| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825976
Identifier: 157825976
GI number: 157825976
Start: 832750
End: 833955
Strand: Reverse
Name: 157825976
Synonym: A1C_04610
Alternate gene names: NA
Gene position: 833955-832750 (Counterclockwise)
Preceding gene: 157825980
Following gene: 157825974
Centisome position: 67.74
GC content: 31.84
Gene sequence:
>1206_bases ATGAAATTAAATAAATTAAATTTAACTATTGCGGCTTGTTTTTTGTATTCATCAACAGTATTGGCAACTACATCAAATAT TGATGACGATATGGCAATTCAAGAAAATTCTAAAAAAAGTTATAGCTATATAGTTACTTATGATAAAGATATGTCCTCAA GAGCGAGTAGCGATGCTGCTATGTCATTACTTGAAGGTTACCGTCAATTAGATGATGCTATATTTGCCGATTCAGATCAT ATCGCTATGAATATATTAAGTTATATTACAAGATTTACTGCTGCATCTTGGATTATGGTAGGTAATCATGAAATAGGAGG TCATGGAGCAAGAGCAAGAGAATTTGATTTAAAAGTAACAAAATATGAAGTAGGTCCTTTTAGTGGTACAACACATTTGA AAGTTAACAATCTTAATGCTTTTCAAGTTCATAAGCGCATTGCTGTAGATACAGGTGGGGTTCAAGCAAGCTATTTGTTA TCTGAAAATATTAAAGATAGATATATGACAAGTAACAAAATTAACCCTACTTACGGTATAGGTTATTTAGTCGCAAGACT AGATCAAGCAGTTTATATTTTTAGTACTAAGTTTAACGCTAAAGATAAAGACGGTAATGATATGAATGCATATGTAAAAG TGATTAACTCCATATACGGTGAAAATTATATTACTAAAAATAAACTTCGTTCATATGCTTGTTTAGATTTATTTGATCCG TTTTTATTCTATTCAGGATATTCATTTATAATGAATCAAGATCTTAATAATATTCCAATGTTTGAGTTGGGAGAAGTGAA ATATTTACCTGCGACCAGAGCGATACTTGCTCCATACGGTTTAGAGCGTGGTTTAGTTAACCATTTTGTTGTTGATAATA AATATATTCAAGTTAATATTAATTACGGCAAAAATCAGAAATTTAAGTCTTACGGTGTTGGGGTTAAAGCAAATCAATTG ATCGAATTCGATTTTGGCGGTTTAGGTTTAGAAGCTGCATTTTGGAATCAGCCTAAAATGTTAACCGCTACTCCTTTAAA AGAGAGCTGTAAACAAGGTGGATTTGGGGCAGTTAATTTTGAGCTTAGCTTAAATGAAACATTTAAGATAGTTGGCTCAG GCGGCTACAAAACAGCTGGTTTTCTAGAAGGTATGCCTTTGAAATCCTCAGCTATTCTTAGAGCAGGGTTAAAATTAGAT TTATAA
Upstream 100 bases:
>100_bases TCAAGGACATACAAAAGTTTGGTATGTTAAAAAAATACTTTACAAATTTAAAAATAGTATATATCGTGGCTACTTACGAT TAACAAAAATTAATAATACT
Downstream 100 bases:
>100_bases GCATTGCAAAAAACATCATTGTGAAGCGGCGTTGCCAGCGTGGATATCGCTCCGTCATTACGAGCGACTAAAAGGAGCGT GGTAATCCAGTAAAAATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKLNKLNLTIAACFLYSSTVLATTSNIDDDMAIQENSKKSYSYIVTYDKDMSSRASSDAAMSLLEGYRQLDDAIFADSDH IAMNILSYITRFTAASWIMVGNHEIGGHGARAREFDLKVTKYEVGPFSGTTHLKVNNLNAFQVHKRIAVDTGGVQASYLL SENIKDRYMTSNKINPTYGIGYLVARLDQAVYIFSTKFNAKDKDGNDMNAYVKVINSIYGENYITKNKLRSYACLDLFDP FLFYSGYSFIMNQDLNNIPMFELGEVKYLPATRAILAPYGLERGLVNHFVVDNKYIQVNINYGKNQKFKSYGVGVKANQL IEFDFGGLGLEAAFWNQPKMLTATPLKESCKQGGFGAVNFELSLNETFKIVGSGGYKTAGFLEGMPLKSSAILRAGLKLD L
Sequences:
>Translated_401_residues MKLNKLNLTIAACFLYSSTVLATTSNIDDDMAIQENSKKSYSYIVTYDKDMSSRASSDAAMSLLEGYRQLDDAIFADSDH IAMNILSYITRFTAASWIMVGNHEIGGHGARAREFDLKVTKYEVGPFSGTTHLKVNNLNAFQVHKRIAVDTGGVQASYLL SENIKDRYMTSNKINPTYGIGYLVARLDQAVYIFSTKFNAKDKDGNDMNAYVKVINSIYGENYITKNKLRSYACLDLFDP FLFYSGYSFIMNQDLNNIPMFELGEVKYLPATRAILAPYGLERGLVNHFVVDNKYIQVNINYGKNQKFKSYGVGVKANQL IEFDFGGLGLEAAFWNQPKMLTATPLKESCKQGGFGAVNFELSLNETFKIVGSGGYKTAGFLEGMPLKSSAILRAGLKLD L >Mature_401_residues MKLNKLNLTIAACFLYSSTVLATTSNIDDDMAIQENSKKSYSYIVTYDKDMSSRASSDAAMSLLEGYRQLDDAIFADSDH IAMNILSYITRFTAASWIMVGNHEIGGHGARAREFDLKVTKYEVGPFSGTTHLKVNNLNAFQVHKRIAVDTGGVQASYLL SENIKDRYMTSNKINPTYGIGYLVARLDQAVYIFSTKFNAKDKDGNDMNAYVKVINSIYGENYITKNKLRSYACLDLFDP FLFYSGYSFIMNQDLNNIPMFELGEVKYLPATRAILAPYGLERGLVNHFVVDNKYIQVNINYGKNQKFKSYGVGVKANQL IEFDFGGLGLEAAFWNQPKMLTATPLKESCKQGGFGAVNFELSLNETFKIVGSGGYKTAGFLEGMPLKSSAILRAGLKLD L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44645; Mature: 44645
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKLNLTIAACFLYSSTVLATTSNIDDDMAIQENSKKSYSYIVTYDKDMSSRASSDAA CCCEEEEHEEEEEEHHCCEEEEEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCHHHH MSLLEGYRQLDDAIFADSDHIAMNILSYITRFTAASWIMVGNHEIGGHGARAREFDLKVT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECEEECCCCCCCEEEEEEEE KYEVGPFSGTTHLKVNNLNAFQVHKRIAVDTGGVQASYLLSENIKDRYMTSNKINPTYGI EEECCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEEHHCCCHHHHCCCCCCCCCHHH GYLVARLDQAVYIFSTKFNAKDKDGNDMNAYVKVINSIYGENYITKNKLRSYACLDLFDP HHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH FLFYSGYSFIMNQDLNNIPMFELGEVKYLPATRAILAPYGLERGLVNHFVVDNKYIQVNI HHHHCCCCEEEECCCCCCCCEEECCEEECCCCHHHHCCCCHHHCCHHHEEECCEEEEEEE NYGKNQKFKSYGVGVKANQLIEFDFGGLGLEAAFWNQPKMLTATPLKESCKQGGFGAVNF ECCCCCCCHHHCCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCHHHHHHCCCCEEEEE ELSLNETFKIVGSGGYKTAGFLEGMPLKSSAILRAGLKLDL EEECCCEEEEEECCCCCCCHHCCCCCCCCHHHHHCCCEECC >Mature Secondary Structure MKLNKLNLTIAACFLYSSTVLATTSNIDDDMAIQENSKKSYSYIVTYDKDMSSRASSDAA CCCEEEEHEEEEEEHHCCEEEEEECCCCCCCEECCCCCCCEEEEEEECCCCCCCCCHHHH MSLLEGYRQLDDAIFADSDHIAMNILSYITRFTAASWIMVGNHEIGGHGARAREFDLKVT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCEEEEEECEEECCCCCCCEEEEEEEE KYEVGPFSGTTHLKVNNLNAFQVHKRIAVDTGGVQASYLLSENIKDRYMTSNKINPTYGI EEECCCCCCEEEEEEECCCCEEEEEEEEEECCCCEEEEEHHCCCHHHHCCCCCCCCCHHH GYLVARLDQAVYIFSTKFNAKDKDGNDMNAYVKVINSIYGENYITKNKLRSYACLDLFDP HHHHHHHCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH FLFYSGYSFIMNQDLNNIPMFELGEVKYLPATRAILAPYGLERGLVNHFVVDNKYIQVNI HHHHCCCCEEEECCCCCCCCEEECCEEECCCCHHHHCCCCHHHCCHHHEEECCEEEEEEE NYGKNQKFKSYGVGVKANQLIEFDFGGLGLEAAFWNQPKMLTATPLKESCKQGGFGAVNF ECCCCCCCHHHCCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCHHHHHHCCCCEEEEE ELSLNETFKIVGSGGYKTAGFLEGMPLKSSAILRAGLKLDL EEECCCEEEEEECCCCCCCHHCCCCCCCCHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA