| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is trxC [H]
Identifier: 157371981
GI number: 157371981
Start: 4136321
End: 4136740
Strand: Direct
Name: trxC [H]
Synonym: Spro_3746
Alternate gene names: 157371981
Gene position: 4136321-4136740 (Clockwise)
Preceding gene: 157371979
Following gene: 157371982
Centisome position: 75.91
GC content: 56.67
Gene sequence:
>420_bases ATGAATACAGTTTGTCCAGCTTGTAATGCCACCAACCGCGTGCCTGAAGAACGAGTGGCTGACGGCGCGAAATGCGGCCG TTGCGGCCATGCGCTCTTTGACGGCGAGGTGATCAACGCCACCGCCGCCACACTGGACTCGTTGTTGCAGGATGGTCTGC CAGTGGTGGTCGATTTTTGGGCGCCATGGTGCGGCCCCTGCGTCAGTTTTGCCCCGATCTTTGAAGACGTCGCCGAAGAG CGCGCCGGCAAAGTTCGCTTCGTTAAAGTCAACACCGAGGCAGAACCCGAACTGAGCGCCCGTTTCCGCATCCGCAGCAT TCCAACCATTATGCTGTTCCGCGAAGGGAAAATGGTCGACATGCTCAACGGTGCTATGCCGAAAACGCCGTTCGATAACT GGCTCAATGAACTAGTTTAA
Upstream 100 bases:
>100_bases TTGTCCATTGCCCTACTTTTAACGATAATAAGCAGCATTAAAGATACATATCCGCAACCCGAGTGCGGCATGTCGTGCAT TCTCAGTATCCGAGGTCATC
Downstream 100 bases:
>100_bases CGCAGAAAGTCTATACCCGTCGCCTTTCAATAGGCGGTGTTGTCCATTGCCCGTGACACCGCCGTGACGCAATCCAGCCC GAACGCTCCCGTCGGGCTTT
Product: thioredoxin 2
Products: NA
Alternate protein names: Trx-2; Protein-disulfide reductase [H]
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MNTVCPACNATNRVPEERVADGAKCGRCGHALFDGEVINATAATLDSLLQDGLPVVVDFWAPWCGPCVSFAPIFEDVAEE RAGKVRFVKVNTEAEPELSARFRIRSIPTIMLFREGKMVDMLNGAMPKTPFDNWLNELV
Sequences:
>Translated_139_residues MNTVCPACNATNRVPEERVADGAKCGRCGHALFDGEVINATAATLDSLLQDGLPVVVDFWAPWCGPCVSFAPIFEDVAEE RAGKVRFVKVNTEAEPELSARFRIRSIPTIMLFREGKMVDMLNGAMPKTPFDNWLNELV >Mature_139_residues MNTVCPACNATNRVPEERVADGAKCGRCGHALFDGEVINATAATLDSLLQDGLPVVVDFWAPWCGPCVSFAPIFEDVAEE RAGKVRFVKVNTEAEPELSARFRIRSIPTIMLFREGKMVDMLNGAMPKTPFDNWLNELV
Specific function: Efficient electron donor for the essential enzyme ribonucleotide reductase. Is also able to reduce the interchain disulfide bridges of insulin [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4758304, Length=100, Percent_Identity=34, Blast_Score=67, Evalue=5e-12, Organism=Homo sapiens, GI21361403, Length=94, Percent_Identity=30.8510638297872, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788936, Length=137, Percent_Identity=76.6423357664234, Blast_Score=230, Evalue=2e-62, Organism=Escherichia coli, GI87082331, Length=103, Percent_Identity=36.8932038834951, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI87081747, Length=105, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=2e-12, Organism=Caenorhabditis elegans, GI212646193, Length=111, Percent_Identity=28.8288288288288, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115532378, Length=67, Percent_Identity=43.2835820895522, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI115532380, Length=78, Percent_Identity=39.7435897435897, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17544108, Length=102, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17507705, Length=71, Percent_Identity=38.0281690140845, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193209454, Length=104, Percent_Identity=31.7307692307692, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569137, Length=104, Percent_Identity=31.7307692307692, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI32566189, Length=104, Percent_Identity=31.7307692307692, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI25144092, Length=88, Percent_Identity=31.8181818181818, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17556044, Length=81, Percent_Identity=37.037037037037, Blast_Score=62, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=87, Percent_Identity=35.632183908046, Blast_Score=64, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6321648, Length=88, Percent_Identity=36.3636363636364, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI28573567, Length=86, Percent_Identity=36.046511627907, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI17647799, Length=91, Percent_Identity=35.1648351648352, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI19921434, Length=100, Percent_Identity=37, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: =1.8.1.8 [H]
Molecular weight: Translated: 15287; Mature: 15287
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVCPACNATNRVPEERVADGAKCGRCGHALFDGEVINATAATLDSLLQDGLPVVVDFW CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEHH APWCGPCVSFAPIFEDVAEERAGKVRFVKVNTEAEPELSARFRIRSIPTIMLFREGKMVD CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHEECCCCCEEEEEECCCCHH MLNGAMPKTPFDNWLNELV HHCCCCCCCCHHHHHHHCC >Mature Secondary Structure MNTVCPACNATNRVPEERVADGAKCGRCGHALFDGEVINATAATLDSLLQDGLPVVVDFW CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCEEEEHH APWCGPCVSFAPIFEDVAEERAGKVRFVKVNTEAEPELSARFRIRSIPTIMLFREGKMVD CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHEECCCCCEEEEEECCCCHH MLNGAMPKTPFDNWLNELV HHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]