| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825389
Identifier: 157825389
GI number: 157825389
Start: 267090
End: 267401
Strand: Direct
Name: 157825389
Synonym: A1C_01415
Alternate gene names: NA
Gene position: 267090-267401 (Clockwise)
Preceding gene: 157825383
Following gene: 157825390
Centisome position: 21.7
GC content: 29.49
Gene sequence:
>312_bases ATGACAAAAAATATAAATTCTAAACTTACCAAATTATTCTTACTTAGCTGTGCTAATGCGGCTATTATGACAGCTATGCC TATAAATGAAGATATAACTATTGCTGATATTTTAACTAAAAATGCATCATATACAGCTTTAACTGGACAAGCTCAGTGTG AAGGTATAAAAAATTTGGTAGCGAATGTAAATTTTAAAACAGTTTTAGAACCAGATCGTAGAGTATTACAAGAAATTGTT ATAAGAGATTTTGATACTCACAATACCAACTTAGGAGATATATTGCTCTTAGAGCAGAAAAAGATGCCTTAA
Upstream 100 bases:
>100_bases TATTTTTTTTCGTGTTAAATTATTTTTAACAATTACTTATTACTTAAATATTAATATCCTTAAGTAATTATTAATATTTA TTCAATGAGAATTAGATATT
Downstream 100 bases:
>100_bases TAAAAGGTATTGATGATGCTCCAAGAGAAAGTAGTTAGAAATAACAGAATCGGATGTCCAATGGTGGGGAATGCCAGCTC ATGAACCTGCAGCAAGGAAT
Product: cell surface antigen-like protein Sca8
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTKNINSKLTKLFLLSCANAAIMTAMPINEDITIADILTKNASYTALTGQAQCEGIKNLVANVNFKTVLEPDRRVLQEIV IRDFDTHNTNLGDILLLEQKKMP
Sequences:
>Translated_103_residues MTKNINSKLTKLFLLSCANAAIMTAMPINEDITIADILTKNASYTALTGQAQCEGIKNLVANVNFKTVLEPDRRVLQEIV IRDFDTHNTNLGDILLLEQKKMP >Mature_102_residues TKNINSKLTKLFLLSCANAAIMTAMPINEDITIADILTKNASYTALTGQAQCEGIKNLVANVNFKTVLEPDRRVLQEIVI RDFDTHNTNLGDILLLEQKKMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11448; Mature: 11316
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNINSKLTKLFLLSCANAAIMTAMPINEDITIADILTKNASYTALTGQAQCEGIKNLV CCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCEEEECCCHHHHHHHHHH ANVNFKTVLEPDRRVLQEIVIRDFDTHNTNLGDILLLEQKKMP HCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure TKNINSKLTKLFLLSCANAAIMTAMPINEDITIADILTKNASYTALTGQAQCEGIKNLV CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHCCCCEEEECCCHHHHHHHHHH ANVNFKTVLEPDRRVLQEIVIRDFDTHNTNLGDILLLEQKKMP HCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA