| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372214
Identifier: 157372214
GI number: 157372214
Start: 4412620
End: 4414014
Strand: Reverse
Name: 157372214
Synonym: Spro_3980
Alternate gene names: NA
Gene position: 4414014-4412620 (Counterclockwise)
Preceding gene: 157372215
Following gene: 157372213
Centisome position: 81.01
GC content: 52.62
Gene sequence:
>1395_bases ATGCGATATTTTTCTGCTTATTCAGCGCTAACCATCGGCATGGCCGGTGGGTTGCCCCTCAGTACTTTTGCCGCACAGCC CAGCGGGCCGCAGGCCGACGTGCAATGCCATTACAGCCATACGCTGGCCGACGATGCCATTATGATGCCGGGCGAGGCCG GTATGGCGATGTGGCATGATTTCTTTGGCAACACGGCAACCGATGCCAATTCTACCTCCGATACTTTGTTGGCTAACCCG GAAACCACCTGTAATAACCTGGCCGACAATTCCGCGTACTGGGTGCCTGCACTGCGGTTGGAAGACGGTACGGTGGTGCG CCCGGCCTATCAGAAAACCTATTACCAGGCGAAAAACGTAGAGCAGTTCCCACTGCATTCATTTCCCCGCGGGTTGGAAT TGTTGGTGGGTGACCATCAAGGCACTAAACCCTCTCCTGGCGTGGTGAACTATTTTTGTCAGGGGCTGGGGTATTCTGCC GTGCCGTTTGAAAACTGTCCGCCGTATGCGCCAGGCAAACTGCAATTCAATATTGCTCTGGCATTCCCTAATTGCTGGGA TGGTAAAAACCTCAAGCCAGGCAAAACGTTGAAAAATGCGGTCTATGCGGTGAAGGATGCGTGCCCGGCGGCCTATCCGG TGAAACTGCCAACCATCAATATGAACGTCGCCTATGAGCTGGATAGTGATACGGCGGTAGATATCAGCAAGGCTCAGCTG TCGCTGGATCCGGTGATGGAAAACGGCAAAATGGTGGAGAAATGGGGGTCGATCTACACCGCACACGGTGATTTTATGAA TGGCTGGACTGAACAGGCTGCAACTTTCATGACCGACCAGTGCATGAATTTCCCTATGGATTGTGGCAAAAAAATACCTT ATAGCTATTCAGCCCCCCTGGCTGAGGCTACGGTTGCCGCTGATGGCAGCATAAATGAAAATCCTGCCGAGCTGTTGGTG CGGGGAGACAGCAAAAAACCGGGCCTCAGGAAAATTGCCTATCTCAAATTTGCGGTGCCTGAGTGGCCGGCAGACAAAGA TATTGATACCGATAAAGATCTGGTTTATCACCTGCGCACGGTTGCTGGCAACGTGACCGACGCCACTGCCGGCATGATCT ATTTTTATCAATGCAACAATGACTGGCAGCCGGAGAACCTGAGCTGGGGCGCCCGCCCGGCATGTTCTACCGACACCAAA ACGGCGCTGTATCTGGACCACAATCGCGAATACCGTTATAGCAACGTGGATGCGTGGTTGCGGCAGGCAGTGAAAAATCA GCAAACCGAGATCACTATTGCGGTGGAAGGTAATGACAGCGGTCGTCTGTTCAGTATTGATTCAGCCGAGAGCAAAACAC CGCCGTTGTTGATGTTAACGGGATATAGGAAATAA
Upstream 100 bases:
>100_bases CCCTATTATCGGTGTCGATGAAGGGCGGTCACACCTGAGAATTAACCTTCAAAAGGTCTCGACGTCGCCTTCTCGCTAAA ACGTAATAAGGAACATAACG
Downstream 100 bases:
>100_bases GCGCATTGTGTTGTCCGGCCCGCACTATTGTGTTGCGGGCTTTTTGTTCTTATCCGCTCAGTCTATTCCCACTCTGTTAA TCCGTGTATCAACCCCGTCC
Product: putative periplasmic or exported protein
Products: NA
Alternate protein names: Coagulation Factor 5/8 Type Domain-Containing Protein; Periplasmic Or Exported Protein
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MRYFSAYSALTIGMAGGLPLSTFAAQPSGPQADVQCHYSHTLADDAIMMPGEAGMAMWHDFFGNTATDANSTSDTLLANP ETTCNNLADNSAYWVPALRLEDGTVVRPAYQKTYYQAKNVEQFPLHSFPRGLELLVGDHQGTKPSPGVVNYFCQGLGYSA VPFENCPPYAPGKLQFNIALAFPNCWDGKNLKPGKTLKNAVYAVKDACPAAYPVKLPTINMNVAYELDSDTAVDISKAQL SLDPVMENGKMVEKWGSIYTAHGDFMNGWTEQAATFMTDQCMNFPMDCGKKIPYSYSAPLAEATVAADGSINENPAELLV RGDSKKPGLRKIAYLKFAVPEWPADKDIDTDKDLVYHLRTVAGNVTDATAGMIYFYQCNNDWQPENLSWGARPACSTDTK TALYLDHNREYRYSNVDAWLRQAVKNQQTEITIAVEGNDSGRLFSIDSAESKTPPLLMLTGYRK
Sequences:
>Translated_464_residues MRYFSAYSALTIGMAGGLPLSTFAAQPSGPQADVQCHYSHTLADDAIMMPGEAGMAMWHDFFGNTATDANSTSDTLLANP ETTCNNLADNSAYWVPALRLEDGTVVRPAYQKTYYQAKNVEQFPLHSFPRGLELLVGDHQGTKPSPGVVNYFCQGLGYSA VPFENCPPYAPGKLQFNIALAFPNCWDGKNLKPGKTLKNAVYAVKDACPAAYPVKLPTINMNVAYELDSDTAVDISKAQL SLDPVMENGKMVEKWGSIYTAHGDFMNGWTEQAATFMTDQCMNFPMDCGKKIPYSYSAPLAEATVAADGSINENPAELLV RGDSKKPGLRKIAYLKFAVPEWPADKDIDTDKDLVYHLRTVAGNVTDATAGMIYFYQCNNDWQPENLSWGARPACSTDTK TALYLDHNREYRYSNVDAWLRQAVKNQQTEITIAVEGNDSGRLFSIDSAESKTPPLLMLTGYRK >Mature_464_residues MRYFSAYSALTIGMAGGLPLSTFAAQPSGPQADVQCHYSHTLADDAIMMPGEAGMAMWHDFFGNTATDANSTSDTLLANP ETTCNNLADNSAYWVPALRLEDGTVVRPAYQKTYYQAKNVEQFPLHSFPRGLELLVGDHQGTKPSPGVVNYFCQGLGYSA VPFENCPPYAPGKLQFNIALAFPNCWDGKNLKPGKTLKNAVYAVKDACPAAYPVKLPTINMNVAYELDSDTAVDISKAQL SLDPVMENGKMVEKWGSIYTAHGDFMNGWTEQAATFMTDQCMNFPMDCGKKIPYSYSAPLAEATVAADGSINENPAELLV RGDSKKPGLRKIAYLKFAVPEWPADKDIDTDKDLVYHLRTVAGNVTDATAGMIYFYQCNNDWQPENLSWGARPACSTDTK TALYLDHNREYRYSNVDAWLRQAVKNQQTEITIAVEGNDSGRLFSIDSAESKTPPLLMLTGYRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51026; Mature: 51026
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYFSAYSALTIGMAGGLPLSTFAAQPSGPQADVQCHYSHTLADDAIMMPGEAGMAMWHD CCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCHHHHHH FFGNTATDANSTSDTLLANPETTCNNLADNSAYWVPALRLEDGTVVRPAYQKTYYQAKNV HHCCCCCCCCCCCCEEEECCCHHHHHCCCCCEEEEEEEEECCCCEECCHHHHHHHHHCCC EQFPLHSFPRGLELLVGDHQGTKPSPGVVNYFCQGLGYSAVPFENCPPYAPGKLQFNIAL CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE AFPNCWDGKNLKPGKTLKNAVYAVKDACPAAYPVKLPTINMNVAYELDSDTAVDISKAQL ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCEEEEEHHEE SLDPVMENGKMVEKWGSIYTAHGDFMNGWTEQAATFMTDQCMNFPMDCGKKIPYSYSAPL EECHHHCCCEEEECCCCEEEECCCHHCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCC AEATVAADGSINENPAELLVRGDSKKPGLRKIAYLKFAVPEWPADKDIDTDKDLVYHLRT CCEEEECCCCCCCCHHHEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH VAGNVTDATAGMIYFYQCNNDWQPENLSWGARPACSTDTKTALYLDHNREYRYSNVDAWL HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCHHHHH RQAVKNQQTEITIAVEGNDSGRLFSIDSAESKTPPLLMLTGYRK HHHHCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCC >Mature Secondary Structure MRYFSAYSALTIGMAGGLPLSTFAAQPSGPQADVQCHYSHTLADDAIMMPGEAGMAMWHD CCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCEECCCCCCHHHHHH FFGNTATDANSTSDTLLANPETTCNNLADNSAYWVPALRLEDGTVVRPAYQKTYYQAKNV HHCCCCCCCCCCCCEEEECCCHHHHHCCCCCEEEEEEEEECCCCEECCHHHHHHHHHCCC EQFPLHSFPRGLELLVGDHQGTKPSPGVVNYFCQGLGYSAVPFENCPPYAPGKLQFNIAL CCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE AFPNCWDGKNLKPGKTLKNAVYAVKDACPAAYPVKLPTINMNVAYELDSDTAVDISKAQL ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEECCCCEEEEEHHEE SLDPVMENGKMVEKWGSIYTAHGDFMNGWTEQAATFMTDQCMNFPMDCGKKIPYSYSAPL EECHHHCCCEEEECCCCEEEECCCHHCCHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCC AEATVAADGSINENPAELLVRGDSKKPGLRKIAYLKFAVPEWPADKDIDTDKDLVYHLRT CCEEEECCCCCCCCHHHEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH VAGNVTDATAGMIYFYQCNNDWQPENLSWGARPACSTDTKTALYLDHNREYRYSNVDAWL HHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCHHHHH RQAVKNQQTEITIAVEGNDSGRLFSIDSAESKTPPLLMLTGYRK HHHHCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA