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The map label for this gene is yjbQ [H]

Identifier: 157372677

GI number: 157372677

Start: 4917745

End: 4918161

Strand: Reverse

Name: yjbQ [H]

Synonym: Spro_4444

Alternate gene names: 157372677

Gene position: 4918161-4917745 (Counterclockwise)

Preceding gene: 157372678

Following gene: 157372676

Centisome position: 90.26

GC content: 57.07

Gene sequence:

>417_bases
ATGTGGCATCAGCAAACGCTAATCCTCAGCGCAAAAGCGCGTGGTTTTCATCTGGTTACCGAAGAGATTACCGACCAGCT
AACCCACTTACACCGCCTGCAAACTGGCCTGTTGCACCTGTTGTTGCAACATACCTCGGCCTCGCTGACGCTGAACGAGA
ACTGCGATCCTACGGTGCGAGCCGACATGGAACAGCATTTCCTGCGTCAGGTGCCAGAGAACGCACCCTATCAGCACGAC
TATGAAGGGCCGGACGACATGCCGGCACACATCAAATCCTCTCTGTTGGGCACGTCCCTGACGTTGCCTGTCGGTCACGG
GCGACTGATGCTGGGCACATGGCAGGGAATTTGGCTGGGGGAGCACCGCATCCACGGCGGTTCACGCCGTATTGTGGCCA
CTTTACAGGGGGAATAA

Upstream 100 bases:

>100_bases
CAAGGGAGCGATAGCGATATCGCTCCCTTTTTGTTGTCGGTTTGCCGCCGGAGTTGCTGCAAACTGGATAGAGAATATAC
TGATTGAGGGGCGCTAACTC

Downstream 100 bases:

>100_bases
CCCAATGAATAACACAGCACTGCTGGAATACTGCATGGCGAAGCCGGGCGCGGAACAGAGCGACCAGAACCAGTGGCAGG
CCAGTCAGATCAAGGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MWHQQTLILSAKARGFHLVTEEITDQLTHLHRLQTGLLHLLLQHTSASLTLNENCDPTVRADMEQHFLRQVPENAPYQHD
YEGPDDMPAHIKSSLLGTSLTLPVGHGRLMLGTWQGIWLGEHRIHGGSRRIVATLQGE

Sequences:

>Translated_138_residues
MWHQQTLILSAKARGFHLVTEEITDQLTHLHRLQTGLLHLLLQHTSASLTLNENCDPTVRADMEQHFLRQVPENAPYQHD
YEGPDDMPAHIKSSLLGTSLTLPVGHGRLMLGTWQGIWLGEHRIHGGSRRIVATLQGE
>Mature_138_residues
MWHQQTLILSAKARGFHLVTEEITDQLTHLHRLQTGLLHLLLQHTSASLTLNENCDPTVRADMEQHFLRQVPENAPYQHD
YEGPDDMPAHIKSSLLGTSLTLPVGHGRLMLGTWQGIWLGEHRIHGGSRRIVATLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=138, Percent_Identity=76.8115942028985, Blast_Score=223, Evalue=3e-60,
Organism=Drosophila melanogaster, GI221476594, Length=136, Percent_Identity=55.1470588235294, Blast_Score=159, Evalue=4e-40,
Organism=Drosophila melanogaster, GI221476589, Length=136, Percent_Identity=55.1470588235294, Blast_Score=157, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15576; Mature: 15576

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWHQQTLILSAKARGFHLVTEEITDQLTHLHRLQTGLLHLLLQHTSASLTLNENCDPTVR
CCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
ADMEQHFLRQVPENAPYQHDYEGPDDMPAHIKSSLLGTSLTLPVGHGRLMLGTWQGIWLG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEC
EHRIHGGSRRIVATLQGE
CEEECCCCEEEEEEECCC
>Mature Secondary Structure
MWHQQTLILSAKARGFHLVTEEITDQLTHLHRLQTGLLHLLLQHTSASLTLNENCDPTVR
CCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHH
ADMEQHFLRQVPENAPYQHDYEGPDDMPAHIKSSLLGTSLTLPVGHGRLMLGTWQGIWLG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCEEEEEECCCEEEC
EHRIHGGSRRIVATLQGE
CEEECCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]