| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825938
Identifier: 157825938
GI number: 157825938
Start: 790891
End: 791412
Strand: Reverse
Name: 157825938
Synonym: A1C_04390
Alternate gene names: NA
Gene position: 791412-790891 (Counterclockwise)
Preceding gene: 157825939
Following gene: 157825937
Centisome position: 64.29
GC content: 23.18
Gene sequence:
>522_bases ATGTTAAAGATAAAACAGGACATATATAAAAATAGCTTACAAGTAATATTAAAATTGCTGTTTGCTTTTCTATGTTTTTT TATAATATTATTTCCGTTAGTGAGTTATAAAATAAATAGCCAAAGCAGAATTTGTCCGGCAATGGAAATTATGTTTATTT ATTATTTCATGTCTTTATATTCCTTAAATATTTTTAGCATATTTTTCCTCGGTCTATTGATAGATCAAGTAAGCGGTATG CCTATCGGTACAAATTCGTTAGTTTTTTTATCGGCATATATAATATATAAACTCTTTGTAAAATTTTTTATAGCTAAAAA CTATTGGATAAATTTTGTTGTTTTTTGTGTTTATTGTTTATTTATATTGAATTTTAAATATTTATTAATAACGATCAAGA AGCTAGAAGCAGACGGATATTTAATAATTTGCTTTCAATTTTTAACAACTATATTTTCTTACAATATAATGCGTCTTATA CTTGATTCTCCTATGAATTACTTTAAAAAGTATGCTAAATAA
Upstream 100 bases:
>100_bases ACCATATAAAATGTTGTTTATATGGATTCCGCGATCAGGTCGCGGAATGATAACTAATTATAGTATAACACAGTACAAAA TACATAACAACAAACTATTC
Downstream 100 bases:
>100_bases AAAAATACTACATGGTGAGTTAATTTCACGAAGGGCCTTTATAATCGGGTTAGGTAAACTCGGATTTTTATCACTGCTTG GAATAAGAATGTTTTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MLKIKQDIYKNSLQVILKLLFAFLCFFIILFPLVSYKINSQSRICPAMEIMFIYYFMSLYSLNIFSIFFLGLLIDQVSGM PIGTNSLVFLSAYIIYKLFVKFFIAKNYWINFVVFCVYCLFILNFKYLLITIKKLEADGYLIICFQFLTTIFSYNIMRLI LDSPMNYFKKYAK
Sequences:
>Translated_173_residues MLKIKQDIYKNSLQVILKLLFAFLCFFIILFPLVSYKINSQSRICPAMEIMFIYYFMSLYSLNIFSIFFLGLLIDQVSGM PIGTNSLVFLSAYIIYKLFVKFFIAKNYWINFVVFCVYCLFILNFKYLLITIKKLEADGYLIICFQFLTTIFSYNIMRLI LDSPMNYFKKYAK >Mature_173_residues MLKIKQDIYKNSLQVILKLLFAFLCFFIILFPLVSYKINSQSRICPAMEIMFIYYFMSLYSLNIFSIFFLGLLIDQVSGM PIGTNSLVFLSAYIIYKLFVKFFIAKNYWINFVVFCVYCLFILNFKYLLITIKKLEADGYLIICFQFLTTIFSYNIMRLI LDSPMNYFKKYAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20597; Mature: 20597
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIKQDIYKNSLQVILKLLFAFLCFFIILFPLVSYKINSQSRICPAMEIMFIYYFMSLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SLNIFSIFFLGLLIDQVSGMPIGTNSLVFLSAYIIYKLFVKFFIAKNYWINFVVFCVYCL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILNFKYLLITIKKLEADGYLIICFQFLTTIFSYNIMRLILDSPMNYFKKYAK HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKIKQDIYKNSLQVILKLLFAFLCFFIILFPLVSYKINSQSRICPAMEIMFIYYFMSLY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SLNIFSIFFLGLLIDQVSGMPIGTNSLVFLSAYIIYKLFVKFFIAKNYWINFVVFCVYCL HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILNFKYLLITIKKLEADGYLIICFQFLTTIFSYNIMRLILDSPMNYFKKYAK HHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]