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The map label for this gene is rfaZ [C]

Identifier: 157373060

GI number: 157373060

Start: 5348060

End: 5348962

Strand: Direct

Name: rfaZ [C]

Synonym: Spro_4828

Alternate gene names: 157373060

Gene position: 5348060-5348962 (Clockwise)

Preceding gene: 157373059

Following gene: 157373061

Centisome position: 98.15

GC content: 43.41

Gene sequence:

>903_bases
ATGGGAACATTCTTCAAGCAGATATATCGCTATACTCATACTCGTCCTTTTCGGCATAACGAAAACCTCTGGCCCTACGT
AAAGATTAAACGCGCTGCCAGCGGAGAAATCGTCGAACTACGGTACAAAAAGCAACATGTACCGCTAGAACAGTTAGCCG
ATTTAAAGGGACAATTCGCTGGTGATATCTTGCTAACAGCCACCGGTCCGTCGGTGAAAAATCTTCACTTGGAAAAATTT
CCGAGCATGCCAGCAATGGGCGTCAATGGCGCTTATTTTCTGCACGATCGAGTGGATTTTAGATTTTATGTCATTGTCGA
TATTGGGTTTATAGATCAAAAACCGGAGATCATCAGCGATATTATCGATGATCAACGGCTGACGCTGTTTACCACGGTGC
ACAGCGTGGCTAAGATCATCGACAGGTTCGGGCTGGAGCGAGTGAAATGCCGTCTTGCGGTGATAGAGGACGCTGCATTC
AAAATCTATCAACCCAAAATTACCAATGATGAACTCTGGTCAGTCTACCAAGATAATCGTGATGTCATTTTCGCCACTGA
ACGAAAGGATATTGCCTTCAATCATGATATTCGCAGCGGCGTCTTCGACGCTGGAACAGTAGCTTACTGGGCTTTACAGA
TCCTGACTTTCTTAGGTTTTGAACGGTTGTATATTATTGGGCTGGATATGAATAACTTCCACCAGCCACGATTTTATGAG
GCTGCAGATAATAAATTGCCAACTCAGCTCGAAAACAAGGTTACCGTGCAAGTTATGCCTTCTTTCAGCCATGCCAGCAA
ATTGATGAAGGCCAAGAATATTATTATAAAAAACCTTTCCATCACCAGTGCTATCAGTAATGATATTTTCGACAAGGTCG
ACCCGGATGAAATATTCAAATAA

Upstream 100 bases:

>100_bases
GTCAGAATCAGTTTGCCTGCCGTCCCACTCATGGCAACAGTATGGCGGACATTACTGCACAAAAAGTTGCTGAGCTCATT
TGTGAAAGGATGACCGTATA

Downstream 100 bases:

>100_bases
CCCTTACTACGTACAAAAATTGTATGTAGTATTTTTTTTCCTTTTTTCATTTTTCAGCGCTATTTTCTATAGCTATACGA
AAGTTAATAATTTATTTCAT

Product: putative lipopolysaccharide glycosyltransferase

Products: NA

Alternate protein names: Lipopolysaccharide Core Biosynthesis Protein RfaZ; Lipopolysaccharide Core Biosynthesis Protein; LOW QUALITY PROTEIN Protein

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MGTFFKQIYRYTHTRPFRHNENLWPYVKIKRAASGEIVELRYKKQHVPLEQLADLKGQFAGDILLTATGPSVKNLHLEKF
PSMPAMGVNGAYFLHDRVDFRFYVIVDIGFIDQKPEIISDIIDDQRLTLFTTVHSVAKIIDRFGLERVKCRLAVIEDAAF
KIYQPKITNDELWSVYQDNRDVIFATERKDIAFNHDIRSGVFDAGTVAYWALQILTFLGFERLYIIGLDMNNFHQPRFYE
AADNKLPTQLENKVTVQVMPSFSHASKLMKAKNIIIKNLSITSAISNDIFDKVDPDEIFK

Sequences:

>Translated_300_residues
MGTFFKQIYRYTHTRPFRHNENLWPYVKIKRAASGEIVELRYKKQHVPLEQLADLKGQFAGDILLTATGPSVKNLHLEKF
PSMPAMGVNGAYFLHDRVDFRFYVIVDIGFIDQKPEIISDIIDDQRLTLFTTVHSVAKIIDRFGLERVKCRLAVIEDAAF
KIYQPKITNDELWSVYQDNRDVIFATERKDIAFNHDIRSGVFDAGTVAYWALQILTFLGFERLYIIGLDMNNFHQPRFYE
AADNKLPTQLENKVTVQVMPSFSHASKLMKAKNIIIKNLSITSAISNDIFDKVDPDEIFK
>Mature_299_residues
GTFFKQIYRYTHTRPFRHNENLWPYVKIKRAASGEIVELRYKKQHVPLEQLADLKGQFAGDILLTATGPSVKNLHLEKFP
SMPAMGVNGAYFLHDRVDFRFYVIVDIGFIDQKPEIISDIIDDQRLTLFTTVHSVAKIIDRFGLERVKCRLAVIEDAAFK
IYQPKITNDELWSVYQDNRDVIFATERKDIAFNHDIRSGVFDAGTVAYWALQILTFLGFERLYIIGLDMNNFHQPRFYEA
ADNKLPTQLENKVTVQVMPSFSHASKLMKAKNIIIKNLSITSAISNDIFDKVDPDEIFK

Specific function: Not Known. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34671; Mature: 34540

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTFFKQIYRYTHTRPFRHNENLWPYVKIKRAASGEIVELRYKKQHVPLEQLADLKGQFA
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCC
GDILLTATGPSVKNLHLEKFPSMPAMGVNGAYFLHDRVDFRFYVIVDIGFIDQKPEIISD
CCEEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHH
IIDDQRLTLFTTVHSVAKIIDRFGLERVKCRLAVIEDAAFKIYQPKITNDELWSVYQDNR
HHCCCCEEHHHHHHHHHHHHHHHCHHHHHHEEEEEECCEEEEECCCCCCCHHHHHEECCC
DVIFATERKDIAFNHDIRSGVFDAGTVAYWALQILTFLGFERLYIIGLDMNNFHQPRFYE
CEEEEECCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEC
AADNKLPTQLENKVTVQVMPSFSHASKLMKAKNIIIKNLSITSAISNDIFDKVDPDEIFK
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure 
GTFFKQIYRYTHTRPFRHNENLWPYVKIKRAASGEIVELRYKKQHVPLEQLADLKGQFA
CHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHCCCCC
GDILLTATGPSVKNLHLEKFPSMPAMGVNGAYFLHDRVDFRFYVIVDIGFIDQKPEIISD
CCEEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHH
IIDDQRLTLFTTVHSVAKIIDRFGLERVKCRLAVIEDAAFKIYQPKITNDELWSVYQDNR
HHCCCCEEHHHHHHHHHHHHHHHCHHHHHHEEEEEECCEEEEECCCCCCCHHHHHEECCC
DVIFATERKDIAFNHDIRSGVFDAGTVAYWALQILTFLGFERLYIIGLDMNNFHQPRFYE
CEEEEECCCCEEECCCHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEC
AADNKLPTQLENKVTVQVMPSFSHASKLMKAKNIIIKNLSITSAISNDIFDKVDPDEIFK
CCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA