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The map label for this gene is rcsF [H]

Identifier: 157371991

GI number: 157371991

Start: 4153035

End: 4153439

Strand: Direct

Name: rcsF [H]

Synonym: Spro_3756

Alternate gene names: 157371991

Gene position: 4153035-4153439 (Clockwise)

Preceding gene: 157371990

Following gene: 157371992

Centisome position: 76.22

GC content: 55.8

Gene sequence:

>405_bases
ATGCGTGCTTTACCTCTCTGTTTGTTAGCGCTTGCGCTGGCAGGGTGTTCGTCGCAGCGTTTCGCGCCCCCGTCCACAAG
CAGCACCAGCAAACCGGCAGTAACCACTCCGACCAAACCCACGCCAGCAGCGCGTCCGGCACCGGTTAAACTGTACAAAA
GTGCAGAAGAATTAGTGGGTAAACCATTCCGCGATCTGGGTGAAGTCTCTGGCGAATCCTGCCAGACAACCGTTCAGGAC
TCACCACCGAATCTGGCGACCGCTCGTAAGCGCATGCAAATCCGCGCCTCTTATATGAAGGCTAATGCCGTGCTGTTGCA
TGACTGCCAGATTGTCAGCGGTGTTGCCGGCTGTTACCAACAGGCTATTTGCCAGGGTTCAGCGCTTAACGTCTCGTCCA
AATGA

Upstream 100 bases:

>100_bases
TTGTCTTATATCTAGACGGGCTACGGCCCGTCTTGTTATTTCCACCATAGATTGCTTCAATAGCGCCACTTAACTATTCC
ATCAAGGCAGAGGAATCTCA

Downstream 100 bases:

>100_bases
CCGAATTTGTTTTCAACCAGATCGGTACCATCCGTTCACCGTATAAAGAAAAGTTCGCCGTCCCCCGCCAACCGGGGTTA
GTCGAAGACGGTGGCGGTGA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRALPLCLLALALAGCSSQRFAPPSTSSTSKPAVTTPTKPTPAARPAPVKLYKSAEELVGKPFRDLGEVSGESCQTTVQD
SPPNLATARKRMQIRASYMKANAVLLHDCQIVSGVAGCYQQAICQGSALNVSSK

Sequences:

>Translated_134_residues
MRALPLCLLALALAGCSSQRFAPPSTSSTSKPAVTTPTKPTPAARPAPVKLYKSAEELVGKPFRDLGEVSGESCQTTVQD
SPPNLATARKRMQIRASYMKANAVLLHDCQIVSGVAGCYQQAICQGSALNVSSK
>Mature_134_residues
MRALPLCLLALALAGCSSQRFAPPSTSSTSKPAVTTPTKPTPAARPAPVKLYKSAEELVGKPFRDLGEVSGESCQTTVQD
SPPNLATARKRMQIRASYMKANAVLLHDCQIVSGVAGCYQQAICQGSALNVSSK

Specific function: Essential component of the Rcs signaling system to promote transcription of the genes for colanic acid capsule synthesis. Together with rcsC, they probably promote the phosphorylation of rcsB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786394, Length=136, Percent_Identity=61.7647058823529, Blast_Score=165, Evalue=1e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14062; Mature: 14062

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00306 CASEIN_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALPLCLLALALAGCSSQRFAPPSTSSTSKPAVTTPTKPTPAARPAPVKLYKSAEELVG
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHC
KPFRDLGEVSGESCQTTVQDSPPNLATARKRMQIRASYMKANAVLLHDCQIVSGVAGCYQ
CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
QAICQGSALNVSSK
HHHHCCCCCCCCCC
>Mature Secondary Structure
MRALPLCLLALALAGCSSQRFAPPSTSSTSKPAVTTPTKPTPAARPAPVKLYKSAEELVG
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHC
KPFRDLGEVSGESCQTTVQDSPPNLATARKRMQIRASYMKANAVLLHDCQIVSGVAGCYQ
CCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHH
QAICQGSALNVSSK
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Stimulates colanic acid capsule synthesis [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]