| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fpvA [H]
Identifier: 157371733
GI number: 157371733
Start: 3872628
End: 3874799
Strand: Direct
Name: fpvA [H]
Synonym: Spro_3496
Alternate gene names: 157371733
Gene position: 3872628-3874799 (Clockwise)
Preceding gene: 157371732
Following gene: 157371734
Centisome position: 71.07
GC content: 58.01
Gene sequence:
>2172_bases ATGACGAGTTTTATGATTCGCCTCTCCGGTGGCGCACTGCTGTGCCTGCCGGTGATGGTGGCGCAGGCTACGGGGGCCGA GCAGGCTCCCCGCCCACAGAAAGAAGAAACCCTGGAGGTGGTCGCTTCGCCGTTCAGCGATGACGGCAGCACCGAGAACA CCGGCTCCTACACCACCAGCCAGATGACCACCGCGACCGGCTTGCCGCTGAGCATCAAGGATACGCCGCAGTCGGTTTCG GTCATCACCCGCCAGCAAATTGACGATATCAACGCTTATTCGCTGAAGGATATTCTGCGCTGGTCCACCGGCGTCAGCGA GAGTAACTACGATAGCGAACGCTCCTCGTTCAATTACCGCGGTTTTAGCGTCGATAATTATCAATACGACGGCGTGCCCA CCTTCTTTGATTCCGGTTATTCCGGCGGTGAGTCAGAAATTGACTCGATCACCCTCGATCATGTCGAAATCGTCCGGGGT GCCGCCGGTTTGCTGAACGGCGTCGGTAATCCGGGGGCGGCCATCAACCTGGTCAGAAAGAAAGCCTCCAGCCTTTCGCC TTTTGCCCGCGTCGAACTCTCCGCCGGTTCCTGGGATCACTACCGCACCACGGTCGATGTCGGCACACCGCTCAACGACG AAGGCACCGTCCGGGTACGCGTCGCGGCCGCCGGCGAACGCAGCCACTCGTTTATGGACAGGCATCAGGAACGTAAAGGC ACAATCTATGGCACGCTGGAAGCCGATCTGAGCAGCGATACATTGCTGCGCCTGGGCGCGGATTATCAGCAGAACCGGCC TAAAGCCTCCACCTGGGGCGGTGCCCTGCCGACCGGCTGGTTCAGCGACGGCAGCGAGATCAATTGGGATCGCCACTACA GCGGCGCTTCTGACTGGTCGAGCTGGGATACCACGCTCAGCACCCAGTTCGCGACGCTGGAGCACCAGTTCGATAACGAC TGGAAAGGCGTGGCTAACTACACCCATAGCCGTCAGGCTTTCGATGCCAAAATGGCGATGAGTCTTGGTGGGCTGATCGA TCCCGATACCTGGGCGGTGGAACCTTCAAGCCCTTATGCCGGGCGTTATGAGGGTTACCGCGATCAACATGCGGTCGACC TGAAACTGAACGGTGATTTCAGCCTGCTGGGCCGCAACCACAAATTTGTGGTGGGCAGTTCTTCCGCCTGGCAGCACAGT TACAGCACCTATCGTAGTGCCAGCGCCTCACAACTGTTTAGCGGCAGCTTACTGGACTGGAACGGTGGCCTGGGTGAACC CGAGTGGTCGGACAAAATGCCACAGATGGATTACCGCACGCGGCAAATCGGCTTCTACAGCAGCGCTGACTTTTCGCTAA CCGACCGTCTGGATCTGGTGCTCGGTGCCCGCTTCAACAGCTTTAAAAACACCACGACCACCACCGCAAACAAGGTCACG CCGTTCGTCGGCACGGTTTATAAGCTGACCGATCAGGTCTCTGCCTATGCCAGCTACACCGACATCTTCAAGGATCAGAA CCTGCTCGACAGCAGTGGCCACTATCTGGCACCAATCGAAGGGGTGAACAAAGAGGTGGGTATCAAAGCCGCGTTGCTCA ATGACCGGCTCAACCTGTCGCTGTCGGCATTCCGCATCACGCAGGACAACCTGGGCGTGCTGGACGAAGACACCACCAAT CTGGACTGGCTGCAGCAGACCTATCATGAGAGCCAGGGTGCCACCAGCAAGGGCATCGAGTTCGAACTGAACGGTGAGCT GGCCCAGGGCTGGAACGCGCAGTTTGGCATCACGCACTTCTCGCTGAAGGACAAGGATAAGGTTGATCTCAACACCGAGC AGCCGCGCACGCGTATCAACCTGTTCACCACCTACCAACTGACGGGTGCCTTGCGCGACCTGACGCTGGGCGGCGGCGCA CGCTGGCAGAGCAAGGTTTACGCCAACGTTAGCGGGGCCGATAACGGTGAAATGGTGCAGCGCAAAGCCGAGCAAGGATC TTATGTCCTGGTCGATGCAATGGCACGCTACAGGCTGACGCCGCAAACCTCGGTGCAACTTAACCTGAACAACGTTTTCG ACCAGAAATACTACTCGCAGGTTAATTTCTACAGTACCCGTAACTATGGCGAACCGCGTAACTTCATGCTTACGCTCAAA CACGAGTTCTGA
Upstream 100 bases:
>100_bases GCAATACCCTCTTTGCCAGCATCAAGCAGTCCAAGGAAGAGATGGAGAAAAAGCAGGATTATCTGCTCAAGATTAATCTC GGCGAACTATGAGGCAGGTA
Downstream 100 bases:
>100_bases TCATCCGCAGTAAACTGGCCCCAGACTACGGGGCCAACCTTCCCTCTGTAATGCCTTAGCCCTTGTGCGATGAATTCTTC CGTAGTAGCGTGCAAAAGAT
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MTSFMIRLSGGALLCLPVMVAQATGAEQAPRPQKEETLEVVASPFSDDGSTENTGSYTTSQMTTATGLPLSIKDTPQSVS VITRQQIDDINAYSLKDILRWSTGVSESNYDSERSSFNYRGFSVDNYQYDGVPTFFDSGYSGGESEIDSITLDHVEIVRG AAGLLNGVGNPGAAINLVRKKASSLSPFARVELSAGSWDHYRTTVDVGTPLNDEGTVRVRVAAAGERSHSFMDRHQERKG TIYGTLEADLSSDTLLRLGADYQQNRPKASTWGGALPTGWFSDGSEINWDRHYSGASDWSSWDTTLSTQFATLEHQFDND WKGVANYTHSRQAFDAKMAMSLGGLIDPDTWAVEPSSPYAGRYEGYRDQHAVDLKLNGDFSLLGRNHKFVVGSSSAWQHS YSTYRSASASQLFSGSLLDWNGGLGEPEWSDKMPQMDYRTRQIGFYSSADFSLTDRLDLVLGARFNSFKNTTTTTANKVT PFVGTVYKLTDQVSAYASYTDIFKDQNLLDSSGHYLAPIEGVNKEVGIKAALLNDRLNLSLSAFRITQDNLGVLDEDTTN LDWLQQTYHESQGATSKGIEFELNGELAQGWNAQFGITHFSLKDKDKVDLNTEQPRTRINLFTTYQLTGALRDLTLGGGA RWQSKVYANVSGADNGEMVQRKAEQGSYVLVDAMARYRLTPQTSVQLNLNNVFDQKYYSQVNFYSTRNYGEPRNFMLTLK HEF
Sequences:
>Translated_723_residues MTSFMIRLSGGALLCLPVMVAQATGAEQAPRPQKEETLEVVASPFSDDGSTENTGSYTTSQMTTATGLPLSIKDTPQSVS VITRQQIDDINAYSLKDILRWSTGVSESNYDSERSSFNYRGFSVDNYQYDGVPTFFDSGYSGGESEIDSITLDHVEIVRG AAGLLNGVGNPGAAINLVRKKASSLSPFARVELSAGSWDHYRTTVDVGTPLNDEGTVRVRVAAAGERSHSFMDRHQERKG TIYGTLEADLSSDTLLRLGADYQQNRPKASTWGGALPTGWFSDGSEINWDRHYSGASDWSSWDTTLSTQFATLEHQFDND WKGVANYTHSRQAFDAKMAMSLGGLIDPDTWAVEPSSPYAGRYEGYRDQHAVDLKLNGDFSLLGRNHKFVVGSSSAWQHS YSTYRSASASQLFSGSLLDWNGGLGEPEWSDKMPQMDYRTRQIGFYSSADFSLTDRLDLVLGARFNSFKNTTTTTANKVT PFVGTVYKLTDQVSAYASYTDIFKDQNLLDSSGHYLAPIEGVNKEVGIKAALLNDRLNLSLSAFRITQDNLGVLDEDTTN LDWLQQTYHESQGATSKGIEFELNGELAQGWNAQFGITHFSLKDKDKVDLNTEQPRTRINLFTTYQLTGALRDLTLGGGA RWQSKVYANVSGADNGEMVQRKAEQGSYVLVDAMARYRLTPQTSVQLNLNNVFDQKYYSQVNFYSTRNYGEPRNFMLTLK