAAATGAA ACAAACTCCGGAAATATCCGCAGCCATAACGAAACTATCAAAAGACATACTGCAAGAAGCCATGCTGATAGGAGAAAAAA CTAGAGGATTTATGCATAAACCGACAACTAAAGAAACAAAATCTTTTGCTAAACAAGTTAAAAACTCTAATAAACCGAAA GGAAGGTATATCTAA
Upstream 100 bases:
>100_bases AAATAACTTCATAGATATCCTCTTAAAAATCATAAATGCTTATCATTAAAAAATTATTTTAATTCTCAATTTTTAGGAAT AAAGTTTACAGGAAAAAATA
Downstream 100 bases:
>100_bases ATAAAAATATTTTTTCAATATTGATCCTAATATCAAACCTAAAACCTTATTTGATATTCTAAAATGGAAAATAACTTCAA AACGACCACAATGCCCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSEDIMSKEKLNQINDISETNKDGPEEIRNNFKKFVLNILETENITPYKLSERTGTHETAWKNFLDGRTKMLDMGAIVAL ADYKNVSLDEVIGRDINKEKKITVEMKQTPEISAAITKLSKDILQEAMLIGEKTRGFMHKPTTKETKSFAKQVKNSNKPK GRYI
Sequences:
>Translated_164_residues MSEDIMSKEKLNQINDISETNKDGPEEIRNNFKKFVLNILETENITPYKLSERTGTHETAWKNFLDGRTKMLDMGAIVAL ADYKNVSLDEVIGRDINKEKKITVEMKQTPEISAAITKLSKDILQEAMLIGEKTRGFMHKPTTKETKSFAKQVKNSNKPK GRYI >Mature_163_residues SEDIMSKEKLNQINDISETNKDGPEEIRNNFKKFVLNILETENITPYKLSERTGTHETAWKNFLDGRTKMLDMGAIVALA DYKNVSLDEVIGRDINKEKKITVEMKQTPEISAAITKLSKDILQEAMLIGEKTRGFMHKPTTKETKSFAKQVKNSNKPKG RYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18738; Mature: 18607
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDIMSKEKLNQINDISETNKDGPEEIRNNFKKFVLNILETENITPYKLSERTGTHETA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHH WKNFLDGRTKMLDMGAIVALADYKNVSLDEVIGRDINKEKKITVEMKQTPEISAAITKLS HHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH KDILQEAMLIGEKTRGFMHKPTTKETKSFAKQVKNSNKPKGRYI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEDIMSKEKLNQINDISETNKDGPEEIRNNFKKFVLNILETENITPYKLSERTGTHETA CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHH WKNFLDGRTKMLDMGAIVALADYKNVSLDEVIGRDINKEKKITVEMKQTPEISAAITKLS HHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHH KDILQEAMLIGEKTRGFMHKPTTKETKSFAKQVKNSNKPKGRYI HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA