| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372386
Identifier: 157372386
GI number: 157372386
Start: 4606845
End: 4607429
Strand: Direct
Name: 157372386
Synonym: Spro_4153
Alternate gene names: NA
Gene position: 4606845-4607429 (Clockwise)
Preceding gene: 157372385
Following gene: 157372387
Centisome position: 84.55
GC content: 49.57
Gene sequence:
>585_bases ATGGTTAATAAAATCCTTTCTCTCACAGTATTGGCCGCTGCGATAAGCTCAGGCAGCGTGCTGGCGGCAGATCAATCCGC CGGTGGCATTATTTCGTTCTCTGGCGCGATTACCGATACCACCTGTACCATTAATGGCGGTAAAAGCGCGGACTTCACCG TTGCGCTCAGCCCGATTTCGGTCACCGATGCCGGCAACACCGTGGGGCCAATTATCAAAAACAAAAAGTCTTTTTCTCTC ACTTTCTCTAATTGTTCCCCGGCCTCCGGCACCTCTGGGCAACCGTTAAAGATCTATTTCTCTTCCGCTGACAATATTTC CACCGACGGCAAATATCTGCTGAATGATACTGTCAACGAACAAGATAATGCCGTCGCTAAAAATGTCGGTTTCTCTCTGG CTAATGCCTCCTCCTCAACCCCCATTGCGCTGAATCAGCCTTTCGTAACTGATATTCTCGGTAACAGCGCCGATCCGGAC TCGGAAACCCTCACGCTGGATGCGTATTACTACAAAACCAATACTGCAGCGGCCAAAGTCGGCGCACTGCATTCTAACGT GACCTATACCATTTCTTACCTGTAA
Upstream 100 bases:
>100_bases GCACTCAACAGGTCGAAAATCTGATATTTTCACGCGTGTTGATCAAGTCAATATATATCATCACACACCTATAACTCTCT ATATGGAATTTGGAGTCAAT
Downstream 100 bases:
>100_bases TTGAGTTATTCGCCAGGCTCAACGGATGAGCCTGGCCATCGGGAGAATTATGATAAAAAATATTCTATTAGCCGGGCTAG CCCTGGTGACGACTCACGCC
Product: fimbrial protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MVNKILSLTVLAAAISSGSVLAADQSAGGIISFSGAITDTTCTINGGKSADFTVALSPISVTDAGNTVGPIIKNKKSFSL TFSNCSPASGTSGQPLKIYFSSADNISTDGKYLLNDTVNEQDNAVAKNVGFSLANASSSTPIALNQPFVTDILGNSADPD SETLTLDAYYYKTNTAAAKVGALHSNVTYTISYL
Sequences:
>Translated_194_residues MVNKILSLTVLAAAISSGSVLAADQSAGGIISFSGAITDTTCTINGGKSADFTVALSPISVTDAGNTVGPIIKNKKSFSL TFSNCSPASGTSGQPLKIYFSSADNISTDGKYLLNDTVNEQDNAVAKNVGFSLANASSSTPIALNQPFVTDILGNSADPD SETLTLDAYYYKTNTAAAKVGALHSNVTYTISYL >Mature_194_residues MVNKILSLTVLAAAISSGSVLAADQSAGGIISFSGAITDTTCTINGGKSADFTVALSPISVTDAGNTVGPIIKNKKSFSL TFSNCSPASGTSGQPLKIYFSSADNISTDGKYLLNDTVNEQDNAVAKNVGFSLANASSSTPIALNQPFVTDILGNSADPD SETLTLDAYYYKTNTAAAKVGALHSNVTYTISYL
Specific function: Unknown
COG id: COG3539
COG function: function code NU; P pilus assembly protein, pilin FimA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19881; Mature: 19881
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKILSLTVLAAAISSGSVLAADQSAGGIISFSGAITDTTCTINGGKSADFTVALSPIS CCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCEEEEEEEECCCCCCEEEEEECCEE VTDAGNTVGPIIKNKKSFSLTFSNCSPASGTSGQPLKIYFSSADNISTDGKYLLNDTVNE EECCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCC QDNAVAKNVGFSLANASSSTPIALNQPFVTDILGNSADPDSETLTLDAYYYKTNTAAAKV CCCHHHHHCCEEEECCCCCCCEEECCCCHHHHHCCCCCCCCCEEEEEEEEEECCCCHHEE GALHSNVTYTISYL EEEECCEEEEEEEC >Mature Secondary Structure MVNKILSLTVLAAAISSGSVLAADQSAGGIISFSGAITDTTCTINGGKSADFTVALSPIS CCCHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCEEEEEEEECCCCCCEEEEEECCEE VTDAGNTVGPIIKNKKSFSLTFSNCSPASGTSGQPLKIYFSSADNISTDGKYLLNDTVNE EECCCCCCCHHCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCC QDNAVAKNVGFSLANASSSTPIALNQPFVTDILGNSADPDSETLTLDAYYYKTNTAAAKV CCCHHHHHCCEEEECCCCCCCEEECCCCHHHHHCCCCCCCCCEEEEEEEEEECCCCHHEE GALHSNVTYTISYL EEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA