| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is ptlG [H]
Identifier: 157825512
GI number: 157825512
Start: 385779
End: 387233
Strand: Direct
Name: ptlG [H]
Synonym: A1C_02065
Alternate gene names: 157825512
Gene position: 385779-387233 (Clockwise)
Preceding gene: 157825511
Following gene: 157825513
Centisome position: 31.34
GC content: 39.86
Gene sequence:
>1455_bases ATGGCTGAAGAGCAAAATAATAACGATAATAATAATAGCGGTTCTTTATCAGGAGCAGATGCTCCTGAAGTACAAAGAGA ATTATCAAAAGTTTCGGTTGGCTTTAATAAGAGTATTGCGATAGTAGTCGTAATTTGCGGTATTTTTATCTATATTTTTT ATACTCTTTTTTTCGCTACTACAAAAGAAGAAATCCCAGAGACTCAAGTGCCGACTAATATTGTAAAACCTGTTACTGAT GTTGATGATAATATTCCGGAGATTCCAAAGTTACCTGATCCGCCTAAGCTTGAGACGCCTACTGCTCCTCCACCACCACC TCCTCCGGTAGTAGAAGTTCCGCCGGTCTTGCCTCCGACTACTCCTGTGGAAGGTAAGACAGACAAAACGCTTCCATTGC CGCCGGTTTCGTTGCCTTCCACTTCAGGAACATTAGTTGAGAGTGATGCAGAGAAGAAACGTCGTGAAGCAAAAAGAAAA TCAGCTATAGTGTTAGTTGCTGGTGTAGAGCCTAAAAAAACACCGGAACAGATTACAGCAGAAGCGACATTTAAAGATCG CGGTGATATGTCTTTGGTTCTCGGACGCGGTAAATTAATTGATGCAGTACTTGAGACGGCAATAAATAGTGATCTCGGCG GTGAAATAAGAGCCATTATTAGTAGAGACGTATTTTCTGAGCAAGATAAAGTTATATTGATACCGAAAGGATCAAAAATA TTCGGTAAATATGCAACCTCAACGTCGTCAGACAGTTACGGTAGAGTTTCTGTAATATGGGATAGAATTGATTTAACTAA CGGTTATACTATAGAATTCGACTCACCTGCAGTTGATAATTTAGGTAGACCAGGACTACAAGGGAGAGTTGATAATAAAT ATAAAGAACAATTTGCAAATGCCGTATTACAATCCGGCTTTAATATAGGTCTTGCTAAAGTCCTTGATAGGTTAGTGCCG CCTCCTATAGATTCGCAGGCAGCAGCTACCAATACTGCTACGGCAACGCAATTGTTAAATACTACTCAAACTATTGCGTC TAATACCGCTATGGATGCAAATACTAGGATAGTTACAATTTGTACTAATATACTTGCTGCTATTACCGATAAGACTTCGA CTGCTTATACTACTATGACTCAAGCATGTACAACAGCACAGAATGCTTCTTCAGCGAATACTGCTGAGCAGAGACTTCAA ACCTTAGTACAGGCAGTTAATACGGCGGCTTCAAGTTTGCTTACTACTACCTCTATAGCATCAACTCCGACGCAAGCACA ACAAGCTTCCACTCAAGCTTTTGCGGATGTGACGAATGTTGTACAAAATATGATAACTCAGCAGCAGTTCAAGCCGACGA CAACGGTTAATCAAGGTACGCCGGTTAGAATATACGTTAATAAGGATTATAAATTTCCAAAAGCCGTTTTATTAAAATCG AAGGTAATGCAATGA
Upstream 100 bases:
>100_bases CTTATGTCATTCCCGCGTAGGCGGGAATGACATCTGGTAGTTTGCGATCCACGCGGGCAATGACAATAAAAACACTTTAA CTAATATAATTTAGATAGAT
Downstream 100 bases:
>100_bases ATGAAGAATTTGCAGCTTTAGAGACGTTTTTACTTCCTTTTAAAAATTTATTTGCTGAAGACGGTATTAACGAGATTATG GTTAATAAGCCTGGAGAAGT
Product: virB10 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MAEEQNNNDNNNSGSLSGADAPEVQRELSKVSVGFNKSIAIVVVICGIFIYIFYTLFFATTKEEIPETQVPTNIVKPVTD VDDNIPEIPKLPDPPKLETPTAPPPPPPPVVEVPPVLPPTTPVEGKTDKTLPLPPVSLPSTSGTLVESDAEKKRREAKRK SAIVLVAGVEPKKTPEQITAEATFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEQDKVILIPKGSKI FGKYATSTSSDSYGRVSVIWDRIDLTNGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIGLAKVLDRLVP PPIDSQAAATNTATATQLLNTTQTIASNTAMDANTRIVTICTNILAAITDKTSTAYTTMTQACTTAQNASSANTAEQRLQ TLVQAVNTAASSLLTTTSIASTPTQAQQASTQAFADVTNVVQNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKS KVMQ
Sequences:
>Translated_484_residues MAEEQNNNDNNNSGSLSGADAPEVQRELSKVSVGFNKSIAIVVVICGIFIYIFYTLFFATTKEEIPETQVPTNIVKPVTD VDDNIPEIPKLPDPPKLETPTAPPPPPPPVVEVPPVLPPTTPVEGKTDKTLPLPPVSLPSTSGTLVESDAEKKRREAKRK SAIVLVAGVEPKKTPEQITAEATFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEQDKVILIPKGSKI FGKYATSTSSDSYGRVSVIWDRIDLTNGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIGLAKVLDRLVP PPIDSQAAATNTATATQLLNTTQTIASNTAMDANTRIVTICTNILAAITDKTSTAYTTMTQACTTAQNASSANTAEQRLQ TLVQAVNTAASSLLTTTSIASTPTQAQQASTQAFADVTNVVQNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKS KVMQ >Mature_483_residues AEEQNNNDNNNSGSLSGADAPEVQRELSKVSVGFNKSIAIVVVICGIFIYIFYTLFFATTKEEIPETQVPTNIVKPVTDV DDNIPEIPKLPDPPKLETPTAPPPPPPPVVEVPPVLPPTTPVEGKTDKTLPLPPVSLPSTSGTLVESDAEKKRREAKRKS AIVLVAGVEPKKTPEQITAEATFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEQDKVILIPKGSKIF GKYATSTSSDSYGRVSVIWDRIDLTNGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFANAVLQSGFNIGLAKVLDRLVPP PIDSQAAATNTATATQLLNTTQTIASNTAMDANTRIVTICTNILAAITDKTSTAYTTMTQACTTAQNASSANTAEQRLQT LVQAVNTAASSLLTTTSIASTPTQAQQASTQAFADVTNVVQNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKSK VMQ
Specific function: Unknown
COG id: COG2948
COG function: function code U; Type IV secretory pathway, VirB10 components
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trbI/virB10 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005498 [H]
Pfam domain/function: PF03743 TrbI [H]
EC number: NA
Molecular weight: Translated: 51947; Mature: 51816
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEQNNNDNNNSGSLSGADAPEVQRELSKVSVGFNKSIAIVVVICGIFIYIFYTLFFAT CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TKEEIPETQVPTNIVKPVTDVDDNIPEIPKLPDPPKLETPTAPPPPPPPVVEVPPVLPPT HHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC TPVEGKTDKTLPLPPVSLPSTSGTLVESDAEKKRREAKRKSAIVLVAGVEPKKTPEQITA CCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHEE EATFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEQDKVILIPKGSKI ECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCE FGKYATSTSSDSYGRVSVIWDRIDLTNGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFAN EEECCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHH AVLQSGFNIGLAKVLDRLVPPPIDSQAAATNTATATQLLNTTQTIASNTAMDANTRIVTI HHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHH CTNILAAITDKTSTAYTTMTQACTTAQNASSANTAEQRLQTLVQAVNTAASSLLTTTSIA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC STPTQAQQASTQAFADVTNVVQNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH KVMQ HHCC >Mature Secondary Structure AEEQNNNDNNNSGSLSGADAPEVQRELSKVSVGFNKSIAIVVVICGIFIYIFYTLFFAT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH TKEEIPETQVPTNIVKPVTDVDDNIPEIPKLPDPPKLETPTAPPPPPPPVVEVPPVLPPT HHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC TPVEGKTDKTLPLPPVSLPSTSGTLVESDAEKKRREAKRKSAIVLVAGVEPKKTPEQITA CCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHEE EATFKDRGDMSLVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEQDKVILIPKGSKI ECCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCE FGKYATSTSSDSYGRVSVIWDRIDLTNGYTIEFDSPAVDNLGRPGLQGRVDNKYKEQFAN EEECCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHH AVLQSGFNIGLAKVLDRLVPPPIDSQAAATNTATATQLLNTTQTIASNTAMDANTRIVTI HHHHCCCCCCHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHH CTNILAAITDKTSTAYTTMTQACTTAQNASSANTAEQRLQTLVQAVNTAASSLLTTTSIA HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC STPTQAQQASTQAFADVTNVVQNMITQQQFKPTTTVNQGTPVRIYVNKDYKFPKAVLLKS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHH KVMQ HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12910271; 3584073 [H]