| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is metA
Identifier: 157372737
GI number: 157372737
Start: 4992491
End: 4993420
Strand: Reverse
Name: metA
Synonym: Spro_4504
Alternate gene names: 157372737
Gene position: 4993420-4992491 (Counterclockwise)
Preceding gene: 157372739
Following gene: 157372736
Centisome position: 91.64
GC content: 51.08
Gene sequence:
>930_bases ATGCCGATTCGTGTTCCTGATGAGTTACCTGCAGTCAGTTTTTTGCGCAATGAGAATGTCTTTGTCATGGCATCCTCTCG GGCAAAAACACAGGAAATCAGGCCATTGAAAGTATTGATCCTCAACCTGATGCCAAAAAAGATCGAGACGGAAAACCAGT TTTTACGTCTACTTTCCAACTCTCCGCTGCAAATCGACATTCAGCTGCTGCGTATCGACAGCCGTGAGTCAAAGAACACG CCGGCGGAGCATTTGAATAACTTTTACTGTGATTTTGAAGATATTCAGGATGAGAATTTCGACGGATTGATTGTCACCGG GGCGCCGCTGGGGCTGGTCGATTTCTGTGACGTTGCCTACTGGCCACAGATCGAACGGGTGATTGACTGGGCCAAGAATC ACGTCACCTCCACGCTGTTTGTATGCTGGGCGGTGCAGGCGGCATTGAACATTCTGTATGGTATTCCAAAGATGACGCGC GAAGTGAAACTGTCGGGGGTTTATCAGCACCAGACGCTGCAGCAGCACGCCTTGCTGACTCGCGGTTTTGATGAGACCTT CCTCGCGCCTCACTCACGCTATGCAGACTTTCCTACGGAGATTATCCGTCAGTATACGGATCTGGATATCCTGGCCGAAT CAGAACAAACCGGGGCCTATTTGTTCGCCAGTAAGGACAAGCGGCTGGCGTTTGTGACCGGTCACCCGGAGTATGATGCG CTAACGTTAGCTGGCGAGTATTGTCGCGATAACGATGCCGGTCTTAATCCTGTGGTACCGCTGAATTACTTCCCCGATGA TAACCCCGAACTCACCCCCAAAGCGTCCTGGCGCAGCCATGGTCATCTGTTGTTTGCCAACTGGCTCAACTACTACGTTT ACCAGATCACGCCGTACGATCTGCGTCATATGAACCCTACCCTCGAGTAA
Upstream 100 bases:
>100_bases TTTTCACCTTCCGGTTGAACGCTCGACATCCTGCTAAAAAAACGCTATCTTCGGGCATCTAGAAGTCTAAACGTTTAAAT GGATGTGTGAGGGTTAAGCA
Downstream 100 bases:
>100_bases TCCTTTTTCCCTAATCGGCGGCTGAATCGAGGCCGCCGACGCAATCTCTTCCCCATCCGTCTTCCTCATTTCACTCTCTT TTCTAGCAAAAACCATTGTT
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQIDIQLLRIDSRESKNT PAEHLNNFYCDFEDIQDENFDGLIVTGAPLGLVDFCDVAYWPQIERVIDWAKNHVTSTLFVCWAVQAALNILYGIPKMTR EVKLSGVYQHQTLQQHALLTRGFDETFLAPHSRYADFPTEIIRQYTDLDILAESEQTGAYLFASKDKRLAFVTGHPEYDA LTLAGEYCRDNDAGLNPVVPLNYFPDDNPELTPKASWRSHGHLLFANWLNYYVYQITPYDLRHMNPTLE
Sequences:
>Translated_309_residues MPIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQIDIQLLRIDSRESKNT PAEHLNNFYCDFEDIQDENFDGLIVTGAPLGLVDFCDVAYWPQIERVIDWAKNHVTSTLFVCWAVQAALNILYGIPKMTR EVKLSGVYQHQTLQQHALLTRGFDETFLAPHSRYADFPTEIIRQYTDLDILAESEQTGAYLFASKDKRLAFVTGHPEYDA LTLAGEYCRDNDAGLNPVVPLNYFPDDNPELTPKASWRSHGHLLFANWLNYYVYQITPYDLRHMNPTLE >Mature_308_residues PIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQIDIQLLRIDSRESKNTP AEHLNNFYCDFEDIQDENFDGLIVTGAPLGLVDFCDVAYWPQIERVIDWAKNHVTSTLFVCWAVQAALNILYGIPKMTRE VKLSGVYQHQTLQQHALLTRGFDETFLAPHSRYADFPTEIIRQYTDLDILAESEQTGAYLFASKDKRLAFVTGHPEYDAL TLAGEYCRDNDAGLNPVVPLNYFPDDNPELTPKASWRSHGHLLFANWLNYYVYQITPYDLRHMNPTLE
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=309, Percent_Identity=81.8770226537217, Blast_Score=535, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_SERP5 (A8GKF8)
Other databases:
- EMBL: CP000826 - RefSeq: YP_001480726.1 - ProteinModelPortal: A8GKF8 - SMR: A8GKF8 - STRING: A8GKF8 - GeneID: 5606217 - GenomeReviews: CP000826_GR - KEGG: spe:Spro_4504 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - ProtClustDB: PRK05368 - BioCyc: SPRO399741:SPRO_4504-MONOMER - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 35552; Mature: 35421
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSN CCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHCC SPLQIDIQLLRIDSRESKNTPAEHLNNFYCDFEDIQDENFDGLIVTGAPLGLVDFCDVAY CCCEEEEEEEEECCCCCCCCCHHHHHCEECCHHHCCCCCCCEEEEECCCCCHHHHHHHHH WPQIERVIDWAKNHVTSTLFVCWAVQAALNILYGIPKMTREVKLSGVYQHQTLQQHALLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHHHHHHHH RGFDETFLAPHSRYADFPTEIIRQYTDLDILAESEQTGAYLFASKDKRLAFVTGHPEYDA CCCCHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCEEEEEECCCEEEEEECCCCCCE LTLAGEYCRDNDAGLNPVVPLNYFPDDNPELTPKASWRSHGHLLFANWLNYYVYQITPYD EEEEHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHH LRHMNPTLE HHCCCCCCC >Mature Secondary Structure PIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSN CCCCCCCCCHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHCC SPLQIDIQLLRIDSRESKNTPAEHLNNFYCDFEDIQDENFDGLIVTGAPLGLVDFCDVAY CCCEEEEEEEEECCCCCCCCCHHHHHCEECCHHHCCCCCCCEEEEECCCCCHHHHHHHHH WPQIERVIDWAKNHVTSTLFVCWAVQAALNILYGIPKMTREVKLSGVYQHQTLQQHALLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEECCCHHHHHHHHHHHHHH RGFDETFLAPHSRYADFPTEIIRQYTDLDILAESEQTGAYLFASKDKRLAFVTGHPEYDA CCCCHHHCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCEEEEEECCCEEEEEECCCCCCE LTLAGEYCRDNDAGLNPVVPLNYFPDDNPELTPKASWRSHGHLLFANWLNYYVYQITPYD EEEEHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCHH LRHMNPTLE HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA