| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825261
Identifier: 157825261
GI number: 157825261
Start: 126589
End: 127080
Strand: Reverse
Name: 157825261
Synonym: A1C_00700
Alternate gene names: NA
Gene position: 127080-126589 (Counterclockwise)
Preceding gene: 157825262
Following gene: 157825260
Centisome position: 10.32
GC content: 27.03
Gene sequence:
>492_bases ATGAGCAATAATAATCGTGAAAACATATACAAAGCATTTCATTGTATTTCAGAAGCAGCCAATTCTGCCTATTCAGCCAT AAATCATTTTTTAGCACTACCTAATGTATTTAATAAATATCCTACTTTTATTTCTTACATTTTTTCTAAAACAGCAAAAT TAGACTCTAATATAACCAGTATAATTCAAAATGGTGTTATTATATATGAGATATCAACAACCTTAATAAGTGCTGTAAAT ACTTTTTATAAAGATAAAAAACTAGTTGATGAAATATTAAAAGACGGACAAAATGCTATTAATAAGCTTATTGAAACAAC AACCTATGTATCGCCAATAGTGGCAGATATTACAACTTCTTACTTAGTGGATCCGTATAAAGAAGAAAAAGCACTATTAT TTGACTTACAAATTCCTAACTCTACTAGTGATGATTGTTATAAATTATCAGGTACTGAAAGTGTAACATTAACTGAAATT GAATGTTATTGA
Upstream 100 bases:
>100_bases TTAGTAAATAAATTTTAATATTGACACTTCTTAATTTAGTAGTATGATAGATTATTATCATGTTTCATGGTAATAATCTA CATAAAAAAGAGGTAAGTTT
Downstream 100 bases:
>100_bases CTCTAAATTGACACGAATTATGGATAAAGATTTATCCATAATTCGGTAAGTAATATTTCTTGTTTATATCAAGTTATCGT ACATGCTTATAGTGCTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSNNNRENIYKAFHCISEAANSAYSAINHFLALPNVFNKYPTFISYIFSKTAKLDSNITSIIQNGVIIYEISTTLISAVN TFYKDKKLVDEILKDGQNAINKLIETTTYVSPIVADITTSYLVDPYKEEKALLFDLQIPNSTSDDCYKLSGTESVTLTEI ECY
Sequences:
>Translated_163_residues MSNNNRENIYKAFHCISEAANSAYSAINHFLALPNVFNKYPTFISYIFSKTAKLDSNITSIIQNGVIIYEISTTLISAVN TFYKDKKLVDEILKDGQNAINKLIETTTYVSPIVADITTSYLVDPYKEEKALLFDLQIPNSTSDDCYKLSGTESVTLTEI ECY >Mature_162_residues SNNNRENIYKAFHCISEAANSAYSAINHFLALPNVFNKYPTFISYIFSKTAKLDSNITSIIQNGVIIYEISTTLISAVNT FYKDKKLVDEILKDGQNAINKLIETTTYVSPIVADITTSYLVDPYKEEKALLFDLQIPNSTSDDCYKLSGTESVTLTEIE CY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18324; Mature: 18193
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNNRENIYKAFHCISEAANSAYSAINHFLALPNVFNKYPTFISYIFSKTAKLDSNITS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIQNGVIIYEISTTLISAVNTFYKDKKLVDEILKDGQNAINKLIETTTYVSPIVADITTS HHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YLVDPYKEEKALLFDLQIPNSTSDDCYKLSGTESVTLTEIECY HHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEEEEEEEC >Mature Secondary Structure SNNNRENIYKAFHCISEAANSAYSAINHFLALPNVFNKYPTFISYIFSKTAKLDSNITS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIQNGVIIYEISTTLISAVNTFYKDKKLVDEILKDGQNAINKLIETTTYVSPIVADITTS HHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH YLVDPYKEEKALLFDLQIPNSTSDDCYKLSGTESVTLTEIECY HHCCCCCCCCEEEEEEECCCCCCCCCEEECCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]