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The map label for this gene is ydcL [H]

Identifier: 157373045

GI number: 157373045

Start: 5331799

End: 5332470

Strand: Direct

Name: ydcL [H]

Synonym: Spro_4813

Alternate gene names: 157373045

Gene position: 5331799-5332470 (Clockwise)

Preceding gene: 157373044

Following gene: 157373051

Centisome position: 97.85

GC content: 52.53

Gene sequence:

>672_bases
ATGAAAAAACAACGCTTGAGCGTTGCCATGGCGGCATTGGCAGTGAGTTTGTTGCTGGCGGGTTGTTCGTCCAAAGTGAC
CACTACAAAGCAGTACTCGGGGTTCCTGTCTGACTACAGCAAATTGCAAGAAACGACGTCGCCAAGCGGCCATAAAACGC
TGCGTTGGATCGACCCAAGCTACAAAGAATCCAACTACCGCGGCCTGTATTTCCAGCCGGTCGTCTATTTCCCAGCGGAA
AAACCGACCACACGTGTGAGCCAGGACACGCTGAATAAAATCAAGGCCTATTCCACCCAGCGGATAAAAGCTGCGCTTCA
GGATCGCTTTACCATCCTGAAAAGTCCGGCCGGTTCGCGCGTTCTGGTGGCCAAACTCGCCATTACCGCCGTCTCCGCTG
AAGATGAAGACATGAAATTCTATGAGGTTGTTCCAGTTGCCGCGGTGGTTGCCGGCACCATGGCTGCCAGTGGCCACAGA
ACTCAAAACACCACGCTTTATATTGAAGGTGAGTTGATCGATCAGGACACCGGTAAAACAGTGCTGGAAGTCGTGCGTAA
AACCTATGGCAAAACCGTTAGCAACGACAGCACGCCGGTCACTGCAGAGGATGTGAAAGCGGCGATCGACGACGTCGTCA
CCGATATCACCAACTTCCCTAAACAGGGTTAA

Upstream 100 bases:

>100_bases
GCCCCGTAACATGGCACGCACAGCGCCAAAACATTCGCTATGGCAGAAGATAATGAGCTATCTTTTGTAAGGGTTATCGG
CACTCATCATAGGAAATCGT

Downstream 100 bases:

>100_bases
TCCCCCGTCAGAAAGCATCAGGGGAGCTGAAGCTCCCCTGAATTTATTCTTGAACCCACCGGATTAAATACCGTCGCCGT
ACTCAAAACCGTGGTTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKKQRLSVAMAALAVSLLLAGCSSKVTTTKQYSGFLSDYSKLQETTSPSGHKTLRWIDPSYKESNYRGLYFQPVVYFPAE
KPTTRVSQDTLNKIKAYSTQRIKAALQDRFTILKSPAGSRVLVAKLAITAVSAEDEDMKFYEVVPVAAVVAGTMAASGHR
TQNTTLYIEGELIDQDTGKTVLEVVRKTYGKTVSNDSTPVTAEDVKAAIDDVVTDITNFPKQG

Sequences:

>Translated_223_residues
MKKQRLSVAMAALAVSLLLAGCSSKVTTTKQYSGFLSDYSKLQETTSPSGHKTLRWIDPSYKESNYRGLYFQPVVYFPAE
KPTTRVSQDTLNKIKAYSTQRIKAALQDRFTILKSPAGSRVLVAKLAITAVSAEDEDMKFYEVVPVAAVVAGTMAASGHR
TQNTTLYIEGELIDQDTGKTVLEVVRKTYGKTVSNDSTPVTAEDVKAAIDDVVTDITNFPKQG
>Mature_223_residues
MKKQRLSVAMAALAVSLLLAGCSSKVTTTKQYSGFLSDYSKLQETTSPSGHKTLRWIDPSYKESNYRGLYFQPVVYFPAE
KPTTRVSQDTLNKIKAYSTQRIKAALQDRFTILKSPAGSRVLVAKLAITAVSAEDEDMKFYEVVPVAAVVAGTMAASGHR
TQNTTLYIEGELIDQDTGKTVLEVVRKTYGKTVSNDSTPVTAEDVKAAIDDVVTDITNFPKQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787701, Length=210, Percent_Identity=49.047619047619, Blast_Score=211, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021747 [H]

Pfam domain/function: PF11769 DUF3313 [H]

EC number: NA

Molecular weight: Translated: 24371; Mature: 24371

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQRLSVAMAALAVSLLLAGCSSKVTTTKQYSGFLSDYSKLQETTSPSGHKTLRWIDPS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
YKESNYRGLYFQPVVYFPAEKPTTRVSQDTLNKIKAYSTQRIKAALQDRFTILKSPAGSR
CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VLVAKLAITAVSAEDEDMKFYEVVPVAAVVAGTMAASGHRTQNTTLYIEGELIDQDTGKT
EEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHH
VLEVVRKTYGKTVSNDSTPVTAEDVKAAIDDVVTDITNFPKQG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKQRLSVAMAALAVSLLLAGCSSKVTTTKQYSGFLSDYSKLQETTSPSGHKTLRWIDPS
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC
YKESNYRGLYFQPVVYFPAEKPTTRVSQDTLNKIKAYSTQRIKAALQDRFTILKSPAGSR
CCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VLVAKLAITAVSAEDEDMKFYEVVPVAAVVAGTMAASGHRTQNTTLYIEGELIDQDTGKT
EEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCHH
VLEVVRKTYGKTVSNDSTPVTAEDVKAAIDDVVTDITNFPKQG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]