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The map label for this gene is yicH [H]

Identifier: 157373105

GI number: 157373105

Start: 5399356

End: 5401017

Strand: Direct

Name: yicH [H]

Synonym: Spro_4874

Alternate gene names: 157373105

Gene position: 5399356-5401017 (Clockwise)

Preceding gene: 157373104

Following gene: 157373106

Centisome position: 99.09

GC content: 56.68

Gene sequence:

>1662_bases
ATGAAATTTATCGGGAAACTGTTGCTGACGTTGCTGCTGCTGGTAGTGCTTGCCATTGCGCTGTTGTACGTCATTGGGCA
AACCCGTTGGGCCGCGGGCTACTTGAGCCGCTGGGTCAGCGATAACAGTGAATATCGCCTGTCGGTAGCGAAGATCTCGC
ACTCGTGGGACCAACCAGGTCAAATCAGCCTGGAAGACGTTCAATTAGCGACAAAGAATCAGCCCCCCTCGCTGGTCGCC
AAGCGACTGGATTTAGGCCTCAGCCTGCGCCAACTTACCGAGCCGCGTTATTTCCATAGCGTAACGCTACGAGACGGTAC
GCTTAAGCTACCTCAGCAAAATGCTGTATTGCCGATTCAGGCCGATGTGCTGCAACTGAGCAATATGGCACTGCAAGTCA
ACGATGAAATCTGGCAGCTCAATGCGCAACGGGTCAATGCCGGTATTACGCCATGGCAACCGAAAGCCGGTCATCCCTTG
GGTGAGAACCATCAATTCCAGTTCAGCGCCGGTTCCATGACGCTGAACGGCATCCCCGCCTCTCAGGTATTGGTACAGGG
CGAACTCAAACAAAACCAGTTGCTGCTCAGCAACTTCGGCGCCGATCTGGCGCAAGGTGATTTGACTGGCGTAGCCACCC
GCGCCGCCAATGGCAGTTGGCAGGTAGAACGCCTGCGGCTGAGTGGCGTACGTATGCAGACACCACTGACGCTGGAACAG
TTCTGGCAGCGCTTTACTGCCCTGCCGCCGATCACACTCAAACGTTTTGATTTGATCGATGCGCGGCTGGAAGGCAAAGA
ATGGGCATTCAACGATCTCGATCTGTCGCTGCAAAACGTCACCTTCCAGCAGGGCGACTGGAGCAGTCCGGACGGTTCAC
TGAACTTCAACGCCAGCGATTTGATCAACGGCGGCTTCCACCTGATTGATCCAATCATGAATATGCGCCTCTCGCCGGCC
GGCATTGCCATTCAACAGTTCACCACCCGCTGGGAAGGCGGGCTGTTGCGCACTTCCGGCAACTGGCTGCGCGCCAATAA
CCGACTGCAACTCGATGAGGTGGCGGTCGCCGCGTTGGAATACACCTTGCCGAGCAACTGGCGCGGGCTGTGGCTACAAA
CGCTGCCACACTGGTTGGCGGAGGTATACGTCAACAAGCTGACTACCAACCGCAACCTGATCATCGATATCAATCCGGCC
TTCCCGTTCCAGGTAACCGCGCTGGACGGCTACGGCAGTAACCTGCTGCTGGCACGCGACCACCAATGGGGCATCTGGTC
CGGTACGCTGAACCTCAATGGCAGCGAAGCCACCTTCAACAAGATAGACGTTCGCCGACCATCGCTGGCGCTGAACGCCA
ATGACGGGCAGATCAACGTCACCGATCTCAGTGCCTTTATGCCGCAGGGATTGCTGGAAGCCAAAGCCACCATCGAGCAA
CTGCCGGGCAAACCCTTTACGCTGTCGCTGAACGGGCGCTCGGTACCGGTGAACACCCTGCAACAATGGGGATGGCAGCA
GGTACCACTGGAAGGTGACGGTAACCTGCAATTACAGTTGAAAGGTCTACTGAACAGCGACGGGCCGTTTAAGTCTTCTT
TGCAGGGCCGGCTGCAGGCCACCAGCAAAAACGGGCAAACACTGGAACAACAACTGCCTTGA

Upstream 100 bases:

>100_bases
GCGGCCGTTTTTTTATTGCCTATCAGACCATTGCACTTGAGATGCCCGGCCAATTGCGGCATAAACAGGGTATCTTTTTT
GACCGACGCGGATGTAGACG

Downstream 100 bases:

>100_bases
TGGAAAGGGGCGGCCTACCCGCGTGATTTAGCGTGGTGTGCCGCCCAATAACCGATATAAGCTGAAAACCCCATCTTAAA
TACCCTTACTCACCTTAAAA

Product: AsmA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKFIGKLLLTLLLLVVLAIALLYVIGQTRWAAGYLSRWVSDNSEYRLSVAKISHSWDQPGQISLEDVQLATKNQPPSLVA
KRLDLGLSLRQLTEPRYFHSVTLRDGTLKLPQQNAVLPIQADVLQLSNMALQVNDEIWQLNAQRVNAGITPWQPKAGHPL
GENHQFQFSAGSMTLNGIPASQVLVQGELKQNQLLLSNFGADLAQGDLTGVATRAANGSWQVERLRLSGVRMQTPLTLEQ
FWQRFTALPPITLKRFDLIDARLEGKEWAFNDLDLSLQNVTFQQGDWSSPDGSLNFNASDLINGGFHLIDPIMNMRLSPA
GIAIQQFTTRWEGGLLRTSGNWLRANNRLQLDEVAVAALEYTLPSNWRGLWLQTLPHWLAEVYVNKLTTNRNLIIDINPA
FPFQVTALDGYGSNLLLARDHQWGIWSGTLNLNGSEATFNKIDVRRPSLALNANDGQINVTDLSAFMPQGLLEAKATIEQ
LPGKPFTLSLNGRSVPVNTLQQWGWQQVPLEGDGNLQLQLKGLLNSDGPFKSSLQGRLQATSKNGQTLEQQLP

Sequences:

>Translated_553_residues
MKFIGKLLLTLLLLVVLAIALLYVIGQTRWAAGYLSRWVSDNSEYRLSVAKISHSWDQPGQISLEDVQLATKNQPPSLVA
KRLDLGLSLRQLTEPRYFHSVTLRDGTLKLPQQNAVLPIQADVLQLSNMALQVNDEIWQLNAQRVNAGITPWQPKAGHPL
GENHQFQFSAGSMTLNGIPASQVLVQGELKQNQLLLSNFGADLAQGDLTGVATRAANGSWQVERLRLSGVRMQTPLTLEQ
FWQRFTALPPITLKRFDLIDARLEGKEWAFNDLDLSLQNVTFQQGDWSSPDGSLNFNASDLINGGFHLIDPIMNMRLSPA
GIAIQQFTTRWEGGLLRTSGNWLRANNRLQLDEVAVAALEYTLPSNWRGLWLQTLPHWLAEVYVNKLTTNRNLIIDINPA
FPFQVTALDGYGSNLLLARDHQWGIWSGTLNLNGSEATFNKIDVRRPSLALNANDGQINVTDLSAFMPQGLLEAKATIEQ
LPGKPFTLSLNGRSVPVNTLQQWGWQQVPLEGDGNLQLQLKGLLNSDGPFKSSLQGRLQATSKNGQTLEQQLP
>Mature_553_residues
MKFIGKLLLTLLLLVVLAIALLYVIGQTRWAAGYLSRWVSDNSEYRLSVAKISHSWDQPGQISLEDVQLATKNQPPSLVA
KRLDLGLSLRQLTEPRYFHSVTLRDGTLKLPQQNAVLPIQADVLQLSNMALQVNDEIWQLNAQRVNAGITPWQPKAGHPL
GENHQFQFSAGSMTLNGIPASQVLVQGELKQNQLLLSNFGADLAQGDLTGVATRAANGSWQVERLRLSGVRMQTPLTLEQ
FWQRFTALPPITLKRFDLIDARLEGKEWAFNDLDLSLQNVTFQQGDWSSPDGSLNFNASDLINGGFHLIDPIMNMRLSPA
GIAIQQFTTRWEGGLLRTSGNWLRANNRLQLDEVAVAALEYTLPSNWRGLWLQTLPHWLAEVYVNKLTTNRNLIIDINPA
FPFQVTALDGYGSNLLLARDHQWGIWSGTLNLNGSEATFNKIDVRRPSLALNANDGQINVTDLSAFMPQGLLEAKATIEQ
LPGKPFTLSLNGRSVPVNTLQQWGWQQVPLEGDGNLQLQLKGLLNSDGPFKSSLQGRLQATSKNGQTLEQQLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=552, Percent_Identity=51.268115942029, Blast_Score=595, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 61434; Mature: 61434

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIGKLLLTLLLLVVLAIALLYVIGQTRWAAGYLSRWVSDNSEYRLSVAKISHSWDQPG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC
QISLEDVQLATKNQPPSLVAKRLDLGLSLRQLTEPRYFHSVTLRDGTLKLPQQNAVLPIQ
CEEHHHEEEECCCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEEECCEEECCCCCCEEEEH
ADVLQLSNMALQVNDEIWQLNAQRVNAGITPWQPKAGHPLGENHQFQFSAGSMTLNGIPA
HHHHHHCCEEEEECCHHEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCH
SQVLVQGELKQNQLLLSNFGADLAQGDLTGVATRAANGSWQVERLRLSGVRMQTPLTLEQ
HHEEEECCCCCCEEEHHHCCCCHHCCCCCEEEEECCCCCEEEEEEEECCEEEECCCCHHH
FWQRFTALPPITLKRFDLIDARLEGKEWAFNDLDLSLQNVTFQQGDWSSPDGSLNFNASD
HHHHHHCCCCCEEEHEEEEHHEECCCCEECCCCCEEEEEEEEECCCCCCCCCCEECCHHH
LINGGFHLIDPIMNMRLSPAGIAIQQFTTRWEGGLLRTSGNWLRANNRLQLDEVAVAALE
HCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHCCCEEEECCCEEECCCCEEHHHHHEEHHE
YTLPSNWRGLWLQTLPHWLAEVYVNKLTTNRNLIIDINPAFPFQVTALDGYGSNLLLARD
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEC
HQWGIWSGTLNLNGSEATFNKIDVRRPSLALNANDGQINVTDLSAFMPQGLLEAKATIEQ
CCCEEEEEEEECCCCCCEECEEECCCCCEEEECCCCEEEEEEHHHHCCCHHHHHHHHHHH
LPGKPFTLSLNGRSVPVNTLQQWGWQQVPLEGDGNLQLQLKGLLNSDGPFKSSLQGRLQA
CCCCCEEEEECCCCCCHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCHHHHCCEEEE
TSKNGQTLEQQLP
CCCCCCCHHHHCC
>Mature Secondary Structure
MKFIGKLLLTLLLLVVLAIALLYVIGQTRWAAGYLSRWVSDNSEYRLSVAKISHSWDQPG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC
QISLEDVQLATKNQPPSLVAKRLDLGLSLRQLTEPRYFHSVTLRDGTLKLPQQNAVLPIQ
CEEHHHEEEECCCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEEECCEEECCCCCCEEEEH
ADVLQLSNMALQVNDEIWQLNAQRVNAGITPWQPKAGHPLGENHQFQFSAGSMTLNGIPA
HHHHHHCCEEEEECCHHEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCCH
SQVLVQGELKQNQLLLSNFGADLAQGDLTGVATRAANGSWQVERLRLSGVRMQTPLTLEQ
HHEEEECCCCCCEEEHHHCCCCHHCCCCCEEEEECCCCCEEEEEEEECCEEEECCCCHHH
FWQRFTALPPITLKRFDLIDARLEGKEWAFNDLDLSLQNVTFQQGDWSSPDGSLNFNASD
HHHHHHCCCCCEEEHEEEEHHEECCCCEECCCCCEEEEEEEEECCCCCCCCCCEECCHHH
LINGGFHLIDPIMNMRLSPAGIAIQQFTTRWEGGLLRTSGNWLRANNRLQLDEVAVAALE
HCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHCCCEEEECCCEEECCCCEEHHHHHEEHHE
YTLPSNWRGLWLQTLPHWLAEVYVNKLTTNRNLIIDINPAFPFQVTALDGYGSNLLLARD
ECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEC
HQWGIWSGTLNLNGSEATFNKIDVRRPSLALNANDGQINVTDLSAFMPQGLLEAKATIEQ
CCCEEEEEEEECCCCCCEECEEECCCCCEEEECCCCEEEEEEHHHHCCCHHHHHHHHHHH
LPGKPFTLSLNGRSVPVNTLQQWGWQQVPLEGDGNLQLQLKGLLNSDGPFKSSLQGRLQA
CCCCCEEEEECCCCCCHHHHHHCCCEECCCCCCCCEEEEEEEECCCCCCCHHHHCCEEEE
TSKNGQTLEQQLP
CCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]