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The map label for this gene is yrbH [C]

Identifier: 157825780

GI number: 157825780

Start: 640000

End: 640959

Strand: Reverse

Name: yrbH [C]

Synonym: A1C_03555

Alternate gene names: 157825780

Gene position: 640959-640000 (Counterclockwise)

Preceding gene: 157825781

Following gene: 157825779

Centisome position: 52.07

GC content: 32.5

Gene sequence:

>960_bases
ATGAACCACACAAATAATTACCAAATCATCGCAAAGAGGGTTATTTCTAGTGCAGCAAGTGCTTTAGAAAAATTATCTAA
AAATATCCCTGAAGACTTCAGCAGGATTATAGAATTTTTATTATCTTTCAAAGGACGGATAATCCTAACCGGCATAGGCA
AAAGCGGTTATATTGCAAGAAAAATAGCTGCTAGCTTTTCTTCAACTGGTATGCCTGCTTTTTATTTACATCCGGCAGAA
GCAAGTCACGGTGATTTAGGTATGGTTACAAGACATGATCTGGTAATTATGCTATCTAATTCCGGTGAAACTAAAGAACT
ATTTAATGTGGTTGAATATTGTAAAAACTTTTCCATAAAAATTGCTGCAATGACAATGGATAAAAATTCCACTTTAGCTA
AAAGAAGCGATTTTTTATTAATAGTACCTGAGCACCCGGAAGCTTCTTTAATTGGAGCTCCTACTATATCATCTTTAATA
ATGTTATCACTGGGTGATGCTTTAATAACTGTTATACATGAACAACGAGGCTTTACTAAAGATGATTTTAAAATTTATCA
TCCAGGAGGTATAATCGGTGCTAACTTAACAAAAATTAAAAACCTAATGCGTAGCGGTGATGAAATACCTTTAGTATATG
AAGATACGTCCTTTGCCGACACTATAATTATTATGAATAAAAAACGTTTAGGTTGTACACTTGTCACGGATAAAAACCAA
AATTTGATAGGGATTATAACCGATGGGGATTTACGTCGTCATATTAACGATCAAATCCACTTAAAAACAGCATCAAGTGT
TATGACCAAAAATCCTATTTATATCTCATCGGAAATATTTGCAAAAGAGGCTTTAAATTTAATGCAAGCCAAAAATATCA
CTAATATACCAATTGTTGATGATAATATTATTATAGGCATTATTCATATTCATGATTTGCTACGTATGGGAGTTAGCTAA

Upstream 100 bases:

>100_bases
GCGGGCATGACATCGGTCTTAATACAAAAATAGCATACAATGATCTATACAACAAAGCCTTTAATTGCTCGCAATTGCGA
TTTTCACAAATGAGCACATA

Downstream 100 bases:

>100_bases
AATCTATGCCTTCTTTTTATAAACGGCGAAAAAAAATTTGGAAATCTCTATATCTTTTAATAATAGTTGGAATTTTTTAT
ATAGGATATATATTAATTAA

Product: KpsF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNHTNNYQIIAKRVISSAASALEKLSKNIPEDFSRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAE
ASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSIKIAAMTMDKNSTLAKRSDFLLIVPEHPEASLIGAPTISSLI
MLSLGDALITVIHEQRGFTKDDFKIYHPGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDKNQ
NLIGIITDGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNITNIPIVDDNIIIGIIHIHDLLRMGVS

Sequences:

>Translated_319_residues
MNHTNNYQIIAKRVISSAASALEKLSKNIPEDFSRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAE
ASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSIKIAAMTMDKNSTLAKRSDFLLIVPEHPEASLIGAPTISSLI
MLSLGDALITVIHEQRGFTKDDFKIYHPGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDKNQ
NLIGIITDGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNITNIPIVDDNIIIGIIHIHDLLRMGVS
>Mature_319_residues
MNHTNNYQIIAKRVISSAASALEKLSKNIPEDFSRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPAFYLHPAE
ASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSIKIAAMTMDKNSTLAKRSDFLLIVPEHPEASLIGAPTISSLI
MLSLGDALITVIHEQRGFTKDDFKIYHPGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDKNQ
NLIGIITDGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNITNIPIVDDNIIIGIIHIHDLLRMGVS

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=317, Percent_Identity=40.3785488958991, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87082151, Length=299, Percent_Identity=37.123745819398, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35223; Mature: 35223

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTNNYQIIAKRVISSAASALEKLSKNIPEDFSRIIEFLLSFKGRIILTGIGKSGYIAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
KIAASFSSTGMPAFYLHPAEASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSIK
HHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHCCCCEE
IAAMTMDKNSTLAKRSDFLLIVPEHPEASLIGAPTISSLIMLSLGDALITVIHEQRGFTK
EEEEEECCCCCCCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DDFKIYHPGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDKNQ
CCCEEECCCCEECCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCC
NLIGIITDGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNITNIPIVD
CEEEEEECCHHHHHCCCEEEEEEHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEC
DNIIIGIIHIHDLLRMGVS
CCEEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MNHTNNYQIIAKRVISSAASALEKLSKNIPEDFSRIIEFLLSFKGRIILTGIGKSGYIAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
KIAASFSSTGMPAFYLHPAEASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSIK
HHHHHHCCCCCCEEEEECCCCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHCCCCEE
IAAMTMDKNSTLAKRSDFLLIVPEHPEASLIGAPTISSLIMLSLGDALITVIHEQRGFTK
EEEEEECCCCCCCCCCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCCCCC
DDFKIYHPGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDKNQ
CCCEEECCCCEECCCHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCC
NLIGIITDGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNITNIPIVD
CEEEEEECCHHHHHCCCEEEEEEHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEC
DNIIIGIIHIHDLLRMGVS
CCEEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]