| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825376
Identifier: 157825376
GI number: 157825376
Start: 256028
End: 256501
Strand: Direct
Name: 157825376
Synonym: A1C_01350
Alternate gene names: NA
Gene position: 256028-256501 (Clockwise)
Preceding gene: 157825374
Following gene: 157825377
Centisome position: 20.8
GC content: 29.32
Gene sequence:
>474_bases ATGCGTTCTTTATTTGTAGTAATTATATTCTTTCTAATGAGTAGTTGTAATTTAAAACCGGTATATAGTGAAAAATACAG TAGAAATAATGATTTAGAAGCTATTAAAGTTGAACCGATTAGAACAATTGAAGGAGCTGAGTTTTATCATCGTTTAACTA GTATTTTACCTCAGAAAGCAAAAGCAAAATACTTGCTTAAAGCAGAGCTTATCGCAACAACTATGCCTGCTACGATTGAA AAAAACACCAATGTTTTAATGGAATATATTAATAAATTAGTTAGGTATAAATTAATTGATATAGAAAGCCAAAAGGTTTT AATTGCAGAGAAGTTTTACCAAAACACGTCATATAATGCTCTTTTTACACCATATGCCACAAATGTTGAAGGAGATGAAA CAGGAATAGACTTAGCATATCAAGCAGCAGAAGAAATTCGTAGCAGATTAATTTTATATTTTACACGAAAATAG
Upstream 100 bases:
>100_bases TTATTACTATAAGTATTAACAAATACTAATTATTATAATTTTCTTTCACAAAAGCGAAATTAACTGTTATTAATATAAAA AATCAATTTTAATCTAGTAT
Downstream 100 bases:
>100_bases TTAAGCTATGAAATTTTATTTTTCACAAATAGGTAGATTATTTGCACTAATAAAAGCCGGAAAGATTAGAGCGCTTTTAC TATATGGTCCTGATAAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRSLFVVIIFFLMSSCNLKPVYSEKYSRNNDLEAIKVEPIRTIEGAEFYHRLTSILPQKAKAKYLLKAELIATTMPATIE KNTNVLMEYINKLVRYKLIDIESQKVLIAEKFYQNTSYNALFTPYATNVEGDETGIDLAYQAAEEIRSRLILYFTRK
Sequences:
>Translated_157_residues MRSLFVVIIFFLMSSCNLKPVYSEKYSRNNDLEAIKVEPIRTIEGAEFYHRLTSILPQKAKAKYLLKAELIATTMPATIE KNTNVLMEYINKLVRYKLIDIESQKVLIAEKFYQNTSYNALFTPYATNVEGDETGIDLAYQAAEEIRSRLILYFTRK >Mature_157_residues MRSLFVVIIFFLMSSCNLKPVYSEKYSRNNDLEAIKVEPIRTIEGAEFYHRLTSILPQKAKAKYLLKAELIATTMPATIE KNTNVLMEYINKLVRYKLIDIESQKVLIAEKFYQNTSYNALFTPYATNVEGDETGIDLAYQAAEEIRSRLILYFTRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019227 [H]
Pfam domain/function: PF09927 DUF2159 [H]
EC number: NA
Molecular weight: Translated: 18222; Mature: 18222
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLFVVIIFFLMSSCNLKPVYSEKYSRNNDLEAIKVEPIRTIEGAEFYHRLTSILPQKA CHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHH KAKYLLKAELIATTMPATIEKNTNVLMEYINKLVRYKLIDIESQKVLIAEKFYQNTSYNA HHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCE LFTPYATNVEGDETGIDLAYQAAEEIRSRLILYFTRK EECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECC >Mature Secondary Structure MRSLFVVIIFFLMSSCNLKPVYSEKYSRNNDLEAIKVEPIRTIEGAEFYHRLTSILPQKA CHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCHH KAKYLLKAELIATTMPATIEKNTNVLMEYINKLVRYKLIDIESQKVLIAEKFYQNTSYNA HHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCCE LFTPYATNVEGDETGIDLAYQAAEEIRSRLILYFTRK EECCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]