| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is map [H]
Identifier: 157372026
GI number: 157372026
Start: 4191046
End: 4191840
Strand: Direct
Name: map [H]
Synonym: Spro_3791
Alternate gene names: 157372026
Gene position: 4191046-4191840 (Clockwise)
Preceding gene: 157372007
Following gene: 157372027
Centisome position: 76.92
GC content: 54.72
Gene sequence:
>795_bases ATGGCAATCTCAATTAAAACACCTGATGACATCCAAAAAATGCGCGTGGCCGGCCGACTGGCTGCCGAAGTGCTGGAAAT CATTGAGCCGCACGTCAAACCTGGCGTGACCACCGGCGAACTCGATCGTATCTGTCACGATCACATCACCAACCAGCAGC AGGCGATCTCTGCCTGTCTGGGCTACCACGGTTTCCCGAAATCCGTGTGTATCTCGGTGAATGAAGTGGTCTGCCACGGC ATCCCGAGCGATGACAAGGTCCTGAAAGACGGCGACATCGTTAATATCGACGTTACCGTCATCAAAGACGGTTTCCACGG TGATACTTCTAAAATGTTCATCGCCGGTAAACCGACCATTCTGGGCGAGCGCCTGTGCCGCATCACTCAGGAAAGCCTGT ATCTGTCGCTGAAAATGGTGAAGCCGGGTATCCGCCTGCGCACGCTGGGCAAAGAGATCCAGAAATTCGTCGAGGCCGAG AATTTCTCGGTGGTTCGCGAGTACTGCGGCCACGGCATTGGCGAGGTGTTCCACGAGGAACCACAGGTGCTGCACTATGA CGCTGACGACGGCGGCGTGGTGCTGCAGGCTGGTATGGCCTTCACCATCGAGCCGATGGTCAATGCCGGTGATTACCGCA TTCGCACCATGAAAGACGGCTGGACGGTAAAAACCAAAGATCGCAGCTTGTCGGCGCAGTATGAGCATACTATTGTGGTC ACGGATAACGGCTGCGAGATAATGACGTTGCGCAAGGATGACACCATCCCCAACATCATTACGCACGAGATGTAA
Upstream 100 bases:
>100_bases AGAAATCAAATTTGGCAGCCTCAGGCCGGGCTGATACCATAAGAGACTGCTTCTTATTTCTTTCTGTTGTCGGCGAGCAC GACACCTGCGGACGAATTTC
Downstream 100 bases:
>100_bases GCACCGCGGCGTTTTGCCGCGATGCATGATGTCACAGGCCGGCTTTTGCCGGCCTTTTTTATGGGCTGCGTATTATGTCT GAAAACTTTCGCCAACAAGA
Product: methionine aminopeptidase
Products: NA
Alternate protein names: MAP; Peptidase M [H]
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAISIKTPDDIQKMRVAGRLAAEVLEIIEPHVKPGVTTGELDRICHDHITNQQQAISACLGYHGFPKSVCISVNEVVCHG IPSDDKVLKDGDIVNIDVTVIKDGFHGDTSKMFIAGKPTILGERLCRITQESLYLSLKMVKPGIRLRTLGKEIQKFVEAE NFSVVREYCGHGIGEVFHEEPQVLHYDADDGGVVLQAGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEIMTLRKDDTIPNIITHEM
Sequences:
>Translated_264_residues MAISIKTPDDIQKMRVAGRLAAEVLEIIEPHVKPGVTTGELDRICHDHITNQQQAISACLGYHGFPKSVCISVNEVVCHG IPSDDKVLKDGDIVNIDVTVIKDGFHGDTSKMFIAGKPTILGERLCRITQESLYLSLKMVKPGIRLRTLGKEIQKFVEAE NFSVVREYCGHGIGEVFHEEPQVLHYDADDGGVVLQAGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV TDNGCEIMTLRKDDTIPNIITHEM >Mature_263_residues AISIKTPDDIQKMRVAGRLAAEVLEIIEPHVKPGVTTGELDRICHDHITNQQQAISACLGYHGFPKSVCISVNEVVCHGI PSDDKVLKDGDIVNIDVTVIKDGFHGDTSKMFIAGKPTILGERLCRITQESLYLSLKMVKPGIRLRTLGKEIQKFVEAEN FSVVREYCGHGIGEVFHEEPQVLHYDADDGGVVLQAGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVVT DNGCEIMTLRKDDTIPNIITHEM
Specific function: Removes the amino-terminal methionine from nascent proteins [H]
COG id: COG0024
COG function: function code J; Methionine aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24A family [H]
Homologues:
Organism=Homo sapiens, GI164420681, Length=260, Percent_Identity=45.7692307692308, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI40385867, Length=248, Percent_Identity=39.9193548387097, Blast_Score=194, Evalue=5e-50, Organism=Escherichia coli, GI1786364, Length=263, Percent_Identity=83.6501901140685, Blast_Score=464, Evalue=1e-132, Organism=Caenorhabditis elegans, GI71996291, Length=250, Percent_Identity=45.2, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6323273, Length=251, Percent_Identity=47.0119521912351, Blast_Score=228, Evalue=5e-61, Organism=Drosophila melanogaster, GI21355531, Length=247, Percent_Identity=45.3441295546559, Blast_Score=224, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583427, Length=245, Percent_Identity=41.2244897959184, Blast_Score=197, Evalue=5e-51,
Paralogues:
None
Copy number: 3,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR002467 [H]
Pfam domain/function: PF00557 Peptidase_M24 [H]
EC number: =3.4.11.18 [H]
Molecular weight: Translated: 29316; Mature: 29185
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00680 MAP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISIKTPDDIQKMRVAGRLAAEVLEIIEPHVKPGVTTGELDRICHDHITNQQQAISACL CEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH GYHGFPKSVCISVNEVVCHGIPSDDKVLKDGDIVNIDVTVIKDGFHGDTSKMFIAGKPTI CCCCCCHHHEEEECHHEECCCCCCCCEECCCCEEEEEEEEEECCCCCCCCEEEEECCCCH LGERLCRITQESLYLSLKMVKPGIRLRTLGKEIQKFVEAENFSVVREYCGHGIGEVFHEE HHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCC PQVLHYDADDGGVVLQAGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV CCEEEEECCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE TDNGCEIMTLRKDDTIPNIITHEM ECCCCEEEEEECCCCCCCHHCCCC >Mature Secondary Structure AISIKTPDDIQKMRVAGRLAAEVLEIIEPHVKPGVTTGELDRICHDHITNQQQAISACL EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH GYHGFPKSVCISVNEVVCHGIPSDDKVLKDGDIVNIDVTVIKDGFHGDTSKMFIAGKPTI CCCCCCHHHEEEECHHEECCCCCCCCEECCCCEEEEEEEEEECCCCCCCCEEEEECCCCH LGERLCRITQESLYLSLKMVKPGIRLRTLGKEIQKFVEAENFSVVREYCGHGIGEVFHEE HHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCC PQVLHYDADDGGVVLQAGMAFTIEPMVNAGDYRIRTMKDGWTVKTKDRSLSAQYEHTIVV CCEEEEECCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEE TDNGCEIMTLRKDDTIPNIITHEM ECCCCEEEEEECCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]