HEF >Mature_722_residues TSFMIRLSGGALLCLPVMVAQATGAEQAPRPQKEETLEVVASPFSDDGSTENTGSYTTSQMTTATGLPLSIKDTPQSVSV ITRQQIDDINAYSLKDILRWSTGVSESNYDSERSSFNYRGFSVDNYQYDGVPTFFDSGYSGGESEIDSITLDHVEIVRGA AGLLNGVGNPGAAINLVRKKASSLSPFARVELSAGSWDHYRTTVDVGTPLNDEGTVRVRVAAAGERSHSFMDRHQERKGT IYGTLEADLSSDTLLRLGADYQQNRPKASTWGGALPTGWFSDGSEINWDRHYSGASDWSSWDTTLSTQFATLEHQFDNDW KGVANYTHSRQAFDAKMAMSLGGLIDPDTWAVEPSSPYAGRYEGYRDQHAVDLKLNGDFSLLGRNHKFVVGSSSAWQHSY STYRSASASQLFSGSLLDWNGGLGEPEWSDKMPQMDYRTRQIGFYSSADFSLTDRLDLVLGARFNSFKNTTTTTANKVTP FVGTVYKLTDQVSAYASYTDIFKDQNLLDSSGHYLAPIEGVNKEVGIKAALLNDRLNLSLSAFRITQDNLGVLDEDTTNL DWLQQTYHESQGATSKGIEFELNGELAQGWNAQFGITHFSLKDKDKVDLNTEQPRTRINLFTTYQLTGALRDLTLGGGAR WQSKVYANVSGADNGEMVQRKAEQGSYVLVDAMARYRLTPQTSVQLNLNNVFDQKYYSQVNFYSTRNYGEPRNFMLTLKH EF
Specific function: Receptor for the siderophore ferripyoverdine [H]
COG id: COG4773
COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=727, Percent_Identity=35.7634112792297, Blast_Score=432, Evalue=1e-122, Organism=Escherichia coli, GI1786344, Length=750, Percent_Identity=22.5333333333333, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI1787024, Length=213, Percent_Identity=27.2300469483568, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80110; Mature: 79979
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFMIRLSGGALLCLPVMVAQATGAEQAPRPQKEETLEVVASPFSDDGSTENTGSYTTS CCEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEC QMTTATGLPLSIKDTPQSVSVITRQQIDDINAYSLKDILRWSTGVSESNYDSERSSFNYR CEEEECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCC GFSVDNYQYDGVPTFFDSGYSGGESEIDSITLDHVEIVRGAAGLLNGVGNPGAAINLVRK CEEECCEEECCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KASSLSPFARVELSAGSWDHYRTTVDVGTPLNDEGTVRVRVAAAGERSHSFMDRHQERKG HHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCC TIYGTLEADLSSDTLLRLGADYQQNRPKASTWGGALPTGWFSDGSEINWDRHYSGASDWS CEEEEEECCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SWDTTLSTQFATLEHQFDNDWKGVANYTHSRQAFDAKMAMSLGGLIDPDTWAVEPSSPYA CCCCCHHHHEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC GRYEGYRDQHAVDLKLNGDFSLLGRNHKFVVGSSSAWQHSYSTYRSASASQLFSGSLLDW CCCCCCCCCEEEEEEECCCEEEEECCEEEEEECCCCCHHHHHHHHCCCHHHHHCCCEEEC NGGLGEPEWSDKMPQMDYRTRQIGFYSSADFSLTDRLDLVLGARFNSFKNTTTTTANKVT CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC PFVGTVYKLTDQVSAYASYTDIFKDQNLLDSSGHYLAPIEGVNKEVGIKAALLNDRLNLS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEE LSAFRITQDNLGVLDEDTTNLDWLQQTYHESQGATSKGIEFELNGELAQGWNAQFGITHF EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCEECEEEE SLKDKDKVDLNTEQPRTRINLFTTYQLTGALRDLTLGGGARWQSKVYANVSGADNGEMVQ ECCCCCCCCCCCCCCCEEEEEEEEEEECCCHHEEEECCCCCCCCEEEEECCCCCCHHHHH RKAEQGSYVLVDAMARYRLTPQTSVQLNLNNVFDQKYYSQVNFYSTRNYGEPRNFMLTLK HHHHCCCEEEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEE HEF ECC >Mature Secondary Structure TSFMIRLSGGALLCLPVMVAQATGAEQAPRPQKEETLEVVASPFSDDGSTENTGSYTTS CEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEC QMTTATGLPLSIKDTPQSVSVITRQQIDDINAYSLKDILRWSTGVSESNYDSERSSFNYR CEEEECCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCC GFSVDNYQYDGVPTFFDSGYSGGESEIDSITLDHVEIVRGAAGLLNGVGNPGAAINLVRK CEEECCEEECCCCHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHH KASSLSPFARVELSAGSWDHYRTTVDVGTPLNDEGTVRVRVAAAGERSHSFMDRHQERKG HHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCC TIYGTLEADLSSDTLLRLGADYQQNRPKASTWGGALPTGWFSDGSEINWDRHYSGASDWS CEEEEEECCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SWDTTLSTQFATLEHQFDNDWKGVANYTHSRQAFDAKMAMSLGGLIDPDTWAVEPSSPYA CCCCCHHHHEEEEHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCC GRYEGYRDQHAVDLKLNGDFSLLGRNHKFVVGSSSAWQHSYSTYRSASASQLFSGSLLDW CCCCCCCCCEEEEEEECCCEEEEECCEEEEEECCCCCHHHHHHHHCCCHHHHHCCCEEEC NGGLGEPEWSDKMPQMDYRTRQIGFYSSADFSLTDRLDLVLGARFNSFKNTTTTTANKVT CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC PFVGTVYKLTDQVSAYASYTDIFKDQNLLDSSGHYLAPIEGVNKEVGIKAALLNDRLNLS CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEE LSAFRITQDNLGVLDEDTTNLDWLQQTYHESQGATSKGIEFELNGELAQGWNAQFGITHF EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCCCEECEEEE SLKDKDKVDLNTEQPRTRINLFTTYQLTGALRDLTLGGGARWQSKVYANVSGADNGEMVQ ECCCCCCCCCCCCCCCEEEEEEEEEEECCCHHEEEECCCCCCCCEEEEECCCCCCHHHHH RKAEQGSYVLVDAMARYRLTPQTSVQLNLNNVFDQKYYSQVNFYSTRNYGEPRNFMLTLK HHHHCCCEEEEEEHHHHCCCCCCEEEEEHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEE HEF ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8335619; 8918232; 10984043 [H]