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The map label for this gene is yxaC [H]

Identifier: 157372660

GI number: 157372660

Start: 4900215

End: 4900904

Strand: Reverse

Name: yxaC [H]

Synonym: Spro_4427

Alternate gene names: 157372660

Gene position: 4900904-4900215 (Counterclockwise)

Preceding gene: 157372661

Following gene: 157372645

Centisome position: 89.94

GC content: 60.14

Gene sequence:

>690_bases
ATGAATGATTTTATCCTGAGCATCGCCTGCTTTGTGGCAACGCTGGCGCTCTATTTCGCCAATAAAAAACTCTACCGCCG
CCGTCGAACCTTGCTGTTGATGCCATTGGTACTGACGCCAATGATCCTGGTGCTGTTGCTGGTGGTGACCCATATTTCGT
ACCAGGACTACATTGGCGAAACGCACTGGTTGCTGTGGCTGCTGGGGCCGGCCACCATCGCCTTCGCGGTACCGGTATAC
GAGAATCTGCATATTATCCGCCGCCACTGGCTGTCGCTCAGCGCCGGAGTGCTGACGGCAGTGCTGGTGGCGGTTTACAG
CTCGGTGTGGCTGGCGCGACTGCTGACGCTGCCGGAAGAGGTGCAGCGCAGCCTGGCAGTGCGCTCCATCACCACGCCGT
TTGCGCTGGAGGCGGCCAAACAGATGGGCGGGCAGGCAGATCTGGTGGCGCTGTTTGTGGTGATCACCGGGGTGTTCGGC
ATGGCGGTTGGGGATATTTTGTTCCTGCGGCTGGCGGTGCGCAGCAGTCTGGCGAAAGGCGCCGGGCTCGGGGCGTCATC
ACACGGTGCCGGTACGGCAAAAGCCTATGAGATGGGGCAGGAAGAAGGGGTGGTTTCCAGCCTGGTGATGATGCTGGCGG
GGATTATCACGGTGATTGCCGCGCCGCTGATAGGGCAACTGATGTGGTAA

Upstream 100 bases:

>100_bases
GTGATTGCCGTCAGCACCACGCTGACGTTGGCCGCAACGGGGCTGGTGGTCGACCGGGTCTATCGACTGGAAGTCTGGTT
ACAACGGCGAAAACAGCGCG

Downstream 100 bases:

>100_bases
CTTTCTGATGAGAAGGCCATACCGGCATGGCCCCCATCATCCGCCGCTGTCAGAGAGTTGCGGCGGTCTTGATCAGCTCC
ACAACCAGTGGAGAAAGCTC

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNDFILSIACFVATLALYFANKKLYRRRRTLLLMPLVLTPMILVLLLVVTHISYQDYIGETHWLLWLLGPATIAFAVPVY
ENLHIIRRHWLSLSAGVLTAVLVAVYSSVWLARLLTLPEEVQRSLAVRSITTPFALEAAKQMGGQADLVALFVVITGVFG
MAVGDILFLRLAVRSSLAKGAGLGASSHGAGTAKAYEMGQEEGVVSSLVMMLAGIITVIAAPLIGQLMW

Sequences:

>Translated_229_residues
MNDFILSIACFVATLALYFANKKLYRRRRTLLLMPLVLTPMILVLLLVVTHISYQDYIGETHWLLWLLGPATIAFAVPVY
ENLHIIRRHWLSLSAGVLTAVLVAVYSSVWLARLLTLPEEVQRSLAVRSITTPFALEAAKQMGGQADLVALFVVITGVFG
MAVGDILFLRLAVRSSLAKGAGLGASSHGAGTAKAYEMGQEEGVVSSLVMMLAGIITVIAAPLIGQLMW
>Mature_229_residues
MNDFILSIACFVATLALYFANKKLYRRRRTLLLMPLVLTPMILVLLLVVTHISYQDYIGETHWLLWLLGPATIAFAVPVY
ENLHIIRRHWLSLSAGVLTAVLVAVYSSVWLARLLTLPEEVQRSLAVRSITTPFALEAAKQMGGQADLVALFVVITGVFG
MAVGDILFLRLAVRSSLAKGAGLGASSHGAGTAKAYEMGQEEGVVSSLVMMLAGIITVIAAPLIGQLMW

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=211, Percent_Identity=35.0710900473934, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24865; Mature: 24865

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDFILSIACFVATLALYFANKKLYRRRRTLLLMPLVLTPMILVLLLVVTHISYQDYIGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
THWLLWLLGPATIAFAVPVYENLHIIRRHWLSLSAGVLTAVLVAVYSSVWLARLLTLPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VQRSLAVRSITTPFALEAAKQMGGQADLVALFVVITGVFGMAVGDILFLRLAVRSSLAKG
HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGLGASSHGAGTAKAYEMGQEEGVVSSLVMMLAGIITVIAAPLIGQLMW
CCCCCCCCCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDFILSIACFVATLALYFANKKLYRRRRTLLLMPLVLTPMILVLLLVVTHISYQDYIGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
THWLLWLLGPATIAFAVPVYENLHIIRRHWLSLSAGVLTAVLVAVYSSVWLARLLTLPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VQRSLAVRSITTPFALEAAKQMGGQADLVALFVVITGVFGMAVGDILFLRLAVRSSLAKG
HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGLGASSHGAGTAKAYEMGQEEGVVSSLVMMLAGIITVIAAPLIGQLMW
CCCCCCCCCCCHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]