| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157373106
Identifier: 157373106
GI number: 157373106
Start: 5401368
End: 5403311
Strand: Direct
Name: 157373106
Synonym: Spro_4875
Alternate gene names: NA
Gene position: 5401368-5403311 (Clockwise)
Preceding gene: 157373105
Following gene: 157373112
Centisome position: 99.13
GC content: 48.66
Gene sequence:
>1944_bases ATGAGAAAGTCATTACTTCTTACCCTACTTGCTATCTATTCAGTTAATGGCATGGCCAAGGTGGACTTTTATGCCGGCGA AAACATCGATTACTCGTCAGTCGTGATTAAATTAAGTGACCAGGGTCTGAAGGATATAGGCGAAGGCATACAAAGCAGGA ATGGCGGGCAAAGCCTGTCGCTGTACGGCAGTGACGGGATTGAGATGAGGTTTGAAAAGCTGTTTAAGGAGACCCAACGC AGCTCACTGATTGGCCGTGCCGGCAATGCTAATGGCTTAAACAAGTATTTTGTGGTGAAAATTCCTGACGAAAAATCCAA CGATGTCGAATACATAAACAATATCGTCAGAATGTTTGAAAATGATAAAGATATCGATGTTATTTATCCTGCAGCCAAAC CAGCATCCATGGATGAATACGTCAGCGCATCTGGAGAGCTTCGCCATTTCTCATTAGACGATAATAAACCTTCATTACCC GAGCGCAACACCCGTCACGTTCCCTCCTTTGTCGATATGCAAGATTATCTTAAAGCGCCTGATGAACCACGAGCCGGTTA TGCTCTGGGGGGCGTCAATGCGTTAAATGCACACAAGCATTATCCTGGCGCTAAAGGTGAAGGGGTAACGGTGATGTCCA ACGAAAACGGACGTTGGAATAACGATCATATAGACCTGCCAAGAGCCATTTTCTCAATCGGCGAAGATATTGCAGCCTCT CGTTATCACGATACGATGTCTCTGGGTATTATGGCCGGAAAAGACAACGACTTTGGCGTATTGGGCATTGCCCATCAGTC TCAATTTGCCTATGTAGCCTGGCAAGTCTCTAATTTTGTAGATGGAATAAACTTACTAAAAGCAGGGGATGTAATCCAGG TTGGTCAGCAAAGATTAACATCTCTTATTCCAGCTTCTACATGCCGGTCTGGTAATTGTTTTGTGCCGGTAGAAATTGAG CAGGCCTGGTTTGATGCGATTAAGACCGCTACTGACAGCGGCATTCACGTCATTATGGCCGCAGGTAATGGTAACGTAAA TCTTGATCACCCGGTTTTCCAGGGGAGATTTGATCGTAGCGTCAGGGATTCTGGCGCCATTATTGCCGGAGCCGTTTGTG GGGACGATGGCAAAAAGGCCATATTCAGCACTTATGGTTCCAGAATCGATAGCGCAAGCTGGGGTTGCTGGGACATTGTC ACTACCACAGTAGACTATAAAGCCAACCTATGGGCTGAACCTAATGCGCAATATACCCAAGCATACTCAGGCACTTCAGC GGCTAATCCCATTATCGCCGGGGCTGCCGCCAGCCTGTCGGGGATAGCGAAACAATACGGCAGGTTACTCACACCAAGGC ACCTGCGTAAGCTACTGACCGAAACCGGCACCCCATTGGTGGATACCCATCAGCCGGTTGGCACCCAGCCTGATTTAATG AAGGCGGCGGAAAAAATGCTGGACGAAACCCCGGTAAATGAAGACCTGACCATTTCTAATTTGCGGACGGAAATCATCCA ACAAGGGCGTTCAATCCTGAGTTTTAGCGTTCGGGCGGAAGGAAGCATGACGCTGGAGGCTGAAGTCACGGATCGACAAG GTAATAAAAAAGGCGTTGTTAAACAGAAAATTGAAAACGACAGCGTCACCGTACAAATCCCATTGAGCGGCGTTACCGCG GGTAAGTATTCATTAAGATATAAAGCCGGTAATGAGAAAGGGGAGACGATTAAACAGGAAACGCTGAGCTTTACGCTGGC TGATGCCTCATCGGCAGCGCCCTGGGACAGTAACAAGGCCTATGACAAGCTCTGCAGTAGCGTGGCCTATGACGGCAAAG AGTGGCAGAACGGTTGGTGGACCCGAGGCGATGTGCCCGGTGCTGCCGGTGAATGGGGCGTATGGCGCGTAAAAGGCGCG GCTAACATGCACCCTGGCTGCTAA
Upstream 100 bases:
>100_bases TTTAAATTTCTAGCCGTCAGGGGACAATCTATTTAATTTTCATTATTTATAAATATACCCCTGCCTGAGTTCTTATATAA AGAAAAAATTAGAGGCTATT
Downstream 100 bases:
>100_bases CCGCTAACCCATTGAGAGTTACCTGTTTGTAGAAACCACCGGCCTCGTACAAACCAGGTAACTCTTTTACTAATGCCGTC AGGCAATCGCCTCGCAACCC
Product: carbohydrate-binding family V/XII protein
Products: NA
Alternate protein names: Serine Protease; Serine Protease Subtilase Family; S8 Family Peptidase; Peptidase S8/S53 Family; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Fibronectin Type III Domain-Containing Protein; Microbial Collagenase; Subtilisin Family Serine Protease-Like Protein
Number of amino acids: Translated: 647; Mature: 647
Protein sequence:
>647_residues MRKSLLLTLLAIYSVNGMAKVDFYAGENIDYSSVVIKLSDQGLKDIGEGIQSRNGGQSLSLYGSDGIEMRFEKLFKETQR SSLIGRAGNANGLNKYFVVKIPDEKSNDVEYINNIVRMFENDKDIDVIYPAAKPASMDEYVSASGELRHFSLDDNKPSLP ERNTRHVPSFVDMQDYLKAPDEPRAGYALGGVNALNAHKHYPGAKGEGVTVMSNENGRWNNDHIDLPRAIFSIGEDIAAS RYHDTMSLGIMAGKDNDFGVLGIAHQSQFAYVAWQVSNFVDGINLLKAGDVIQVGQQRLTSLIPASTCRSGNCFVPVEIE QAWFDAIKTATDSGIHVIMAAGNGNVNLDHPVFQGRFDRSVRDSGAIIAGAVCGDDGKKAIFSTYGSRIDSASWGCWDIV TTTVDYKANLWAEPNAQYTQAYSGTSAANPIIAGAAASLSGIAKQYGRLLTPRHLRKLLTETGTPLVDTHQPVGTQPDLM KAAEKMLDETPVNEDLTISNLRTEIIQQGRSILSFSVRAEGSMTLEAEVTDRQGNKKGVVKQKIENDSVTVQIPLSGVTA GKYSLRYKAGNEKGETIKQETLSFTLADASSAAPWDSNKAYDKLCSSVAYDGKEWQNGWWTRGDVPGAAGEWGVWRVKGA ANMHPGC
Sequences:
>Translated_647_residues MRKSLLLTLLAIYSVNGMAKVDFYAGENIDYSSVVIKLSDQGLKDIGEGIQSRNGGQSLSLYGSDGIEMRFEKLFKETQR SSLIGRAGNANGLNKYFVVKIPDEKSNDVEYINNIVRMFENDKDIDVIYPAAKPASMDEYVSASGELRHFSLDDNKPSLP ERNTRHVPSFVDMQDYLKAPDEPRAGYALGGVNALNAHKHYPGAKGEGVTVMSNENGRWNNDHIDLPRAIFSIGEDIAAS RYHDTMSLGIMAGKDNDFGVLGIAHQSQFAYVAWQVSNFVDGINLLKAGDVIQVGQQRLTSLIPASTCRSGNCFVPVEIE QAWFDAIKTATDSGIHVIMAAGNGNVNLDHPVFQGRFDRSVRDSGAIIAGAVCGDDGKKAIFSTYGSRIDSASWGCWDIV TTTVDYKANLWAEPNAQYTQAYSGTSAANPIIAGAAASLSGIAKQYGRLLTPRHLRKLLTETGTPLVDTHQPVGTQPDLM KAAEKMLDETPVNEDLTISNLRTEIIQQGRSILSFSVRAEGSMTLEAEVTDRQGNKKGVVKQKIENDSVTVQIPLSGVTA GKYSLRYKAGNEKGETIKQETLSFTLADASSAAPWDSNKAYDKLCSSVAYDGKEWQNGWWTRGDVPGAAGEWGVWRVKGA ANMHPGC >Mature_647_residues MRKSLLLTLLAIYSVNGMAKVDFYAGENIDYSSVVIKLSDQGLKDIGEGIQSRNGGQSLSLYGSDGIEMRFEKLFKETQR SSLIGRAGNANGLNKYFVVKIPDEKSNDVEYINNIVRMFENDKDIDVIYPAAKPASMDEYVSASGELRHFSLDDNKPSLP ERNTRHVPSFVDMQDYLKAPDEPRAGYALGGVNALNAHKHYPGAKGEGVTVMSNENGRWNNDHIDLPRAIFSIGEDIAAS RYHDTMSLGIMAGKDNDFGVLGIAHQSQFAYVAWQVSNFVDGINLLKAGDVIQVGQQRLTSLIPASTCRSGNCFVPVEIE QAWFDAIKTATDSGIHVIMAAGNGNVNLDHPVFQGRFDRSVRDSGAIIAGAVCGDDGKKAIFSTYGSRIDSASWGCWDIV TTTVDYKANLWAEPNAQYTQAYSGTSAANPIIAGAAASLSGIAKQYGRLLTPRHLRKLLTETGTPLVDTHQPVGTQPDLM KAAEKMLDETPVNEDLTISNLRTEIIQQGRSILSFSVRAEGSMTLEAEVTDRQGNKKGVVKQKIENDSVTVQIPLSGVTA GKYSLRYKAGNEKGETIKQETLSFTLADASSAAPWDSNKAYDKLCSSVAYDGKEWQNGWWTRGDVPGAAGEWGVWRVKGA ANMHPGC
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70378; Mature: 70378
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSLLLTLLAIYSVNGMAKVDFYAGENIDYSSVVIKLSDQGLKDIGEGIQSRNGGQSLS CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE LYGSDGIEMRFEKLFKETQRSSLIGRAGNANGLNKYFVVKIPDEKSNDVEYINNIVRMFE EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHC NDKDIDVIYPAAKPASMDEYVSASGELRHFSLDDNKPSLPERNTRHVPSFVDMQDYLKAP CCCCCEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC DEPRAGYALGGVNALNAHKHYPGAKGEGVTVMSNENGRWNNDHIDLPRAIFSIGEDIAAS CCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHH RYHDTMSLGIMAGKDNDFGVLGIAHQSQFAYVAWQVSNFVDGINLLKAGDVIQVGQQRLT HCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHH SLIPASTCRSGNCFVPVEIEQAWFDAIKTATDSGIHVIMAAGNGNVNLDHPVFQGRFDRS HHCCHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHCCCCCCC VRDSGAIIAGAVCGDDGKKAIFSTYGSRIDSASWGCWDIVTTTVDYKANLWAEPNAQYTQ CCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEECCCCCCHHE AYSGTSAANPIIAGAAASLSGIAKQYGRLLTPRHLRKLLTETGTPLVDTHQPVGTQPDLM ECCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHH KAAEKMLDETPVNEDLTISNLRTEIIQQGRSILSFSVRAEGSMTLEAEVTDRQGNKKGVV HHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHH KQKIENDSVTVQIPLSGVTAGKYSLRYKAGNEKGETIKQETLSFTLADASSAAPWDSNKA HHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEEEECCCCCCCCCCCHH YDKLCSSVAYDGKEWQNGWWTRGDVPGAAGEWGVWRVKGAANMHPGC HHHHHHHHHCCCCHHCCCCEECCCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MRKSLLLTLLAIYSVNGMAKVDFYAGENIDYSSVVIKLSDQGLKDIGEGIQSRNGGQSLS CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEE LYGSDGIEMRFEKLFKETQRSSLIGRAGNANGLNKYFVVKIPDEKSNDVEYINNIVRMFE EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHC NDKDIDVIYPAAKPASMDEYVSASGELRHFSLDDNKPSLPERNTRHVPSFVDMQDYLKAP CCCCCEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCC DEPRAGYALGGVNALNAHKHYPGAKGEGVTVMSNENGRWNNDHIDLPRAIFSIGEDIAAS CCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHH RYHDTMSLGIMAGKDNDFGVLGIAHQSQFAYVAWQVSNFVDGINLLKAGDVIQVGQQRLT HCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHH SLIPASTCRSGNCFVPVEIEQAWFDAIKTATDSGIHVIMAAGNGNVNLDHPVFQGRFDRS HHCCHHCCCCCCCEEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHCCCCCCC VRDSGAIIAGAVCGDDGKKAIFSTYGSRIDSASWGCWDIVTTTVDYKANLWAEPNAQYTQ CCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEECCEEEECCCCCCHHE AYSGTSAANPIIAGAAASLSGIAKQYGRLLTPRHLRKLLTETGTPLVDTHQPVGTQPDLM ECCCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCHHHH KAAEKMLDETPVNEDLTISNLRTEIIQQGRSILSFSVRAEGSMTLEAEVTDRQGNKKGVV HHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCCHH KQKIENDSVTVQIPLSGVTAGKYSLRYKAGNEKGETIKQETLSFTLADASSAAPWDSNKA HHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHEEEEECCCCCCCCCCCHH YDKLCSSVAYDGKEWQNGWWTRGDVPGAAGEWGVWRVKGAANMHPGC HHHHHHHHHCCCCHHCCCCEECCCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA