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The map label for this gene is baeR [H]

Identifier: 157371792

GI number: 157371792

Start: 3934559

End: 3935278

Strand: Direct

Name: baeR [H]

Synonym: Spro_3557

Alternate gene names: 157371792

Gene position: 3934559-3935278 (Clockwise)

Preceding gene: 157371791

Following gene: 157371795

Centisome position: 72.21

GC content: 56.53

Gene sequence:

>720_bases
ATGATGGAAACCCAGAACCAGCCGTTGCAAATTATGATTGTTGAAGATGAACCCAAGCTGGGCCAACTGCTGGTGGACTA
CCTGCAGGCTGCGGGATACGCCACGCACTGGCTGACCAATGGCAGTGAGGTGGTGCCGGCGGTACATGCCCATTCCCCTG
CCTTGATCCTGCTGGACTTGATGCTACCGGGCAGCGACGGGTTAACGGTTTGCCGTGAGTTGCGCCGCTTTACCGATATT
CCGGTGGTGATGGTGACGGCGAAAATCGAGGAGATCGATCGCCTGCTGGGGCTGGAGATCGGCGCAGATGATTACATCTG
TAAACCTTACAGCCCGCGTGAAGTGGTCGCCAGGGTGAAAACCATTCTGCGCCGTTGCTACCGCCCATTGGATAATACGC
AGGAAGAAACCCAGCTTCACATTGATGAACCACGCTTTCAGGCCAGCTATCAGGGCCAAATGCTGGATCTCACCCCGGCA
GAGTTTCGCCTGCTGAAAACGCTGGCCAGCCAGCCGGGCAACGTGTTCTCACGTGAGCAACTGCTGAATAATCTGTATGA
CGACTACCGGGTCGTCACCGACCGTACCATCGACAGCCATATCAAAAACCTGCGGCGCAAGCTGGAACTGATCGACGGCG
AGAAGTCCTTTATCCGTTCGGTGTACGGCGTGGGCTATCGCTGGGAAGCCGAGCCTTGCCGGCTGGTGAATGGGCTTTAA

Upstream 100 bases:

>100_bases
TAGTGGAAGCACACAACGGGAAGATCTACGCACAGCACTCGCCTTTGGGCGGCGTGCGGATTACTGTAGAATTCGCCACC
CCGGTAATGAATAAGGCGTC

Downstream 100 bases:

>100_bases
GTCCAGTCTTCCACTGCCAGCCCTGGCACCATGGCGAACGCCTTATCGTTAGTCACAATCGTCGCACCGCGGCTCTGGGC
GTGTGCGGCAATAAGCTGAT

Product: DNA-binding transcriptional regulator BaeR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MMETQNQPLQIMIVEDEPKLGQLLVDYLQAAGYATHWLTNGSEVVPAVHAHSPALILLDLMLPGSDGLTVCRELRRFTDI
PVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCYRPLDNTQEETQLHIDEPRFQASYQGQMLDLTPA
EFRLLKTLASQPGNVFSREQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELIDGEKSFIRSVYGVGYRWEAEPCRLVNGL

Sequences:

>Translated_239_residues
MMETQNQPLQIMIVEDEPKLGQLLVDYLQAAGYATHWLTNGSEVVPAVHAHSPALILLDLMLPGSDGLTVCRELRRFTDI
PVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCYRPLDNTQEETQLHIDEPRFQASYQGQMLDLTPA
EFRLLKTLASQPGNVFSREQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELIDGEKSFIRSVYGVGYRWEAEPCRLVNGL
>Mature_239_residues
MMETQNQPLQIMIVEDEPKLGQLLVDYLQAAGYATHWLTNGSEVVPAVHAHSPALILLDLMLPGSDGLTVCRELRRFTDI
PVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVKTILRRCYRPLDNTQEETQLHIDEPRFQASYQGQMLDLTPA
EFRLLKTLASQPGNVFSREQLLNNLYDDYRVVTDRTIDSHIKNLRRKLELIDGEKSFIRSVYGVGYRWEAEPCRLVNGL

Specific function: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=234, Percent_Identity=75.6410256410256, Blast_Score=358, Evalue=1e-100,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=42.4657534246575, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=39.4618834080717, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=37.7777777777778, Blast_Score=153, Evalue=8e-39,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=34.2465753424658, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=40.2654867256637, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=31.3304721030043, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787229, Length=236, Percent_Identity=34.3220338983051, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=35.5555555555556, Blast_Score=117, Evalue=5e-28,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=32.4324324324324, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=33.6322869955157, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=29.2792792792793, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=31.0043668122271, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788550, Length=162, Percent_Identity=28.3950617283951, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790299, Length=129, Percent_Identity=29.4573643410853, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27356; Mature: 27356

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMETQNQPLQIMIVEDEPKLGQLLVDYLQAAGYATHWLTNGSEVVPAVHAHSPALILLDL
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCHHCCCCCEEEEEE
MLPGSDGLTVCRELRRFTDIPVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVK
CCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCEECCCCCEECCCCHHHHHHHHH
TILRRCYRPLDNTQEETQLHIDEPRFQASYQGQMLDLTPAEFRLLKTLASQPGNVFSREQ
HHHHHHCCCCCCCCCHHEEECCCCCHHHCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHH
LLNNLYDDYRVVTDRTIDSHIKNLRRKLELIDGEKSFIRSVYGVGYRWEAEPCRLVNGL
HHHHHHHHHEEHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCHHHHCCCC
>Mature Secondary Structure
MMETQNQPLQIMIVEDEPKLGQLLVDYLQAAGYATHWLTNGSEVVPAVHAHSPALILLDL
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCHHCCCCCEEEEEE
MLPGSDGLTVCRELRRFTDIPVVMVTAKIEEIDRLLGLEIGADDYICKPYSPREVVARVK
CCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCEECCCCCEECCCCHHHHHHHHH
TILRRCYRPLDNTQEETQLHIDEPRFQASYQGQMLDLTPAEFRLLKTLASQPGNVFSREQ
HHHHHHCCCCCCCCCHHEEECCCCCHHHCCCCCEEECCHHHHHHHHHHHCCCCCCHHHHH
LLNNLYDDYRVVTDRTIDSHIKNLRRKLELIDGEKSFIRSVYGVGYRWEAEPCRLVNGL
HHHHHHHHHEEHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]