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The map label for this gene is holA

Identifier: 157825377

GI number: 157825377

Start: 256509

End: 257489

Strand: Direct

Name: holA

Synonym: A1C_01355

Alternate gene names: NA

Gene position: 256509-257489 (Clockwise)

Preceding gene: 157825376

Following gene: 157825378

Centisome position: 20.84

GC content: 27.73

Gene sequence:

>981_bases
ATGAAATTTTATTTTTCACAAATAGGTAGATTATTTGCACTAATAAAAGCCGGAAAGATTAGAGCGCTTTTACTATATGG
TCCTGATAAAGGGTATATAGAAAAAATTTGTAAGCACTTAGTAAAAAGCTTAAATATGCTACAAACTTGTATAGAATACG
CAGATCTTAATATTTCATCTGTAGAAATATTACTTAATTCGCCTAATTTTTTTGGTCAAAAAGAATTAATTAAAATTAGA
TCAATTGGGAATTCACTCGATAATAATTTAAAAACAATTCTAAGCAGTGATTATATAAATTTTCCTGTATTTATAGGGGA
AGAAATTACTGCAAGTGGAAGCATTAGAAAGTTTTTTGAAACAGAAGAATATTTAGCAGCAGTTGCTTGTTATCATGACG
ATGAAGCAAAAATTGAACGGATTATTTTAGATAAAGTAGAAAAAACTAATAAAGTTATAAGTAAAGAAGCTATCACTTAT
TTAAAAGCTCATTTAAAAGGTGATCATGATTTAATTTGTAGCGAAATAAATAAATTGATATATTTTGTTCATGACGCACG
CGAAATTACTTTAAACGATGTTCTAAAAGTTATAAGTAGCGAAATTACGGCAAACGGCAGTGATTTAGCAATGTATTTTT
CAAAAAAAGATTATAGTAATTTTCTGCAAGAGCTGGAAATATTAAAAAAACAAAATATCAATGAAGTGTTAATTATTAGA
GCCTTAATAAGGCATTATTTAAATTTATATATAGTTTTGTTGAAAGTAAAAAACGGTGTGCGTTTGGAACTCGCAATAAA
ATCATTATCTCCACCGATTTTTTATCAATATATTAATGATTTTACAAAGATAGCAACCAGTCTTAGTCTAACTGAATGTT
TAGAGACTTTAAAACTGTTACAACAAGCGGAGGTGGATTATAAATTAAATCCTGCTGGTTTTGATTTACTTCAGAAAGTT
ATTGATGTCATTCCCGCGTAG

Upstream 100 bases:

>100_bases
AATGTTGAAGGAGATGAAACAGGAATAGACTTAGCATATCAAGCAGCAGAAGAAATTCGTAGCAGATTAATTTTATATTT
TACACGAAAATAGTTAAGCT

Downstream 100 bases:

>100_bases
GCGGGACTCCGGAAAACACAACTTTAATATTGATTATAAAATTATATTTTTGATAAAATAAACATATAAAAACTAAATTT
TTTATATGTTCTAATGGATT

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MKFYFSQIGRLFALIKAGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTCIEYADLNISSVEILLNSPNFFGQKELIKIR
SIGNSLDNNLKTILSSDYINFPVFIGEEITASGSIRKFFETEEYLAAVACYHDDEAKIERIILDKVEKTNKVISKEAITY
LKAHLKGDHDLICSEINKLIYFVHDAREITLNDVLKVISSEITANGSDLAMYFSKKDYSNFLQELEILKKQNINEVLIIR
ALIRHYLNLYIVLLKVKNGVRLELAIKSLSPPIFYQYINDFTKIATSLSLTECLETLKLLQQAEVDYKLNPAGFDLLQKV
IDVIPA

Sequences:

>Translated_326_residues
MKFYFSQIGRLFALIKAGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTCIEYADLNISSVEILLNSPNFFGQKELIKIR
SIGNSLDNNLKTILSSDYINFPVFIGEEITASGSIRKFFETEEYLAAVACYHDDEAKIERIILDKVEKTNKVISKEAITY
LKAHLKGDHDLICSEINKLIYFVHDAREITLNDVLKVISSEITANGSDLAMYFSKKDYSNFLQELEILKKQNINEVLIIR
ALIRHYLNLYIVLLKVKNGVRLELAIKSLSPPIFYQYINDFTKIATSLSLTECLETLKLLQQAEVDYKLNPAGFDLLQKV
IDVIPA
>Mature_326_residues
MKFYFSQIGRLFALIKAGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTCIEYADLNISSVEILLNSPNFFGQKELIKIR
SIGNSLDNNLKTILSSDYINFPVFIGEEITASGSIRKFFETEEYLAAVACYHDDEAKIERIILDKVEKTNKVISKEAITY
LKAHLKGDHDLICSEINKLIYFVHDAREITLNDVLKVISSEITANGSDLAMYFSKKDYSNFLQELEILKKQNINEVLIIR
ALIRHYLNLYIVLLKVKNGVRLELAIKSLSPPIFYQYINDFTKIATSLSLTECLETLKLLQQAEVDYKLNPAGFDLLQKV
IDVIPA

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921 [H]

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 37202; Mature: 37202

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFYFSQIGRLFALIKAGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTCIEYADLNISS
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VEILLNSPNFFGQKELIKIRSIGNSLDNNLKTILSSDYINFPVFIGEEITASGSIRKFFE
EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHH
TEEYLAAVACYHDDEAKIERIILDKVEKTNKVISKEAITYLKAHLKGDHDLICSEINKLI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHE
YFVHDAREITLNDVLKVISSEITANGSDLAMYFSKKDYSNFLQELEILKKQNINEVLIIR
EHHHCCCEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHH
ALIRHYLNLYIVLLKVKNGVRLELAIKSLSPPIFYQYINDFTKIATSLSLTECLETLKLL
HHHHHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAEVDYKLNPAGFDLLQKVIDVIPA
HHHCCCEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFYFSQIGRLFALIKAGKIRALLLYGPDKGYIEKICKHLVKSLNMLQTCIEYADLNISS
CCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
VEILLNSPNFFGQKELIKIRSIGNSLDNNLKTILSSDYINFPVFIGEEITASGSIRKFFE
EEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHH
TEEYLAAVACYHDDEAKIERIILDKVEKTNKVISKEAITYLKAHLKGDHDLICSEINKLI
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHE
YFVHDAREITLNDVLKVISSEITANGSDLAMYFSKKDYSNFLQELEILKKQNINEVLIIR
EHHHCCCEECHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHH
ALIRHYLNLYIVLLKVKNGVRLELAIKSLSPPIFYQYINDFTKIATSLSLTECLETLKLL
HHHHHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAEVDYKLNPAGFDLLQKVIDVIPA
HHHCCCEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]