| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yiiQ [H]
Identifier: 157373036
GI number: 157373036
Start: 5323437
End: 5324042
Strand: Direct
Name: yiiQ [H]
Synonym: Spro_4804
Alternate gene names: 157373036
Gene position: 5323437-5324042 (Clockwise)
Preceding gene: 157373034
Following gene: 157373037
Centisome position: 97.7
GC content: 57.1
Gene sequence:
>606_bases ATGCCGTGTTATACCATGCTGAGAAAAACCATCGCCATCGCCTGCCTGTTGCTGAGTATCAGCAGCGCCTGGGCCGATCC GCCGGATGCCGCCGTCAGTGCATCGCCCACCGCGCCGTATCTGCTGGCCGGGGCACCGACCTTTGATCTGACGGTGGTCA AATTCCGCGAAAAATATAACCGCGACAACCCGACGCTGCCGATTGGCGAATTTCGCGCCATCGCAACCGCAGAGGACGAT ACGCCACTGCTGACGCGTGCCGCCAGCAAGCTGAACGAAAATCTCTACGCCTCCACTGCGCTGGAAAAGGGCACCGGCAA AATCAAAACGCTGCAAATTACCCATCTGCCTCTGCAGCAAAGTAGCGAAGAAAAGGCGGCCCGCACCATTGCCATCAACT ATATGGCCGCACTGATGCGCCAGTTTGAACCGGCGCTGACGGTGGAAAAAAGCCTGAGCAAAGTGGCCAACCTGCTGGAG AAAGGCAAAGGGTCACGCTTTTACCAACAGCAGGTCGGTGCGATCCGTTATGTGGTCGCGGACAACGGCGATAAAGGGGT AACTTTCGCTGTTGAACCGGTTAAGCTGACGCTATCCGAGCCGTAA
Upstream 100 bases:
>100_bases CGGAGTAACGCACAGCTTTCCTGTCAGCAAGCGATAATGGCGCGGGATCTTTGACAATCCCCCTGGGTTATCGCTTTAAT CGGAGCCATCTTTGTTCTTG
Downstream 100 bases:
>100_bases CAGCCGGTCATTTAATGACGAAAAGCAAAGCCTTCGCGCTTAATCATCTCTATACTGTTGGGCAGGTAAACTGCCGGTCC GGCAGTGGTTATTTCGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPCYTMLRKTIAIACLLLSISSAWADPPDAAVSASPTAPYLLAGAPTFDLTVVKFREKYNRDNPTLPIGEFRAIATAEDD TPLLTRAASKLNENLYASTALEKGTGKIKTLQITHLPLQQSSEEKAARTIAINYMAALMRQFEPALTVEKSLSKVANLLE KGKGSRFYQQQVGAIRYVVADNGDKGVTFAVEPVKLTLSEP
Sequences:
>Translated_201_residues MPCYTMLRKTIAIACLLLSISSAWADPPDAAVSASPTAPYLLAGAPTFDLTVVKFREKYNRDNPTLPIGEFRAIATAEDD TPLLTRAASKLNENLYASTALEKGTGKIKTLQITHLPLQQSSEEKAARTIAINYMAALMRQFEPALTVEKSLSKVANLLE KGKGSRFYQQQVGAIRYVVADNGDKGVTFAVEPVKLTLSEP >Mature_200_residues PCYTMLRKTIAIACLLLSISSAWADPPDAAVSASPTAPYLLAGAPTFDLTVVKFREKYNRDNPTLPIGEFRAIATAEDDT PLLTRAASKLNENLYASTALEKGTGKIKTLQITHLPLQQSSEEKAARTIAINYMAALMRQFEPALTVEKSLSKVANLLEK GKGSRFYQQQVGAIRYVVADNGDKGVTFAVEPVKLTLSEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790354, Length=189, Percent_Identity=56.0846560846561, Blast_Score=201, Evalue=3e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009918 [H]
Pfam domain/function: PF07305 DUF1454 [H]
EC number: NA
Molecular weight: Translated: 21834; Mature: 21703
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCYTMLRKTIAIACLLLSISSAWADPPDAAVSASPTAPYLLAGAPTFDLTVVKFREKYN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHC RDNPTLPIGEFRAIATAEDDTPLLTRAASKLNENLYASTALEKGTGKIKTLQITHLPLQQ CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCC SSEEKAARTIAINYMAALMRQFEPALTVEKSLSKVANLLEKGKGSRFYQQQVGAIRYVVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEE DNGDKGVTFAVEPVKLTLSEP CCCCCCEEEEEEEEEEEECCC >Mature Secondary Structure PCYTMLRKTIAIACLLLSISSAWADPPDAAVSASPTAPYLLAGAPTFDLTVVKFREKYN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHC RDNPTLPIGEFRAIATAEDDTPLLTRAASKLNENLYASTALEKGTGKIKTLQITHLPLQQ CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCC SSEEKAARTIAINYMAALMRQFEPALTVEKSLSKVANLLEKGKGSRFYQQQVGAIRYVVA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCEEEEEEE DNGDKGVTFAVEPVKLTLSEP CCCCCCEEEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]