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The map label for this gene is secY [H]

Identifier: 157826043

GI number: 157826043

Start: 903232

End: 904533

Strand: Reverse

Name: secY [H]

Synonym: A1C_05005

Alternate gene names: 157826043

Gene position: 904533-903232 (Counterclockwise)

Preceding gene: 157826044

Following gene: 157826042

Centisome position: 73.48

GC content: 30.65

Gene sequence:

>1302_bases
ATGGGGAAGAATTTTTCTAAAAAATCCGGTAATGATTTAGTTAGTCGCATTATTTTTACTATTCTCATTCTTATAGTATG
TAGATTTGGATCTTTTATACCTATACCTGGTATAGATTCAATTGCTTTAAGTAGTGTGGCTGCAAAAAATCAATCTGGAA
TACTCGGAATGTTCAACATGCTATCCGGAGGCTCGCTAGGTAGAATGTCTATTTTTGCTTTAGCAATTATGCCGTATATT
ACCGCCTCAATTATTATCCAATTAATGTCAGTTGCCTATAAACCTTTAGAAAATTTAAAAAAAGAAGGCGAAGTTGGTAA
AAGAAAAGTAAATCAGATATCAAGATATTTAACTGTTCTGCTTGCTTCTGTTCAGGCTTATGGAGTTGCTATAAGTTTAG
AGTCGATTGTAACAAATACCGGTCCTGTGGTAATTTTAGCTGGTTTTTTCTTTAGGGTTACAACCGTAATTACTTTAGTT
GTAGGCACTATGCTATTAATGTGGTTAGGCGAACAAATTACACAACGCGGAATAGGTAATGGTACATCTTTAATTATATT
TATAGGTATAATTTCAGGAGTACCTAGTGCTATTATTAGTATGTTTGAATTATCAAGAAAAGGAGTATTATCGCCTTTAA
TAGCGATAGCTGTTTGTATTGGAGTAGTTGTATTAATAGCTATAATTATATTTTTTGAAAAAGCCCAAAGAAAATTATTG
GTGCAGTATCCTAAAAGACAAGTAGGAAATAAAATTTATGGAGGAGAAGCAACTCATATGCCTCTTAAATTAAATACTGC
TGGTGTGATACCTCCAATATTTGCTAGTTCAATCTTACTATTTCCTGCTACGCTTGCTAATTTTTCTAATAGTAATTCAG
AAATTATGGGCATGTTTACTTATTATTTAGGGCATGGAAAACCTGTATATATTTTGTTATATGTAGCATTAATTATGTTT
TTTAGTTTTTTTTATACTGCAATAGTATTTAATTCTGAAGAAACTGCTAATAATTTAAGAAAATATGGTGCTTATATTCC
TGGTAAAAGACCAGGGAAAAATACGTCTGATTATTTTGATTATATACTTACAAGGCTTACGGTTATAGGTGGCATATATT
TAAGTGTAATGTGTGTAATTCCGGAGCTATTAATGAATAAGTATGTAATATCTCTTTCTTTAGGAGGTACAAGTTTTTTA
ATTGTAGTGAACGTGGTACTTGATACTATGACTCAGGTTCAAACTTACTTATTTAGTAGTAAGTATGAAGGTTTAATGAA
GAAAGTAAAATTAAAAAATTAA

Upstream 100 bases:

>100_bases
TAGTGATGATTTCTCTTCTCCTCTATCATTAAAATTAGATGCTTATTCTTCTAAAGCTAAGGATTTAATTAAGAAAGCAG
GTGGGAAATTGTTATAGTAT

Downstream 100 bases:

>100_bases
AAATGAGCTTAAGTAGTGATAGTAATTTTTTTAGGTCCTCCAGGAGCTGGAAAGGGAACACAAGGAAAAAAGATCGCTAA
AAAAATTGATTTACCACATA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MGKNFSKKSGNDLVSRIIFTILILIVCRFGSFIPIPGIDSIALSSVAAKNQSGILGMFNMLSGGSLGRMSIFALAIMPYI
TASIIIQLMSVAYKPLENLKKEGEVGKRKVNQISRYLTVLLASVQAYGVAISLESIVTNTGPVVILAGFFFRVTTVITLV
VGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGVLSPLIAIAVCIGVVVLIAIIIFFEKAQRKLL
VQYPKRQVGNKIYGGEATHMPLKLNTAGVIPPIFASSILLFPATLANFSNSNSEIMGMFTYYLGHGKPVYILLYVALIMF
FSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVMCVIPELLMNKYVISLSLGGTSFL
IVVNVVLDTMTQVQTYLFSSKYEGLMKKVKLKN

Sequences:

>Translated_433_residues
MGKNFSKKSGNDLVSRIIFTILILIVCRFGSFIPIPGIDSIALSSVAAKNQSGILGMFNMLSGGSLGRMSIFALAIMPYI
TASIIIQLMSVAYKPLENLKKEGEVGKRKVNQISRYLTVLLASVQAYGVAISLESIVTNTGPVVILAGFFFRVTTVITLV
VGTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGVLSPLIAIAVCIGVVVLIAIIIFFEKAQRKLL
VQYPKRQVGNKIYGGEATHMPLKLNTAGVIPPIFASSILLFPATLANFSNSNSEIMGMFTYYLGHGKPVYILLYVALIMF
FSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVMCVIPELLMNKYVISLSLGGTSFL
IVVNVVLDTMTQVQTYLFSSKYEGLMKKVKLKN
>Mature_432_residues
GKNFSKKSGNDLVSRIIFTILILIVCRFGSFIPIPGIDSIALSSVAAKNQSGILGMFNMLSGGSLGRMSIFALAIMPYIT
ASIIIQLMSVAYKPLENLKKEGEVGKRKVNQISRYLTVLLASVQAYGVAISLESIVTNTGPVVILAGFFFRVTTVITLVV
GTMLLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGVLSPLIAIAVCIGVVVLIAIIIFFEKAQRKLLV
QYPKRQVGNKIYGGEATHMPLKLNTAGVIPPIFASSILLFPATLANFSNSNSEIMGMFTYYLGHGKPVYILLYVALIMFF
SFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVMCVIPELLMNKYVISLSLGGTSFLI
VVNVVLDTMTQVQTYLFSSKYEGLMKKVKLKN

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=436, Percent_Identity=49.5412844036697, Blast_Score=400, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47322; Mature: 47191

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCC
>Mature Secondary Structure 
GKNFSKKSGNDLVSRIIFTILILIVCRFGSFIPIPGIDSIALSSVAAKNQSGILGMFNM
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
LSGGSLGRMSIFALAIMPYITASIIIQLMSVAYKPLENLKKEGEVGKRKVNQISRYLTVL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LASVQAYGVAISLESIVTNTGPVVILAGFFFRVTTVITLVVGTMLLMWLGEQITQRGIGN
HHHHHHHHHHEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GTSLIIFIGIISGVPSAIISMFELSRKGVLSPLIAIAVCIGVVVLIAIIIFFEKAQRKLL
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQYPKRQVGNKIYGGEATHMPLKLNTAGVIPPIFASSILLFPATLANFSNSNSEIMGMFT
HHCCHHHHCCEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
YYLGHGKPVYILLYVALIMFFSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFD
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
YILTRLTVIGGIYLSVMCVIPELLMNKYVISLSLGGTSFLIVVNVVLDTMTQVQTYLFSS
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
KYEGLMKKVKLKN
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA