| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is ppx [H]
Identifier: 157371777
GI number: 157371777
Start: 3912317
End: 3913867
Strand: Direct
Name: ppx [H]
Synonym: Spro_3542
Alternate gene names: 157371777
Gene position: 3912317-3913867 (Clockwise)
Preceding gene: 157371776
Following gene: 157371779
Centisome position: 71.8
GC content: 57.25
Gene sequence:
>1551_bases ATGCCGCTAAAAAGCACTGCAACAAATAAACCGCAGGAAATTGCTGCCATCGACCTCGGGTCGAACAGCTTCCATATGGT GATTGCCCGCGTCGTCAACGGCGCTTTACAGGTATTGGGCCGTTTAAAACAACGGGTCCACCTCGCCGATGGATTGGACA GCAACAATGTGCTCAGTGAAGAGGCAATAGAACGTGGACTGGCCTGCCTGGCGCTGTTTGCCGAACGGCTGCAGGGCTTC CCGGCGGATAACGTCACCATCGTCGGTACTCACACCCTGCGTCAGGCCGTTAACGCGGAAGTGTTTCTCAAACGTGCAGC TAAAGTGATCCCCTACCCGATTGAAATCATCGCCGGACAGGAAGAAGCGCGTCTGATCTTTATGGGCGTGGAGCACACCC AGCCGGAAAAAGGCCGCAAGCTGGTGATCGATATCGGCGGTGGTTCTACTGAGCTGGTGATCGGTGAAGACTTTGAGCCG CTGCTGGCAGAAAGCCGCCGTATGGGCTGCGTCAGTTTCGCCCAGCAGTTTTTCCCAGGCGGTGAAATCAGTAAAAACAA TTTCAAGCGTGCGCGCCTGGCAGCGGCACAGAAGCTGGAAACCCTGGCCTGGCAGTACCGTATTCAGGGTTGGCAGTATG CTCTGGGCGCGTCCGGTACCATCAAGGCCGCACACGAAGTGCTGGTGGCGATGGGCGAAAAAGACGGCCTGATCACCCTG GAACGGCTGGAGATGCTGACGGAGCAGGTGTTGCAGTTTAAAAGCTTCAGCTCCCTGAGCCTGCCGGGGCTGTCGGAAGA CCGTCAGTCGGTGTTTGTACCGGGTCTGGCTATCCTGTGCGGCGTGTTCGACGCGTTGGCAATCCGCGACCTGCGTCTTT CTGACGGCGCGCTGCGCGAAGGCGTGCTGTACGAAATGGAGGGCCGTTTCCGCCATCAGGATATCCGCAGCCGTACCGCC AAAAGCCTGGCCGATCACTACAATATCGACCGTGAGCAGGCCAAGCGGGTGCTGGACACCACCGAACTGCTGTACGCCCA ATGGATGGCGCAAAACACCAAGCTGGCAAATCCGCAGTTGGAAGCGCTGTTGAAATGGGCCGCCATGTTGCATGAGGTGG GGCTGAGCATCAACCACAGCGGCATGCATCGCCACTCGGCCTATATTCTGCAAAACACCAACCTGCCCGGTTTTAATCAG GAGCAGCAGTTGCTGCTGGCGGCGCTGGTGCGTTTCCACCGCAAGGGGATCAAGCTGGAAGAACTGCCGCGGCTGAACCT GTTCAAGAAAAAGCATTACCTGCCGCTGATCCAACTGCTGCGTTTGAGCACCCTGCTCAACAACCAGCGTCAGTCGACCA CCACACCCGAGACGCTGCGCCTGAGTACTGACGATAATCACTGGACGCTGCGTTTCCCGGCCGGTTATCTGGCGTTAAAC AACCTGGTACAACTGGATCTTGAACGTGAGCAGGCCTACTGGAATGACGTCGTCGGCTGGAAGCTGATTTGCGAAGAAGA AGAGACCCAAAACGAGCAACGTACTGCCTGA
Upstream 100 bases:
>100_bases CAGTACGTACCGCGCGGCAACCGCCGTAAAGTCCGTTCTCAGGTTGCCATTTACGAGTATTTAAAAGCTCTGGAACAACC AGGACAGTAGGCCAGCAACT
Downstream 100 bases:
>100_bases GTCTTTCGCCCCCTGCCTGCCGGGGGGCAACACTCAACGCGGTGTCGGTAACAGCGCCAGCAAGGGTTGTGGCTCGCCAA TGAAGTAGCCCTGCATATAG
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MPLKSTATNKPQEIAAIDLGSNSFHMVIARVVNGALQVLGRLKQRVHLADGLDSNNVLSEEAIERGLACLALFAERLQGF PADNVTIVGTHTLRQAVNAEVFLKRAAKVIPYPIEIIAGQEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEDFEP LLAESRRMGCVSFAQQFFPGGEISKNNFKRARLAAAQKLETLAWQYRIQGWQYALGASGTIKAAHEVLVAMGEKDGLITL ERLEMLTEQVLQFKSFSSLSLPGLSEDRQSVFVPGLAILCGVFDALAIRDLRLSDGALREGVLYEMEGRFRHQDIRSRTA KSLADHYNIDREQAKRVLDTTELLYAQWMAQNTKLANPQLEALLKWAAMLHEVGLSINHSGMHRHSAYILQNTNLPGFNQ EQQLLLAALVRFHRKGIKLEELPRLNLFKKKHYLPLIQLLRLSTLLNNQRQSTTTPETLRLSTDDNHWTLRFPAGYLALN NLVQLDLEREQAYWNDVVGWKLICEEEETQNEQRTA
Sequences:
>Translated_516_residues MPLKSTATNKPQEIAAIDLGSNSFHMVIARVVNGALQVLGRLKQRVHLADGLDSNNVLSEEAIERGLACLALFAERLQGF PADNVTIVGTHTLRQAVNAEVFLKRAAKVIPYPIEIIAGQEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEDFEP LLAESRRMGCVSFAQQFFPGGEISKNNFKRARLAAAQKLETLAWQYRIQGWQYALGASGTIKAAHEVLVAMGEKDGLITL ERLEMLTEQVLQFKSFSSLSLPGLSEDRQSVFVPGLAILCGVFDALAIRDLRLSDGALREGVLYEMEGRFRHQDIRSRTA KSLADHYNIDREQAKRVLDTTELLYAQWMAQNTKLANPQLEALLKWAAMLHEVGLSINHSGMHRHSAYILQNTNLPGFNQ EQQLLLAALVRFHRKGIKLEELPRLNLFKKKHYLPLIQLLRLSTLLNNQRQSTTTPETLRLSTDDNHWTLRFPAGYLALN NLVQLDLEREQAYWNDVVGWKLICEEEETQNEQRTA >Mature_515_residues PLKSTATNKPQEIAAIDLGSNSFHMVIARVVNGALQVLGRLKQRVHLADGLDSNNVLSEEAIERGLACLALFAERLQGFP ADNVTIVGTHTLRQAVNAEVFLKRAAKVIPYPIEIIAGQEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEDFEPL LAESRRMGCVSFAQQFFPGGEISKNNFKRARLAAAQKLETLAWQYRIQGWQYALGASGTIKAAHEVLVAMGEKDGLITLE RLEMLTEQVLQFKSFSSLSLPGLSEDRQSVFVPGLAILCGVFDALAIRDLRLSDGALREGVLYEMEGRFRHQDIRSRTAK SLADHYNIDREQAKRVLDTTELLYAQWMAQNTKLANPQLEALLKWAAMLHEVGLSINHSGMHRHSAYILQNTNLPGFNQE QQLLLAALVRFHRKGIKLEELPRLNLFKKKHYLPLIQLLRLSTLLNNQRQSTTTPETLRLSTDDNHWTLRFPAGYLALNN LVQLDLEREQAYWNDVVGWKLICEEEETQNEQRTA
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate of circa 500 residues long, while chains of circa 15 residues compete poorly with polyphosphate as substrate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=509, Percent_Identity=76.2278978388998, Blast_Score=795, Evalue=0.0, Organism=Escherichia coli, GI48994966, Length=488, Percent_Identity=39.5491803278689, Blast_Score=333, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 58014; Mature: 57883
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKSTATNKPQEIAAIDLGSNSFHMVIARVVNGALQVLGRLKQRVHLADGLDSNNVLSE CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EAIERGLACLALFAERLQGFPADNVTIVGTHTLRQAVNAEVFLKRAAKVIPYPIEIIAGQ HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC EEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEDFEPLLAESRRMGCVSFAQQFFPG CCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC GEISKNNFKRARLAAAQKLETLAWQYRIQGWQYALGASGTIKAAHEVLVAMGEKDGLITL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEH ERLEMLTEQVLQFKSFSSLSLPGLSEDRQSVFVPGLAILCGVFDALAIRDLRLSDGALRE HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHC GVLYEMEGRFRHQDIRSRTAKSLADHYNIDREQAKRVLDTTELLYAQWMAQNTKLANPQL CCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH EALLKWAAMLHEVGLSINHSGMHRHSAYILQNTNLPGFNQEQQLLLAALVRFHRKGIKLE HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHH ELPRLNLFKKKHYLPLIQLLRLSTLLNNQRQSTTTPETLRLSTDDNHWTLRFPAGYLALN HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHH NLVQLDLEREQAYWNDVVGWKLICEEEETQNEQRTA HHHEEECHHHHHHHHHCCCEEEEECCHHCCHHHCCC >Mature Secondary Structure PLKSTATNKPQEIAAIDLGSNSFHMVIARVVNGALQVLGRLKQRVHLADGLDSNNVLSE CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EAIERGLACLALFAERLQGFPADNVTIVGTHTLRQAVNAEVFLKRAAKVIPYPIEIIAGQ HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC EEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGEDFEPLLAESRRMGCVSFAQQFFPG CCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHCCC GEISKNNFKRARLAAAQKLETLAWQYRIQGWQYALGASGTIKAAHEVLVAMGEKDGLITL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEH ERLEMLTEQVLQFKSFSSLSLPGLSEDRQSVFVPGLAILCGVFDALAIRDLRLSDGALRE HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHCCCCCCCHHC GVLYEMEGRFRHQDIRSRTAKSLADHYNIDREQAKRVLDTTELLYAQWMAQNTKLANPQL CCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH EALLKWAAMLHEVGLSINHSGMHRHSAYILQNTNLPGFNQEQQLLLAALVRFHRKGIKLE HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHH ELPRLNLFKKKHYLPLIQLLRLSTLLNNQRQSTTTPETLRLSTDDNHWTLRFPAGYLALN HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCCHHHHHH NLVQLDLEREQAYWNDVVGWKLICEEEETQNEQRTA HHHEEECHHHHHHHHHCCCEEEEECCHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]