| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is yeaN [H]
Identifier: 157372085
GI number: 157372085
Start: 4260486
End: 4261706
Strand: Direct
Name: yeaN [H]
Synonym: Spro_3850
Alternate gene names: 157372085
Gene position: 4260486-4261706 (Clockwise)
Preceding gene: 157372078
Following gene: 157372088
Centisome position: 78.19
GC content: 60.93
Gene sequence:
>1221_bases ATGCCCCAATCTGTCTTACCCCCAACGTCTGCTCCCCTAAAACGCAGCCGTTTACGCCACCCATTATTACTGGTCACCGG CATTATGCTGGTCGCGGCCAACCTGCGCGCCGCGCTCACCAGCGTCGGACCGTTACTGGAACAGATCCAGCAACAGTTGT TGCTGTCCGCCACCGCGGCCGGCCTGCTTAATTCATTGCCGTTGATCCTGTTTGCCGTGCTGTCACCAGTGACTCCTGGC CTGGCCAAACGCCTGGGGATTGAACGCACGCTGGGTATGGCACTGTTGTTGCTGGTTTTCGGCATCGCACTGCGTTCCCT GCCGCAACCCGGCATGTTATGGCTGGGCACTATCCTGATCGGCGCTGCCATCGCATTTGCCAACGTGGTCCTGCCGACGC TGGTGAAACGCGACTTTCCAGGCCGTGCCGCCGCCATGATTGCCGGTTACGCGGCGGTGATGTCACTGGTGGCCGCAACC GCTTCGGGTCTGGCGGTGCCGCTGGCGGGGTTGAATGGTCTCGGTTGGCGTTTTTCCCTGCTGTGCTGGAGCCTACCTGC GTTGCTGGCGCTGATTGTCTGGCTGCCGCAGCTGCGCCGTCCAGCAACTTCGGTGACTGCCGATGCCCCGGCGGTTCAGC CGGCGCCGCCCCGCTCCCCCTGGGGCAGTGCGCTCGGATGGCAAGTGGCGCTGTTTATGGGCCTGCAGTCCATCACCTTC TATACCATTATCGGCTGGTTTAGCGCCTTCGCCGCCAGCCATGGCACCTCGCCGCAGCAGGCGGGGTTTGAGCTGTTTAT CTATCAGGTGGTGGCAATCGCCGCCAACTTTGTGATGGTGTTTATTCTGCCGCGCGCACGCGATCAGCGGGCTATTGCGC TGTGCAGTTCACTGCTGATTTTTATCGGCGTCGCCGGGCTGCTGCTGCTGCCAACCTATTCTCTGATTTGGTTGATTTTT GCCGGTCTGGGGGCGGGAAGTTCTTTGGTACTGGCGCTGTCGTTCTTTGGCCTGCGCAGCAGCCATCATCACCAGGCCAC GCAACTGTCAGGCATGGCGCAATCGGTAGGCTATTTACTGGCCGCGCTGGGGCCGACGCTGTTCGGTCTGTTACATGACC TGACTCAGGGCTGGCAGTTGCCGCTGAGCATTCTGCTGGGCCTGACGCTGCTGCAGATGCTGTTCGGCATATTGGCCGGG CGCAATAGGGTTATTCGTTAA
Upstream 100 bases:
>100_bases CGCGCAGACATTGGCCGCTGCCGATGCGTAAGCGTTAACGTCAATCAACGCATCATGCCATGCAGTATTGATTGACTGCC TGCCCTGGTGCGAGGAACTA
Downstream 100 bases:
>100_bases CGCCGGGCCGGGTGGCCGGTTTCGGTACGGGTTCCGTGGCATCGTCCTGCCAGAGATCGTTGATAAAATCCCGTTGTTGT TGGGTCAACTGCCATAAAGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MPQSVLPPTSAPLKRSRLRHPLLLVTGIMLVAANLRAALTSVGPLLEQIQQQLLLSATAAGLLNSLPLILFAVLSPVTPG LAKRLGIERTLGMALLLLVFGIALRSLPQPGMLWLGTILIGAAIAFANVVLPTLVKRDFPGRAAAMIAGYAAVMSLVAAT ASGLAVPLAGLNGLGWRFSLLCWSLPALLALIVWLPQLRRPATSVTADAPAVQPAPPRSPWGSALGWQVALFMGLQSITF YTIIGWFSAFAASHGTSPQQAGFELFIYQVVAIAANFVMVFILPRARDQRAIALCSSLLIFIGVAGLLLLPTYSLIWLIF AGLGAGSSLVLALSFFGLRSSHHHQATQLSGMAQSVGYLLAALGPTLFGLLHDLTQGWQLPLSILLGLTLLQMLFGILAG RNRVIR
Sequences:
