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The map label for this gene is hspC1 [H]

Identifier: 157825492

GI number: 157825492

Start: 367381

End: 367872

Strand: Direct

Name: hspC1 [H]

Synonym: A1C_01965

Alternate gene names: 157825492

Gene position: 367381-367872 (Clockwise)

Preceding gene: 157825491

Following gene: 157825494

Centisome position: 29.84

GC content: 26.63

Gene sequence:

>492_bases
ATGTTAAAATATATTCCGGCTATAGGAGCTGTTATTTTATCTAGTAATATTGCAATCGCTAATAAGAATTATGATTCCAG
TAGTGCAATGCCGCTGCGTCAGGTAGCAGATTTAATAGATAATCACATTACAAATATTGATCATTTATTTAAAAATAGAT
TACCGTTTTATGAGTCTAATAGTATAAAAAGCAATTTGATTACTAAAGATAAGCAGTATATTATTATTATGGAAGTACCT
GGCTTTGATAAAAGTCAAATTAAGGTTAAAGTGAACGGCAATAGATTATTTATTACAGGGAATATAGAAGCAAAAAATAA
AACTGATTATTCAGATAATTATATGAATAAAAATTTTAATTATGTAATATCATTATATGAAGATGTAGATCAGAAAAATA
TCTCTTCAAACCTTAAGAATGGAATACTTACTATTATTCTACCTCGTACTGAGATTAAAGAACAAGAAGCAAGAGAGATA
CCGATTAATTAA

Upstream 100 bases:

>100_bases
GCAGCGTACTTTTAGCAAATTATTGAAGTATAAGACTTGAATTTTAAATAGATAATGTTATATATTTAAATATATAACTA
ATAAATGTGGAGATAGTACT

Downstream 100 bases:

>100_bases
TTGGCATTTAATTTTTCTGAAACAAACCCTTTCTCTACATGGTTAGGTAATTTGAGCAATGCTTGTTTTAAGTCGTTATA
AGTGCCTGGGGTTTCAAATT

Product: heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MLKYIPAIGAVILSSNIAIANKNYDSSSAMPLRQVADLIDNHITNIDHLFKNRLPFYESNSIKSNLITKDKQYIIIMEVP
GFDKSQIKVKVNGNRLFITGNIEAKNKTDYSDNYMNKNFNYVISLYEDVDQKNISSNLKNGILTIILPRTEIKEQEAREI
PIN

Sequences:

>Translated_163_residues
MLKYIPAIGAVILSSNIAIANKNYDSSSAMPLRQVADLIDNHITNIDHLFKNRLPFYESNSIKSNLITKDKQYIIIMEVP
GFDKSQIKVKVNGNRLFITGNIEAKNKTDYSDNYMNKNFNYVISLYEDVDQKNISSNLKNGILTIILPRTEIKEQEAREI
PIN
>Mature_163_residues
MLKYIPAIGAVILSSNIAIANKNYDSSSAMPLRQVADLIDNHITNIDHLFKNRLPFYESNSIKSNLITKDKQYIIIMEVP
GFDKSQIKVKVNGNRLFITGNIEAKNKTDYSDNYMNKNFNYVISLYEDVDQKNISSNLKNGILTIILPRTEIKEQEAREI
PIN

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 18612; Mature: 18612

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKYIPAIGAVILSSNIAIANKNYDSSSAMPLRQVADLIDNHITNIDHLFKNRLPFYESN
CCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEECC
SIKSNLITKDKQYIIIMEVPGFDKSQIKVKVNGNRLFITGNIEAKNKTDYSDNYMNKNFN
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECEECCCCCCCCCCCCCCCCE
YVISLYEDVDQKNISSNLKNGILTIILPRTEIKEQEAREIPIN
EEEEEEHHCCHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCC
>Mature Secondary Structure
MLKYIPAIGAVILSSNIAIANKNYDSSSAMPLRQVADLIDNHITNIDHLFKNRLPFYESN
CCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEECC
SIKSNLITKDKQYIIIMEVPGFDKSQIKVKVNGNRLFITGNIEAKNKTDYSDNYMNKNFN
CCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCEEEEEECEECCCCCCCCCCCCCCCCE
YVISLYEDVDQKNISSNLKNGILTIILPRTEIKEQEAREIPIN
EEEEEEHHCCHHHHHHHHCCCEEEEEECCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]