| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is nagD [C]
Identifier: 157372299
GI number: 157372299
Start: 4505384
End: 4506190
Strand: Direct
Name: nagD [C]
Synonym: Spro_4065
Alternate gene names: 157372299
Gene position: 4505384-4506190 (Clockwise)
Preceding gene: 157372288
Following gene: 157372300
Centisome position: 82.68
GC content: 42.63
Gene sequence:
>807_bases ATGAAAAGAGATAAAAAGTGCCTTGCCTGTGTGGATGAATTGCCTGTATTCGAAGGTTATCTCGTAGACGTCTGGGGTGT CTTATACGATGGTCAGTCGAAAACTCATATTGCTGATGATCTGCTCCGGAAAATGAAAATGCATGGCCGGCTCGCACTCG TGAGCAATACCTCTCGCTCGTCGGAAGAGCTGGCTGTTTTACTGAGTGATAAAGGGATTTCAGAAACATTTATTGATGGA ATTTTCACGTCCGGAAGCCTGTGCAAAGAACGAATTACTCGCCATTTCGCAACCAATCCACAACACACTTTCATCCTAGT GGGCACCGCCGGTGAATGCCACTGGCTCACTACGATGTTAGATCGACAAGTCTCTTCTATCGAAGCATGTGATTTTGTTA TTGCTGCAAACATCATTTATGAAAAGGATGAAGAGGTCGAAAGGTTAGTAAGAAAAATCATAGAAAGAGGGTTGATCGTA TATTCAACGAATCCGGATAAATTTGTCAATATTGGAGGTCGTATTCATAAGGCTGCGGGGTACTTCTGTCAAAAAGTGAG AGAAGCCGGTGGTACCGTTTACGAGTATGGCAAACCTAATGTGGATATTTTTAATATCGCATTGGCAGGGATTGGTGTGA AAAAAGAAAATGCCTGCATGTTGGGGGATTCGCTAGAAACGGATATTTTTGGAGGAAACTCTGCATCACTTAAAACCATA CTGGTCGCTGGATGTGGTGGTTTGCAGTATAGCGAAGATGAATTAAATGAAGGGTTGCATGATTATATTCTAAATCTACA GGGGTGA
Upstream 100 bases:
>100_bases AAAAAACACTTCCCATACACGATATGTGCTGCTACATATTTAAGCATAATTTACATATAAATAAACGAGAATGATTTTCA ACTCCATGAATGGATGCATG
Downstream 100 bases:
>100_bases TTATGTATAAGGTGCTTATCATTGGTTCAGGTGTCCTTTCTACGATGGTTTCAGAGATGTTGGCCTGGAGAAATTTTCCG TGCCAGGTAACGATTGCTGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IIA Hydrolase Like Protein; HAD-Superfamily Subfamily IIA Hydrolase; HAD-Superfamily Hydrolase; HAD-Superfamily Hydrolase Subfamily IIA; HAD Superfamily Hydrolase; Had-Superfamily Subfamily IIa Hydrolase Like Protein; HAD Family Sugar Phosphatase; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Sugar Phosphatase Of HAD Superfamily; HAD-Superfamily Subfamily IIA Hydrolase TIGR; Sugar Phosphatase; Sugar Phosphatase/Hydrolase; Hydrolase IIA; HAD-Superfamily Subfamily IIA Hydrolase-Like Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRSSEELAVLLSDKGISETFIDG IFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTMLDRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIV YSTNPDKFVNIGGRIHKAAGYFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI LVAGCGGLQYSEDELNEGLHDYILNLQG
Sequences:
>Translated_268_residues MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRSSEELAVLLSDKGISETFIDG IFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTMLDRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIV YSTNPDKFVNIGGRIHKAAGYFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI LVAGCGGLQYSEDELNEGLHDYILNLQG >Mature_268_residues MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRSSEELAVLLSDKGISETFIDG IFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTMLDRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIV YSTNPDKFVNIGGRIHKAAGYFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI LVAGCGGLQYSEDELNEGLHDYILNLQG
Specific function: Unknown
COG id: COG0647
COG function: function code G; Predicted sugar phosphatases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29592; Mature: 29592
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRS CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC SEELAVLLSDKGISETFIDGIFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTML CCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH DRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIVYSTNPDKFVNIGGRIHKAAG HHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEECCCCHHHHHH YFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI HHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEE LVAGCGGLQYSEDELNEGLHDYILNLQG EEECCCCCCCCHHHHHCCHHHHHEECCC >Mature Secondary Structure MKRDKKCLACVDELPVFEGYLVDVWGVLYDGQSKTHIADDLLRKMKMHGRLALVSNTSRS CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCC SEELAVLLSDKGISETFIDGIFTSGSLCKERITRHFATNPQHTFILVGTAGECHWLTTML CCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH DRQVSSIEACDFVIAANIIYEKDEEVERLVRKIIERGLIVYSTNPDKFVNIGGRIHKAAG HHHHHHHHHHHHHEEHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCEEECCCCHHHHHH YFCQKVREAGGTVYEYGKPNVDIFNIALAGIGVKKENACMLGDSLETDIFGGNSASLKTI HHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCEEEE LVAGCGGLQYSEDELNEGLHDYILNLQG EEECCCCCCCCHHHHHCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA