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The map label for this gene is ybgF [C]

Identifier: 157825439

GI number: 157825439

Start: 320547

End: 321284

Strand: Direct

Name: ybgF [C]

Synonym: A1C_01700

Alternate gene names: 157825439

Gene position: 320547-321284 (Clockwise)

Preceding gene: 157825438

Following gene: 157825440

Centisome position: 26.04

GC content: 30.62

Gene sequence:

>738_bases
ATGAAGTTTATTGTCTTATTATTTACTTTTTTATTTTCTATGTTTTCTTTCGGAGAAAGCGAACCTATTAAAGGTAAACC
TTTAAAATATGTAGTAAATAATGATTTTGAAAATAGATTAGATGAACAGGAACAAGAAATAAGAAGGCTAATCGGTAAAG
TTGAGGTTTTACAGCATAAAATTGATCTGCTAACACAAAATTCAAATATTCCAAATCAAGAAGAAAATACTGAAATTTTA
GAAGCCGGTGATTCAAAAAAACAAGATGTTTTTGATATAGCTTTGCTTAAAGATATACCGGATAATGTTCCTAAAAAACC
TATTGCGATTAATAAGGATATAGCGCCTGATAAGCAAGCTTACGATTTGGCTCTTGCTGCTTATAAAGATAATAAACTTA
CTGAAGCAAAAGATAAGTTTAAAAATTTTATCCAAAAATATCCTAACAGTTTGCTAATTAGTAATGCTTATTTTTGGTAT
GGGGAATGCTTTTTTAAACACAAAGATTATAACGGAGCAGCGGTTAACTATTTAAAGGGTTATAAAGAGTCGCCGAAAGG
GGCAAAATCTTCCGATGGGTTATTGAAGTTAGCAATTGCCTTAGGCGAATTAAAAAAAACTCAGGAAGCATGTAATATAC
TTGATAAGCTTGATAAGGACTTTCCAACTAATAGAACTGCCGCATCCAAGAAAATGGCAGGAGATGCTAAGATCAAATTT
GGTTGTAAAAATAAATAA

Upstream 100 bases:

>100_bases
CTCATGACGATTTATTCTACATTGTAGAAATATAAAAAAATTGTGTGGAATATAAAAAAATTTTCGGTATTATAAAAAAT
TATAAATTTTTAAAAAATAT

Downstream 100 bases:

>100_bases
GAATAATACAATATGACTGATATTTTAGATGAAGTACTGAGTGATCACAATGAAGAAAAAAGGTTGATTTTTTTCAAAAA
GCTTTTACCTATAATAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: L-Pal System YbgF; TPR Repeat-Containing Protein; L System Periplasmic Component YbgF; Tetratricopeptide TPR2 Protein; TPR Domain Protein; Periplasmic Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKFIVLLFTFLFSMFSFGESEPIKGKPLKYVVNNDFENRLDEQEQEIRRLIGKVEVLQHKIDLLTQNSNIPNQEENTEIL
EAGDSKKQDVFDIALLKDIPDNVPKKPIAINKDIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWY
GECFFKHKDYNGAAVNYLKGYKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNRTAASKKMAGDAKIKF
GCKNK

Sequences:

>Translated_245_residues
MKFIVLLFTFLFSMFSFGESEPIKGKPLKYVVNNDFENRLDEQEQEIRRLIGKVEVLQHKIDLLTQNSNIPNQEENTEIL
EAGDSKKQDVFDIALLKDIPDNVPKKPIAINKDIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWY
GECFFKHKDYNGAAVNYLKGYKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNRTAASKKMAGDAKIKF
GCKNK
>Mature_245_residues
MKFIVLLFTFLFSMFSFGESEPIKGKPLKYVVNNDFENRLDEQEQEIRRLIGKVEVLQHKIDLLTQNSNIPNQEENTEIL
EAGDSKKQDVFDIALLKDIPDNVPKKPIAINKDIAPDKQAYDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWY
GECFFKHKDYNGAAVNYLKGYKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNRTAASKKMAGDAKIKF
GCKNK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27845; Mature: 27845

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIVLLFTFLFSMFSFGESEPIKGKPLKYVVNNDFENRLDEQEQEIRRLIGKVEVLQHK
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDLLTQNSNIPNQEENTEILEAGDSKKQDVFDIALLKDIPDNVPKKPIAINKDIAPDKQA
HHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHH
YDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKHKDYNGAAVNYLKG
HHHHHEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHC
YKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNRTAASKKMAGDAKIKF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEC
GCKNK
CCCCC
>Mature Secondary Structure
MKFIVLLFTFLFSMFSFGESEPIKGKPLKYVVNNDFENRLDEQEQEIRRLIGKVEVLQHK
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
IDLLTQNSNIPNQEENTEILEAGDSKKQDVFDIALLKDIPDNVPKKPIAINKDIAPDKQA
HHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHH
YDLALAAYKDNKLTEAKDKFKNFIQKYPNSLLISNAYFWYGECFFKHKDYNGAAVNYLKG
HHHHHEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHC
YKESPKGAKSSDGLLKLAIALGELKKTQEACNILDKLDKDFPTNRTAASKKMAGDAKIKF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEC
GCKNK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA