| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is metQ [H]
Identifier: 157371990
GI number: 157371990
Start: 4151953
End: 4152768
Strand: Direct
Name: metQ [H]
Synonym: Spro_3755
Alternate gene names: 157371990
Gene position: 4151953-4152768 (Clockwise)
Preceding gene: 157371989
Following gene: 157371991
Centisome position: 76.2
GC content: 51.47
Gene sequence:
>816_bases ATGTCGTTAAAATTTAAATCCATCGCGGCAATCGGCGCACTGATCGGTACTCTGGCTCTGGCAGGCTGCGGTCAGGAAGA AAAAGATCCAAACCATATCAAAGTCGGCGTCATTGTCGGTGCTGAACAGCAGGTCGCTGAAATCGCGCAAAAAGTAGCAA AAGAGAAATACGGTCTGGACGTCGAACTGGTGACCTTCAATGACTACGTGCTGCCAAACGAAGCGCTGAGCAAAGGCGAT ATCGATCTGAACGCCTTCCAGCACAAACCTTACCTGGATCAGCAGATCAAGGATCGCGGCTACAAACTGGTGTCGGTCGG TAACTCCTTCGTTTACCCGATTGCCGGTTACTCCAAGAAAATCAAATCGCTGGACGAACTGAAAGACGGTTCTCAGGTTG CCCTGCCTAACGACCCAACCAATCTGGGCCGCTCCCTGCTGCTGCTGCAGAAGGTTAACCTGATCAAACTGAAAGACGGT GTTGGCCTGCTGCCGACCGTATTGGACGTGACTGAAAACCCGAAAAACCTGAAGCTGGTTGAACTGGAAGCACCACAGCT GCCACGCTCCCTGGACGACCAACAAATCGCTCTGGCGGTGATCAACACCACTTACGCCAGCCAGATTGGCCTGACGCCGG CAAAAGACGGCCTGTTTGTTGAAGATAAAGACTCACCGTACGTTAACCTGCTGGTTGCCCGCGAAGATAACAAAGACGCG GAAAACGTGAAGAAGTTCGTTCAGGCTTATCAGTCTGACGAAGTTAATGAAGCGGCCAACAAGATCTTTAACGGTGGCGC AGTTAAAGGCTGGTAA
Upstream 100 bases:
>100_bases TCTTCGGTGATCGGATCGTCAAGGCCGTCACCCATAAGTAGTTTTACAGCAACTGCGCTCACACAGCGTATTTCAAATGC GAGTCTAATGAGGAAGGGAT
Downstream 100 bases:
>100_bases TCATTAATTACCGAATTTATTCCTATAATTGCAAGACGGGCTACGGCCCGTCGAGAGAGTTGGCATAGTTCTTTGCGGCT AAAAGTAATGATTTAGTCCT
Product: DL-methionine transporter substrate-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSLKFKSIAAIGALIGTLALAGCGQEEKDPNHIKVGVIVGAEQQVAEIAQKVAKEKYGLDVELVTFNDYVLPNEALSKGD IDLNAFQHKPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKKIKSLDELKDGSQVALPNDPTNLGRSLLLLQKVNLIKLKDG VGLLPTVLDVTENPKNLKLVELEAPQLPRSLDDQQIALAVINTTYASQIGLTPAKDGLFVEDKDSPYVNLLVAREDNKDA ENVKKFVQAYQSDEVNEAANKIFNGGAVKGW
Sequences:
>Translated_271_residues MSLKFKSIAAIGALIGTLALAGCGQEEKDPNHIKVGVIVGAEQQVAEIAQKVAKEKYGLDVELVTFNDYVLPNEALSKGD IDLNAFQHKPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKKIKSLDELKDGSQVALPNDPTNLGRSLLLLQKVNLIKLKDG VGLLPTVLDVTENPKNLKLVELEAPQLPRSLDDQQIALAVINTTYASQIGLTPAKDGLFVEDKDSPYVNLLVAREDNKDA ENVKKFVQAYQSDEVNEAANKIFNGGAVKGW >Mature_270_residues SLKFKSIAAIGALIGTLALAGCGQEEKDPNHIKVGVIVGAEQQVAEIAQKVAKEKYGLDVELVTFNDYVLPNEALSKGDI DLNAFQHKPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKKIKSLDELKDGSQVALPNDPTNLGRSLLLLQKVNLIKLKDGV GLLPTVLDVTENPKNLKLVELEAPQLPRSLDDQQIALAVINTTYASQIGLTPAKDGLFVEDKDSPYVNLLVAREDNKDAE NVKKFVQAYQSDEVNEAANKIFNGGAVKGW
Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]
COG id: COG1464
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nlpA lipoprotein family [H]
Homologues:
Organism=Escherichia coli, GI1786396, Length=271, Percent_Identity=90.4059040590406, Blast_Score=503, Evalue=1e-144, Organism=Escherichia coli, GI1790093, Length=249, Percent_Identity=64.2570281124498, Blast_Score=343, Evalue=5e-96,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004872 - InterPro: IPR004478 [H]
Pfam domain/function: PF03180 Lipoprotein_9 [H]
EC number: NA
Molecular weight: Translated: 29503; Mature: 29372
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKFKSIAAIGALIGTLALAGCGQEEKDPNHIKVGVIVGAEQQVAEIAQKVAKEKYGLD CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCC VELVTFNDYVLPNEALSKGDIDLNAFQHKPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKK EEEEEECCEECCCHHHCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCEEEECCCHHHH IKSLDELKDGSQVALPNDPTNLGRSLLLLQKVNLIKLKDGVGLLPTVLDVTENPKNLKLV HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEE ELEAPQLPRSLDDQQIALAVINTTYASQIGLTPAKDGLFVEDKDSPYVNLLVAREDNKDA EECCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCH ENVKKFVQAYQSDEVNEAANKIFNGGAVKGW HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLKFKSIAAIGALIGTLALAGCGQEEKDPNHIKVGVIVGAEQQVAEIAQKVAKEKYGLD CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCC VELVTFNDYVLPNEALSKGDIDLNAFQHKPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKK EEEEEECCEECCCHHHCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCEEEECCCHHHH IKSLDELKDGSQVALPNDPTNLGRSLLLLQKVNLIKLKDGVGLLPTVLDVTENPKNLKLV HHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCCCCCEEEE ELEAPQLPRSLDDQQIALAVINTTYASQIGLTPAKDGLFVEDKDSPYVNLLVAREDNKDA EECCCCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCEEEECCCCCEEEEEEEECCCCCH ENVKKFVQAYQSDEVNEAANKIFNGGAVKGW HHHHHHHHHHCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]