>Translated_406_residues MPQSVLPPTSAPLKRSRLRHPLLLVTGIMLVAANLRAALTSVGPLLEQIQQQLLLSATAAGLLNSLPLILFAVLSPVTPG LAKRLGIERTLGMALLLLVFGIALRSLPQPGMLWLGTILIGAAIAFANVVLPTLVKRDFPGRAAAMIAGYAAVMSLVAAT ASGLAVPLAGLNGLGWRFSLLCWSLPALLALIVWLPQLRRPATSVTADAPAVQPAPPRSPWGSALGWQVALFMGLQSITF YTIIGWFSAFAASHGTSPQQAGFELFIYQVVAIAANFVMVFILPRARDQRAIALCSSLLIFIGVAGLLLLPTYSLIWLIF AGLGAGSSLVLALSFFGLRSSHHHQATQLSGMAQSVGYLLAALGPTLFGLLHDLTQGWQLPLSILLGLTLLQMLFGILAG RNRVIR >Mature_405_residues PQSVLPPTSAPLKRSRLRHPLLLVTGIMLVAANLRAALTSVGPLLEQIQQQLLLSATAAGLLNSLPLILFAVLSPVTPGL AKRLGIERTLGMALLLLVFGIALRSLPQPGMLWLGTILIGAAIAFANVVLPTLVKRDFPGRAAAMIAGYAAVMSLVAATA SGLAVPLAGLNGLGWRFSLLCWSLPALLALIVWLPQLRRPATSVTADAPAVQPAPPRSPWGSALGWQVALFMGLQSITFY TIIGWFSAFAASHGTSPQQAGFELFIYQVVAIAANFVMVFILPRARDQRAIALCSSLLIFIGVAGLLLLPTYSLIWLIFA GLGAGSSLVLALSFFGLRSSHHHQATQLSGMAQSVGYLLAALGPTLFGLLHDLTQGWQLPLSILLGLTLLQMLFGILAGR NRVIR
Specific function: Unknown
COG id: COG2807
COG function: function code P; Cyanate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]
Homologues:
Organism=Escherichia coli, GI1788092, Length=388, Percent_Identity=43.298969072165, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI1786536, Length=376, Percent_Identity=26.8617021276596, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004747 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42956; Mature: 42825
Theoretical pI: Translated: 12.05; Mature: 12.05
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSVLPPTSAPLKRSRLRHPLLLVTGIMLVAANLRAALTSVGPLLEQIQQQLLLSATAA CCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLNSLPLILFAVLSPVTPGLAKRLGIERTLGMALLLLVFGIALRSLPQPGMLWLGTILI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GAAIAFANVVLPTLVKRDFPGRAAAMIAGYAAVMSLVAATASGLAVPLAGLNGLGWRFSL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCCCHHHHH LCWSLPALLALIVWLPQLRRPATSVTADAPAVQPAPPRSPWGSALGWQVALFMGLQSITF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YTIIGWFSAFAASHGTSPQQAGFELFIYQVVAIAANFVMVFILPRARDQRAIALCSSLLI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FIGVAGLLLLPTYSLIWLIFAGLGAGSSLVLALSFFGLRSSHHHQATQLSGMAQSVGYLL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AALGPTLFGLLHDLTQGWQLPLSILLGLTLLQMLFGILAGRNRVIR HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PQSVLPPTSAPLKRSRLRHPLLLVTGIMLVAANLRAALTSVGPLLEQIQQQLLLSATAA CCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLNSLPLILFAVLSPVTPGLAKRLGIERTLGMALLLLVFGIALRSLPQPGMLWLGTILI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GAAIAFANVVLPTLVKRDFPGRAAAMIAGYAAVMSLVAATASGLAVPLAGLNGLGWRFSL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEHHCCCCCCCHHHHH LCWSLPALLALIVWLPQLRRPATSVTADAPAVQPAPPRSPWGSALGWQVALFMGLQSITF HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YTIIGWFSAFAASHGTSPQQAGFELFIYQVVAIAANFVMVFILPRARDQRAIALCSSLLI HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH FIGVAGLLLLPTYSLIWLIFAGLGAGSSLVLALSFFGLRSSHHHQATQLSGMAQSVGYLL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AALGPTLFGLLHDLTQGWQLPLSILLGLTLLQMLFGILAGRNRVIR HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]