Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is ygiN [H]

Identifier: 157372494

GI number: 157372494

Start: 4725388

End: 4725696

Strand: Direct

Name: ygiN [H]

Synonym: Spro_4261

Alternate gene names: 157372494

Gene position: 4725388-4725696 (Clockwise)

Preceding gene: 157372493

Following gene: 157372501

Centisome position: 86.72

GC content: 53.72

Gene sequence:

>309_bases
ATGATCACCGTAATTGCAGAAATCAAAACCAAACCGGGCCACCGTGAAACGGTCCTGAAGGCGATTGAGAAACTGATCCC
GCTGGTGCTGGCAGAAGACGGCTGTAGCGAATATACGCCGATGATCGACAGCCACACCCAGGCACCCTGGCAAAAACTGT
CGCCGGACTCGGTGTTTATGCTGGAAAAATGGGCCAGCCAGGCGCACCTGGAAAAACATCTGGATATCGCTCACATGCAT
CGGCATCGTGACACCATCAAGGACAGCGTACTGGGCGTGACCATTCACGTACTGGGTAACGCACTGTAA

Upstream 100 bases:

>100_bases
TAAACAACCGGATATCGACAGCGACATCGCACGTTATCGCGAGCATCTGGCCGAAATTTTTGCTTAACTGGCACTATGCA
CGTCAATCAATGAGGTAGTG

Downstream 100 bases:

>100_bases
TGCCTGTCGATCTCTAAAGCATCTGCGCATCAATATGCGCGCTGACGTAGTCCAGGAAACAGGTAATACGCGCCGCCAGC
TGGGTATTGCGGTAATAGAC

Product: antibiotic biosynthesis monooxygenase

Products: NA

Alternate protein names: QuMo [H]

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFMLEKWASQAHLEKHLDIAHMH
RHRDTIKDSVLGVTIHVLGNAL

Sequences:

>Translated_102_residues
MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFMLEKWASQAHLEKHLDIAHMH
RHRDTIKDSVLGVTIHVLGNAL
>Mature_102_residues
MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFMLEKWASQAHLEKHLDIAHMH
RHRDTIKDSVLGVTIHVLGNAL

Specific function: Can oxidize menadiol to menadione [H]

COG id: COG1359

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789407, Length=100, Percent_Identity=46, Blast_Score=100, Evalue=2e-23,

Paralogues:

None

Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 11483; Mature: 11483

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFM
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH
LEKWASQAHLEKHLDIAHMHRHRDTIKDSVLGVTIHVLGNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MITVIAEIKTKPGHRETVLKAIEKLIPLVLAEDGCSEYTPMIDSHTQAPWQKLSPDSVFM
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCHHHH
LEKWASQAHLEKHLDIAHMHRHRDTIKDSVLGVTIHVLGNAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]