| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825440
Identifier: 157825440
GI number: 157825440
Start: 321297
End: 321959
Strand: Direct
Name: 157825440
Synonym: A1C_01705
Alternate gene names: NA
Gene position: 321297-321959 (Clockwise)
Preceding gene: 157825439
Following gene: 157825441
Centisome position: 26.1
GC content: 25.34
Gene sequence:
>663_bases ATGACTGATATTTTAGATGAAGTACTGAGTGATCACAATGAAGAAAAAAGGTTGATTTTTTTCAAAAAGCTTTTACCTAT AATAATAATCATTTCTATGATAGTTATTACTATAATGGTTGTTATTAATAATAATAAAGATACAAGAATTAAAAATAACC AAAAAAACGGAGATATTCTTGTTAAGACTGTTGGTTTGGAAACAACAAAAGATAATAAAGAATTAGCTTTTAATACTTTA GAGAATTTAGTTACTATTAGTAATACTAAAATAAAAGAAATAGCTTCATTAGAACAAGTAGCTATCAAGATTTCGGAAAA AAAATATTCAGAAGCGAAAGACCTGCTTGATAAAATTATTGTAAATAAAGAATATTCTGAAATTTCTACTGCTTATGCAC GTATTGCATGGTGTGGTCTTGTTATTGATGATCAGAATCTAGATATTCAAGATAAAGAAAAATTGACAAAATATTTAAAT TATTTTGATGACAAGAAAAAACCCTTTTGGGCTACAGCAACTATCATAAAAGCTATGTGGGATATTAAGAATAATATGAA ACCACAAGCAGCAAAAAATCTAAAAAATTTATTAACTTCAGATAATGTATCTGATCTAATAAAAGATCAGGCTAAAGCAT TGCTTGTAAATTTAAGTAAATAA
Upstream 100 bases:
>100_bases TGATAAGGACTTTCCAACTAATAGAACTGCCGCATCCAAGAAAATGGCAGGAGATGCTAAGATCAAATTTGGTTGTAAAA ATAAATAAGAATAATACAAT
Downstream 100 bases:
>100_bases TAATTTGTACTTAAGGAAAAATATGACAAAAAAAATAGCACTTCTGTTATTACCTTTTATTTTAATTTCATGTAGCGGGC TTGGACCAAAACGTGTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTDILDEVLSDHNEEKRLIFFKKLLPIIIIISMIVITIMVVINNNKDTRIKNNQKNGDILVKTVGLETTKDNKELAFNTL ENLVTISNTKIKEIASLEQVAIKISEKKYSEAKDLLDKIIVNKEYSEISTAYARIAWCGLVIDDQNLDIQDKEKLTKYLN YFDDKKKPFWATATIIKAMWDIKNNMKPQAAKNLKNLLTSDNVSDLIKDQAKALLVNLSK
Sequences:
>Translated_220_residues MTDILDEVLSDHNEEKRLIFFKKLLPIIIIISMIVITIMVVINNNKDTRIKNNQKNGDILVKTVGLETTKDNKELAFNTL ENLVTISNTKIKEIASLEQVAIKISEKKYSEAKDLLDKIIVNKEYSEISTAYARIAWCGLVIDDQNLDIQDKEKLTKYLN YFDDKKKPFWATATIIKAMWDIKNNMKPQAAKNLKNLLTSDNVSDLIKDQAKALLVNLSK >Mature_219_residues TDILDEVLSDHNEEKRLIFFKKLLPIIIIISMIVITIMVVINNNKDTRIKNNQKNGDILVKTVGLETTKDNKELAFNTLE NLVTISNTKIKEIASLEQVAIKISEKKYSEAKDLLDKIIVNKEYSEISTAYARIAWCGLVIDDQNLDIQDKEKLTKYLNY FDDKKKPFWATATIIKAMWDIKNNMKPQAAKNLKNLLTSDNVSDLIKDQAKALLVNLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022588 [H]
Pfam domain/function: PF10858 DUF2659 [H]
EC number: NA
Molecular weight: Translated: 25173; Mature: 25041
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDILDEVLSDHNEEKRLIFFKKLLPIIIIISMIVITIMVVINNNKDTRIKNNQKNGDIL CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEE VKTVGLETTKDNKELAFNTLENLVTISNTKIKEIASLEQVAIKISEKKYSEAKDLLDKII EEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKEYSEISTAYARIAWCGLVIDDQNLDIQDKEKLTKYLNYFDDKKKPFWATATIIKAMW HCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DIKNNMKPQAAKNLKNLLTSDNVSDLIKDQAKALLVNLSK HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDILDEVLSDHNEEKRLIFFKKLLPIIIIISMIVITIMVVINNNKDTRIKNNQKNGDIL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCEE VKTVGLETTKDNKELAFNTLENLVTISNTKIKEIASLEQVAIKISEKKYSEAKDLLDKII EEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNKEYSEISTAYARIAWCGLVIDDQNLDIQDKEKLTKYLNYFDDKKKPFWATATIIKAMW HCCCHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DIKNNMKPQAAKNLKNLLTSDNVSDLIKDQAKALLVNLSK HHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]