Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

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The map label for this gene is glnD

Identifier: 157372027

GI number: 157372027

Start: 4191915

End: 4194593

Strand: Direct

Name: glnD

Synonym: Spro_3792

Alternate gene names: 157372027

Gene position: 4191915-4194593 (Clockwise)

Preceding gene: 157372026

Following gene: 157372028

Centisome position: 76.93

GC content: 59.43

Gene sequence:

>2679_bases
ATGTCTGAAAACTTTCGCCAACAAGACACCTCGGTCATTTCGCCACAGGCCGTACCGGTGCAGCCTGAATATCCCAACGC
CTATGGCGATGAGGAGATTAACTGCATCGCGCTGAAACAACGCCTGGAGCAGTTCCAATTATGGCTGGCGGCAGCGTTCA
ACGCCGGTTCCAGCGCCGAAAGCCTGGTAGCGGCCCGCAGCGACTTTATCGACCGCCTGCTGCGCCGTCTGTGGGTCTTC
TACGGGTTCGAGGATATTCCGGAAACCGCGCTGGTTGCCGTTGGCGGCTATGGCCGTGGCGAGCTGCACCCGCTCTCGGA
CATTGACGTGCTGGTGCTCAGCCAGCGCCGCCTGAATGAGCAGCAATCCCAACGCGTGGGGGAATTTATCACCCTGCTGT
GGGATCTGAAGCTGGAAGTCGGCCACAGTGTGCGAACCCTGGAAGAATGCCTGCTGGAAGGGCTGGCGGACCTGACCGTC
GCCACCAACCTGATTGAATCGCGGATGATCTGCGGCGATGTCGCACTGTTTCTGCAAATGCAAAAACATATCTTCAGCGA
TGGTTTCTGGCCCTCCCCGCAATTTTTCCACGCCAAGGTGGTTGAGCAGCAGGAACGCCATCAGCGATACCACGGTACCA
GCTACAACCTGGAACCGGATATCAAGAGCAGCCCCGGTGGCCTGCGCGATATTCACACCTTGCTGTGGGTGGCGCGTCGT
CACTTTGGCGCTACATCACTGGACGAAATGGTCGGCTTCGGCTTTCTCACTCAGGCCGAGCGCAACGAGCTGAACGAATG
CCAGAGCTTCCTGTGGCGCATCCGCTTCGCACTGCACCTGGTGCTGCCGCGCTACGACAACCGTTTACTGTTCGATCGCC
AGCTCAACGTGGCACAGTTACTGCGTTATGAGGGGGAAGGCAACGAACCGGTTGAACGCATGATGAAGGATTTTTATCGC
ATGACGCGCCGCGTCGGCGAACTGAATCATATGCTGCTGCAGCTGTTCGACGAGGCAATTCTGGCGCTGGACGCGACGGA
AAAACCACGTCCGCTGAACGACGATTTCCAACTGCGTGGCGATCTGATCGACCTGCGTGATGAAACGCTGTTTATCCGCC
AGCCGGAATCCATCATGCGGATGTTCTACCTGATGGTACGCAACCGCGAGATCAAAGGCATTTATTCCACCACAGTACGC
CAGCTGCGTCATGCGCGCCGCCATTTGAAGCAGCCGCTCTGCACCATTCCTGAGGCACGCGAACTGTTTATGGCCATTCT
GCGCCACCCCGGCGCGGTCTCCCGGGCGTTGGTGCCGATGCACCGCCACAGCGTGCTGTGGGCCTATATGCCACAGTGGG
GCAAAATCGTCGGGCAAATGCAGTTCGATCTGTTCCACGCCTACACCGTCGACGAACACACCATTCGCGTCCTGCAAAAA
CTGGAAAGCTTTGCCGATGCCGAAACGCGACCGCGCCATCCGCTGTGTGTCGAGCTGTATCCACGCCTGCCGAATCCGGA
ACTGCTACTGCTGGCCGCCCTGTTCCACGATATCGCCAAAGGGCGCGGCGGCGACCATTCGATCCTCGGTGCGCAGGACG
TGCTGGAGTTCGCCGAAGTCCATGGGCTGAATTCCCGCGAGGCCCAACTGGTCGCCTGGCTGGTGCGTTGTCATCTGCTG
ATGTCGGTGACCGCCCAACGCCGCGACATTCAGGATCCGACCGTTATTCAGCAGTTCAGCGCCGAAGTGCAGAGCGAAAC
CCGTCTGCGTTATCTGGTCTGCCTGACGGTGGCGGATATCTGCGCCACCAACGAAACCCTGTGGAACAGTTGGAAACAGA
GCCTGTTGCGCGAGCTGTATTTTGCCACCGAAAAACAGCTGCGCCGCGGCATGCAAAACAGCCCGGACCTGCGCGAACGC
GTACGTCATCATCGCCTGCAGGCTTTGGCGTTGCTGCGCATGGACAATATCGACGAGGAGGCGCTGCACCGCATCTGGAG
CCGCTGTCGCGCCGATTACTTCCTGCGTCATTCACCCAACCAGTTGGCCTGGCATGCGCGCCATTTGCTGGCCCATGACT
CCACCAAACCGCTGGTGCTGGTCAGCCGGCAGGCCACGCGCGGCGGCACCGAAATTTTCATCTGGAGCCCTGACCGCCCT
TACCTGTTTGCCGCCGTGGCCGGGGAGATGGATCGCCGTAACCTGAGCGTACATGACGCGCAGATCTTCACTAATCGTGA
CGGCATGGCAATGGATACCTTTATCGTACTGGAGCCGGACGGCAGCCCGCTGGCCCAGGACCGCCACACGGCGATCCGCC
ACGCACTATTGCAGGCCATTACCCAGCGGGAATATCAGCCGCCGCGCGTGCGCAGGCCGTCTTCCAAGCTGCGTCATTTT
AGCGTGCCGACCGAAGTCAGTTTCCTGCCGACCCATACCGACCGTCGCAGCTATCTGGAACTGACCGCACTCGACCAGCC
AGGTCTGTTGGCTCGGGTGGGCGAAGTGTTCGCCGATCTCAACCTGTCGCTGCACGGCGCACGCATCTCCACTATCGGCG
AACGGGTTGAGGATTTATTTATTCTGGCCGACAGCGATCGACGCGCCCTTAACCCGGAAACGCGCAGAAAGTTGGAACAA
CGGTTGACAGAGGCCCTCAATCCAAACGATAAAATGTGA

Upstream 100 bases:

>100_bases
CCAACATCATTACGCACGAGATGTAAGCACCGCGGCGTTTTGCCGCGATGCATGATGTCACAGGCCGGCTTTTGCCGGCC
TTTTTTATGGGCTGCGTATT

Downstream 100 bases:

>100_bases
TACAAGTAACCTTTTCGTAGACAACATCAGGACAGAGAACAGCATGCAGCAATTACAAAACGTTATTGAAAACGCCTTCG
AACGCCGTGCGGAAATCACC

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme

Number of amino acids: Translated: 892; Mature: 891

Protein sequence:

>892_residues
MSENFRQQDTSVISPQAVPVQPEYPNAYGDEEINCIALKQRLEQFQLWLAAAFNAGSSAESLVAARSDFIDRLLRRLWVF
YGFEDIPETALVAVGGYGRGELHPLSDIDVLVLSQRRLNEQQSQRVGEFITLLWDLKLEVGHSVRTLEECLLEGLADLTV
ATNLIESRMICGDVALFLQMQKHIFSDGFWPSPQFFHAKVVEQQERHQRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HFGATSLDEMVGFGFLTQAERNELNECQSFLWRIRFALHLVLPRYDNRLLFDRQLNVAQLLRYEGEGNEPVERMMKDFYR
MTRRVGELNHMLLQLFDEAILALDATEKPRPLNDDFQLRGDLIDLRDETLFIRQPESIMRMFYLMVRNREIKGIYSTTVR
QLRHARRHLKQPLCTIPEARELFMAILRHPGAVSRALVPMHRHSVLWAYMPQWGKIVGQMQFDLFHAYTVDEHTIRVLQK
LESFADAETRPRHPLCVELYPRLPNPELLLLAALFHDIAKGRGGDHSILGAQDVLEFAEVHGLNSREAQLVAWLVRCHLL
MSVTAQRRDIQDPTVIQQFSAEVQSETRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRER
VRHHRLQALALLRMDNIDEEALHRIWSRCRADYFLRHSPNQLAWHARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP
YLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALLQAITQREYQPPRVRRPSSKLRHF
SVPTEVSFLPTHTDRRSYLELTALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSDRRALNPETRRKLEQ
RLTEALNPNDKM

Sequences:

>Translated_892_residues
MSENFRQQDTSVISPQAVPVQPEYPNAYGDEEINCIALKQRLEQFQLWLAAAFNAGSSAESLVAARSDFIDRLLRRLWVF
YGFEDIPETALVAVGGYGRGELHPLSDIDVLVLSQRRLNEQQSQRVGEFITLLWDLKLEVGHSVRTLEECLLEGLADLTV
ATNLIESRMICGDVALFLQMQKHIFSDGFWPSPQFFHAKVVEQQERHQRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HFGATSLDEMVGFGFLTQAERNELNECQSFLWRIRFALHLVLPRYDNRLLFDRQLNVAQLLRYEGEGNEPVERMMKDFYR
MTRRVGELNHMLLQLFDEAILALDATEKPRPLNDDFQLRGDLIDLRDETLFIRQPESIMRMFYLMVRNREIKGIYSTTVR
QLRHARRHLKQPLCTIPEARELFMAILRHPGAVSRALVPMHRHSVLWAYMPQWGKIVGQMQFDLFHAYTVDEHTIRVLQK
LESFADAETRPRHPLCVELYPRLPNPELLLLAALFHDIAKGRGGDHSILGAQDVLEFAEVHGLNSREAQLVAWLVRCHLL
MSVTAQRRDIQDPTVIQQFSAEVQSETRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRER
VRHHRLQALALLRMDNIDEEALHRIWSRCRADYFLRHSPNQLAWHARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP
YLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALLQAITQREYQPPRVRRPSSKLRHF
SVPTEVSFLPTHTDRRSYLELTALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSDRRALNPETRRKLEQ
RLTEALNPNDKM
>Mature_891_residues
SENFRQQDTSVISPQAVPVQPEYPNAYGDEEINCIALKQRLEQFQLWLAAAFNAGSSAESLVAARSDFIDRLLRRLWVFY
GFEDIPETALVAVGGYGRGELHPLSDIDVLVLSQRRLNEQQSQRVGEFITLLWDLKLEVGHSVRTLEECLLEGLADLTVA
TNLIESRMICGDVALFLQMQKHIFSDGFWPSPQFFHAKVVEQQERHQRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARRH
FGATSLDEMVGFGFLTQAERNELNECQSFLWRIRFALHLVLPRYDNRLLFDRQLNVAQLLRYEGEGNEPVERMMKDFYRM
TRRVGELNHMLLQLFDEAILALDATEKPRPLNDDFQLRGDLIDLRDETLFIRQPESIMRMFYLMVRNREIKGIYSTTVRQ
LRHARRHLKQPLCTIPEARELFMAILRHPGAVSRALVPMHRHSVLWAYMPQWGKIVGQMQFDLFHAYTVDEHTIRVLQKL
ESFADAETRPRHPLCVELYPRLPNPELLLLAALFHDIAKGRGGDHSILGAQDVLEFAEVHGLNSREAQLVAWLVRCHLLM
SVTAQRRDIQDPTVIQQFSAEVQSETRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRERV
RHHRLQALALLRMDNIDEEALHRIWSRCRADYFLRHSPNQLAWHARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRPY
LFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALLQAITQREYQPPRVRRPSSKLRHFS
VPTEVSFLPTHTDRRSYLELTALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSDRRALNPETRRKLEQR
LTEALNPNDKM

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family

Homologues:

Organism=Escherichia coli, GI1786363, Length=875, Percent_Identity=77.9428571428572, Blast_Score=1432, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLND_SERP5 (A8GIE8)

Other databases:

- EMBL:   CP000826
- RefSeq:   YP_001480016.1
- ProteinModelPortal:   A8GIE8
- STRING:   A8GIE8
- GeneID:   5607191
- GenomeReviews:   CP000826_GR
- KEGG:   spe:Spro_3792
- eggNOG:   COG2844
- HOGENOM:   HBG687872
- OMA:   MQHDLFH
- ProtClustDB:   PRK05007
- BioCyc:   SPRO399741:SPRO_3792-MONOMER
- HAMAP:   MF_00277
- InterPro:   IPR002912
- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546
- PANTHER:   PTHR13734:SF1
- PIRSF:   PIRSF006288
- SMART:   SM00471
- TIGRFAMs:   TIGR01693

Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2

EC number: =2.7.7.59

Molecular weight: Translated: 103202; Mature: 103070

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENFRQQDTSVISPQAVPVQPEYPNAYGDEEINCIALKQRLEQFQLWLAAAFNAGSSAE
CCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
SLVAARSDFIDRLLRRLWVFYGFEDIPETALVAVGGYGRGELHPLSDIDVLVLSQRRLNE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCH
QQSQRVGEFITLLWDLKLEVGHSVRTLEECLLEGLADLTVATNLIESRMICGDVALFLQM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKHIFSDGFWPSPQFFHAKVVEQQERHQRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
HFGATSLDEMVGFGFLTQAERNELNECQSFLWRIRFALHLVLPRYDNRLLFDRQLNVAQL
HCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
LRYEGEGNEPVERMMKDFYRMTRRVGELNHMLLQLFDEAILALDATEKPRPLNDDFQLRG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC
DLIDLRDETLFIRQPESIMRMFYLMVRNREIKGIYSTTVRQLRHARRHLKQPLCTIPEAR
CEEECCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ELFMAILRHPGAVSRALVPMHRHSVLWAYMPQWGKIVGQMQFDLFHAYTVDEHTIRVLQK
HHHHHHHHCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHEEECCHHHHHHHHH
LESFADAETRPRHPLCVELYPRLPNPELLLLAALFHDIAKGRGGDHSILGAQDVLEFAEV
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HGLNSREAQLVAWLVRCHLLMSVTAQRRDIQDPTVIQQFSAEVQSETRLRYLVCLTVADI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CATNETLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRERVRHHRLQALALLRMDNIDEE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
ALHRIWSRCRADYFLRHSPNQLAWHARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCC
YLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALLQAI
EEEEEECCCCCCCCCCEEHHEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
TQREYQPPRVRRPSSKLRHFSVPTEVSFLPTHTDRRSYLELTALDQPGLLARVGEVFADL
HHCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHC
NLSLHGARISTIGERVEDLFILADSDRRALNPETRRKLEQRLTEALNPNDKM
CCEECCCHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SENFRQQDTSVISPQAVPVQPEYPNAYGDEEINCIALKQRLEQFQLWLAAAFNAGSSAE
CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
SLVAARSDFIDRLLRRLWVFYGFEDIPETALVAVGGYGRGELHPLSDIDVLVLSQRRLNE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCH
QQSQRVGEFITLLWDLKLEVGHSVRTLEECLLEGLADLTVATNLIESRMICGDVALFLQM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKHIFSDGFWPSPQFFHAKVVEQQERHQRYHGTSYNLEPDIKSSPGGLRDIHTLLWVARR
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
HFGATSLDEMVGFGFLTQAERNELNECQSFLWRIRFALHLVLPRYDNRLLFDRQLNVAQL
HCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
LRYEGEGNEPVERMMKDFYRMTRRVGELNHMLLQLFDEAILALDATEKPRPLNDDFQLRG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC
DLIDLRDETLFIRQPESIMRMFYLMVRNREIKGIYSTTVRQLRHARRHLKQPLCTIPEAR
CEEECCCCEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
ELFMAILRHPGAVSRALVPMHRHSVLWAYMPQWGKIVGQMQFDLFHAYTVDEHTIRVLQK
HHHHHHHHCCCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHEEECCHHHHHHHHH
LESFADAETRPRHPLCVELYPRLPNPELLLLAALFHDIAKGRGGDHSILGAQDVLEFAEV
HHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HGLNSREAQLVAWLVRCHLLMSVTAQRRDIQDPTVIQQFSAEVQSETRLRYLVCLTVADI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CATNETLWNSWKQSLLRELYFATEKQLRRGMQNSPDLRERVRHHRLQALALLRMDNIDEE
HHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
ALHRIWSRCRADYFLRHSPNQLAWHARHLLAHDSTKPLVLVSRQATRGGTEIFIWSPDRP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEECCCCC
YLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQDRHTAIRHALLQAI
EEEEEECCCCCCCCCCEEHHEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
TQREYQPPRVRRPSSKLRHFSVPTEVSFLPTHTDRRSYLELTALDQPGLLARVGEVFADL
HHCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHC
NLSLHGARISTIGERVEDLFILADSDRRALNPETRRKLEQRLTEALNPNDKM
CCEECCCHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA