Click here to switch to the map view.

The map label for this gene is ssb [H]

Identifier: 157372672

GI number: 157372672

Start: 4911697

End: 4912242

Strand: Reverse

Name: ssb [H]

Synonym: Spro_4439

Alternate gene names: 157372672

Gene position: 4912242-4911697 (Counterclockwise)

Preceding gene: 157372675

Following gene: 157372669

Centisome position: 90.15

GC content: 59.71

Gene sequence:

>546_bases
ATGGCCAGCAGAGGCGTAAACAAAGTAATTCTGGTCGGGAATCTGGGCCAAGACCCAGAAGTCCGTTACATGCCGAATGG
CGGCGCAGTGGCCAACATTACCCTGGCGACCTCCGAAAGCTGGCGTGACAAGGCGACTGGCGAGCAGAAAGAAAAGACTG
AGTGGCACCGCGTTGTGCTGTTCGGCAAGCTGGCTGAAGTGGCGGGCGAATATCTGCGTAAAGGTTCCCAGGTGTATATC
GAGGGCGCTCTGCAAACCCGTAAGTGGACCGATCAGGCTGGCGTTGAAAAATACACCACCGAGATCGTTGTAAACGTGGG
CGGCACCATGCAGATGCTGGGCGGCCGTCAAGGCGGCGGTGCACCTGCAGGCGGTGGTCAGGCTTCCGGTGGTCAGGGCG
GTTGGGGTCAGCCTCAACAGCCTCAACAGCCGCAAGGCGGCAACCAGTTCAGCGGTGGCCAGCAGGCTCGCCCAGCGCAA
AACAATGCGCCGGCAGCCAGCAGCAACGAACCGCCAATGGACTTCGACGACGATATTCCTTTCTGA

Upstream 100 bases:

>100_bases
GAATAGAATACGCAGTTATCAACACGGGTGTCGTTTCGGGCTGAGCGTGTTAAACTTACTCGTTTATACTGTGTAAAAAT
CAATCTTCAGGAGAGTTCTC

Downstream 100 bases:

>100_bases
TATCAGGTTGTCTAAAGCCGATGAAAAAGCCCCGAAAGGGGCTTTTTTGTTTCTGAAGGAGGCTGCTTCACGCCAAACTC
ACTGCCCCACTGGGGCTTGT

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGALQTRKWTDQAGVEKYTTEIVVNVGGTMQMLGGRQGGGAPAGGGQASGGQGGWGQPQQPQQPQGGNQFSGGQQARPAQ
NNAPAASSNEPPMDFDDDIPF

Sequences:

>Translated_181_residues
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGALQTRKWTDQAGVEKYTTEIVVNVGGTMQMLGGRQGGGAPAGGGQASGGQGGWGQPQQPQQPQGGNQFSGGQQARPAQ
NNAPAASSNEPPMDFDDDIPF
>Mature_180_residues
ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIE
GALQTRKWTDQAGVEKYTTEIVVNVGGTMQMLGGRQGGGAPAGGGQASGGQGGWGQPQQPQQPQGGNQFSGGQQARPAQN
NAPAASSNEPPMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=111, Percent_Identity=34.2342342342342, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1790494, Length=181, Percent_Identity=84.5303867403315, Blast_Score=271, Evalue=3e-74,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 19114; Mature: 18983

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVL
CCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYIEGALQTRKWTDQAGVEKYTTEIVVNVGGTMQMLGGRQGGG
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCHHHEEEEEEEECCCEEEECCCCCCCC
APAGGGQASGGQGGWGQPQQPQQPQGGNQFSGGQQARPAQNNAPAASSNEPPMDFDDDIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure 
ASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVL
CCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
FGKLAEVAGEYLRKGSQVYIEGALQTRKWTDQAGVEKYTTEIVVNVGGTMQMLGGRQGGG
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHCHHHEEEEEEEECCCEEEECCCCCCCC
APAGGGQASGGQGGWGQPQQPQQPQGGNQFSGGQQARPAQNNAPAASSNEPPMDFDDDIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]