| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825155
Identifier: 157825155
GI number: 157825155
Start: 22115
End: 22783
Strand: Reverse
Name: 157825155
Synonym: A1C_00160
Alternate gene names: NA
Gene position: 22783-22115 (Counterclockwise)
Preceding gene: 157825157
Following gene: 157825154
Centisome position: 1.85
GC content: 25.71
Gene sequence:
>669_bases ATGATCACATTTTTTGATATTACTATTTTTTCTATTATTACTCTTTTCTCATTTTTCGGATTATATCAAGGTATAATTGG GTTTTCAACTAGAATACTCGGTTTTATTACTTATATAATGTTAGGATATTTCTTATATCCATATATTTCTGAACTAATCG GGAAATATATGGAGAATGAGGTTATAAGAATAATTATTGCCTGTATTATATCTTATCTTGTTTCTTTAATTTTATGTGTT TTTATAGTTTATAAATTTCTTGCTATAATTTCGTTTATGAGAAACGGTTTTATTGACAGATTCTTAGGGTCATTAGCAGG ATTTGCTGTAGGTACTACTATCTCGTTAGTATTATTTTTTATCACAATGGTCTTTACTTCTGAAAACTATTTTAAAAGTA AATCTTTAAAAGATTTTGTAGTAAGTAGCAAGCAGAGCAAATATGGAGGAGTACTGAAAGTGTCCGTTACCACTGATTAT TTAGATGAATTAAGTAAAAATATTATAGTTATAATTCCAAACGAGACTTTAAAATCTATCAAAATATTTGAAAATAAAGA CTTAAATAATTTCAAAAACTCCATTAAGAAATCAAATGATTCTAACGGTGATGAGGATATATTTTCGCAAGAGTTACAAG ATGAGTTTTCTAATATAGATGATGAATAA
Upstream 100 bases:
>100_bases TGCGCCAAGAAAGAATTTAACTAGCTTTAAAATATCTTTATAGATCACATCTTAAAGTATATAAGATTTAAATCCTATTA TTCAATAGAAGTTAACAATA
Downstream 100 bases:
>100_bases GATGTTACTTCATAGCTATTATGTCTTCATGCGTATGCGGGTGGCATCCAGTAACCTTTAATATTATCACGTGGCTTGCA CTGGATACGGTTAAAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MITFFDITIFSIITLFSFFGLYQGIIGFSTRILGFITYIMLGYFLYPYISELIGKYMENEVIRIIIACIISYLVSLILCV FIVYKFLAIISFMRNGFIDRFLGSLAGFAVGTTISLVLFFITMVFTSENYFKSKSLKDFVVSSKQSKYGGVLKVSVTTDY LDELSKNIIVIIPNETLKSIKIFENKDLNNFKNSIKKSNDSNGDEDIFSQELQDEFSNIDDE
Sequences:
>Translated_222_residues MITFFDITIFSIITLFSFFGLYQGIIGFSTRILGFITYIMLGYFLYPYISELIGKYMENEVIRIIIACIISYLVSLILCV FIVYKFLAIISFMRNGFIDRFLGSLAGFAVGTTISLVLFFITMVFTSENYFKSKSLKDFVVSSKQSKYGGVLKVSVTTDY LDELSKNIIVIIPNETLKSIKIFENKDLNNFKNSIKKSNDSNGDEDIFSQELQDEFSNIDDE >Mature_222_residues MITFFDITIFSIITLFSFFGLYQGIIGFSTRILGFITYIMLGYFLYPYISELIGKYMENEVIRIIIACIISYLVSLILCV FIVYKFLAIISFMRNGFIDRFLGSLAGFAVGTTISLVLFFITMVFTSENYFKSKSLKDFVVSSKQSKYGGVLKVSVTTDY LDELSKNIIVIIPNETLKSIKIFENKDLNNFKNSIKKSNDSNGDEDIFSQELQDEFSNIDDE
Specific function: Unknown
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25387; Mature: 25387
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITFFDITIFSIITLFSFFGLYQGIIGFSTRILGFITYIMLGYFLYPYISELIGKYMENE CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRIIIACIISYLVSLILCVFIVYKFLAIISFMRNGFIDRFLGSLAGFAVGTTISLVLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITMVFTSENYFKSKSLKDFVVSSKQSKYGGVLKVSVTTDYLDELSKNIIVIIPNETLKSI HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCEEEEECCHHHHHH KIFENKDLNNFKNSIKKSNDSNGDEDIFSQELQDEFSNIDDE HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MITFFDITIFSIITLFSFFGLYQGIIGFSTRILGFITYIMLGYFLYPYISELIGKYMENE CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIRIIIACIISYLVSLILCVFIVYKFLAIISFMRNGFIDRFLGSLAGFAVGTTISLVLFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITMVFTSENYFKSKSLKDFVVSSKQSKYGGVLKVSVTTDYLDELSKNIIVIIPNETLKSI HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHCCEEEEECCHHHHHH KIFENKDLNNFKNSIKKSNDSNGDEDIFSQELQDEFSNIDDE HHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA