| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157371839
Identifier: 157371839
GI number: 157371839
Start: 3982428
End: 3983384
Strand: Reverse
Name: 157371839
Synonym: Spro_3604
Alternate gene names: NA
Gene position: 3983384-3982428 (Counterclockwise)
Preceding gene: 157371840
Following gene: 157371838
Centisome position: 73.11
GC content: 57.99
Gene sequence:
>957_bases ATGTCCTGGGAAACCTGGAGTTTTGCATTCAACGTCACCGTACCCAATCTGTTAATGATGTTGCTGGGCATATTGCTGCG CCACTGGCGCTTGATGGACGACCGTTTTATCGATGGCGCCACCAAGCTGGTGTTTAACCTGGCGCTGCCCTGTTTATTGT TCTTCAGCATCGCTACCAACCACCCGCAGTTGCTGGGCAACCTGCCGCTGGTAATCTTTGGCGCTATTGGCACCGTGGTC ACCTTCCTGCTGCTGGAAGTGGCGGCTATCTGGCTGGTTAAAGAGCCACGTGAGCGCGGTGTCTTTGTGCAGGGGGGCTT CCGGGCCAATACCGCCATTGTCGGCCTGGCCTATGCCATGACCGCTTACGGCAGTGAGGGCGTGGCGTTAGGGTCGCTGT ACCTGACGGTGACGGTGATCCTGTTTAACATACTGTCAGTGATTACCCTCACGCGCAGCCTGCAGGGCGGGCAGGGCAAG CGGATCAGCCGTTTGTCGCTGTTGCGCAGTATTGTCACCAATCCGCTGATTATCGGCCTGGTGTGCGGACTGGCTTATGC CCAGACCGGTCTGGGAATACCTCAGGTGATCCGGCAGACCGGCAGCTATATCTCCGCATTGTCGTTGCCGCTGGCCTTGC TGTGCACCGGCGCCAGTTTAGACCTGCGCGCCATGTTTCGTTCGTCCAACGTGGCGGCGCTGTCCTCTTCGGCCAAGCTG TTTGTCGTGCCAGTGATAATGACGCTGAGTGGCTGGCTGTGCGGTTTTCACGGCGCGGCGTTGGGGATTATTTTCCTGTT CTCGGCCACGCCAACGGCTTCTGGCAGCTATGTGATGACGCGTGCGATGGGGGGGAACGCCACGCTGGCGGCGAATATTA TCGCCATCACCACCGTCGGCTCGTTTTTCACTACCGCGTTGGGCATCTATTTCTTACGCTCATGGGGCGTGATTTAA
Upstream 100 bases:
>100_bases ATAAGAATGAGGGGCGCGGTATCACTACCGCGCCCCTTTTTTATTGGATCGAAATCGTTTTATTATCTGACTATTACCGC CGTTAGCCTGAAGGAACATC
Downstream 100 bases:
>100_bases CCAGGGAGTGACTATGGAAGCGCAGTGTCCGCAATGCGATCAAACGATGGAGTGGGTGAATGGTCACTACCATTGCCCCG CCTGTAACAGCGATTATCAG
Product: auxin efflux carrier
Products: NA
Alternate protein names: Permease; Malonate Transporter; Transporter AEC Family; Auxin Efflux Carrier Family Protein; Transporter Auxin Efflux Carrier Family; Membrane Transport Protein Family Transporter; Membrane Transporter; Transporter Auxin Efflux Carrier Family Protein; Efflux Protein; AEC Family Malonate Efflux Carrier; Transporter Of Auxin Efflux Carrier Family; Transmembrane Protein; Membrane Transport Protein Auxin Efflux Carrier; Auxin Efflux Carrier Protein; Membrane Transport Family; Permease Transmembrane Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSWETWSFAFNVTVPNLLMMLLGILLRHWRLMDDRFIDGATKLVFNLALPCLLFFSIATNHPQLLGNLPLVIFGAIGTVV TFLLLEVAAIWLVKEPRERGVFVQGGFRANTAIVGLAYAMTAYGSEGVALGSLYLTVTVILFNILSVITLTRSLQGGQGK RISRLSLLRSIVTNPLIIGLVCGLAYAQTGLGIPQVIRQTGSYISALSLPLALLCTGASLDLRAMFRSSNVAALSSSAKL FVVPVIMTLSGWLCGFHGAALGIIFLFSATPTASGSYVMTRAMGGNATLAANIIAITTVGSFFTTALGIYFLRSWGVI
Sequences:
>Translated_318_residues MSWETWSFAFNVTVPNLLMMLLGILLRHWRLMDDRFIDGATKLVFNLALPCLLFFSIATNHPQLLGNLPLVIFGAIGTVV TFLLLEVAAIWLVKEPRERGVFVQGGFRANTAIVGLAYAMTAYGSEGVALGSLYLTVTVILFNILSVITLTRSLQGGQGK RISRLSLLRSIVTNPLIIGLVCGLAYAQTGLGIPQVIRQTGSYISALSLPLALLCTGASLDLRAMFRSSNVAALSSSAKL FVVPVIMTLSGWLCGFHGAALGIIFLFSATPTASGSYVMTRAMGGNATLAANIIAITTVGSFFTTALGIYFLRSWGVI >Mature_317_residues SWETWSFAFNVTVPNLLMMLLGILLRHWRLMDDRFIDGATKLVFNLALPCLLFFSIATNHPQLLGNLPLVIFGAIGTVVT FLLLEVAAIWLVKEPRERGVFVQGGFRANTAIVGLAYAMTAYGSEGVALGSLYLTVTVILFNILSVITLTRSLQGGQGKR ISRLSLLRSIVTNPLIIGLVCGLAYAQTGLGIPQVIRQTGSYISALSLPLALLCTGASLDLRAMFRSSNVAALSSSAKLF VVPVIMTLSGWLCGFHGAALGIIFLFSATPTASGSYVMTRAMGGNATLAANIIAITTVGSFFTTALGIYFLRSWGVI
Specific function: Unknown
COG id: COG0679
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33990; Mature: 33859
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWETWSFAFNVTVPNLLMMLLGILLRHWRLMDDRFIDGATKLVFNLALPCLLFFSIATN CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPQLLGNLPLVIFGAIGTVVTFLLLEVAAIWLVKEPRERGVFVQGGFRANTAIVGLAYAM CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCHHHHHHHHHH TAYGSEGVALGSLYLTVTVILFNILSVITLTRSLQGGQGKRISRLSLLRSIVTNPLIIGL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHH VCGLAYAQTGLGIPQVIRQTGSYISALSLPLALLCTGASLDLRAMFRSSNVAALSSSAKL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCE FVVPVIMTLSGWLCGFHGAALGIIFLFSATPTASGSYVMTRAMGGNATLAANIIAITTVG EHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH SFFTTALGIYFLRSWGVI HHHHHHHHHHHHHHCCCC >Mature Secondary Structure SWETWSFAFNVTVPNLLMMLLGILLRHWRLMDDRFIDGATKLVFNLALPCLLFFSIATN CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPQLLGNLPLVIFGAIGTVVTFLLLEVAAIWLVKEPRERGVFVQGGFRANTAIVGLAYAM CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCHHHHHHHHHH TAYGSEGVALGSLYLTVTVILFNILSVITLTRSLQGGQGKRISRLSLLRSIVTNPLIIGL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHH VCGLAYAQTGLGIPQVIRQTGSYISALSLPLALLCTGASLDLRAMFRSSNVAALSSSAKL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCCE FVVPVIMTLSGWLCGFHGAALGIIFLFSATPTASGSYVMTRAMGGNATLAANIIAITTVG EHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH SFFTTALGIYFLRSWGVI HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA