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The map label for this gene is yncE [H]

Identifier: 157371732

GI number: 157371732

Start: 3871549

End: 3872619

Strand: Direct

Name: yncE [H]

Synonym: Spro_3495

Alternate gene names: 157371732

Gene position: 3871549-3872619 (Clockwise)

Preceding gene: 157371730

Following gene: 157371733

Centisome position: 71.05

GC content: 53.31

Gene sequence:

>1071_bases
ATGAAATTATCCCTGTTCACCCCAGGCAAAGGTTTCTCTTTCAGCACCCTGACTTCCGCCATGCTGCTGCTGTCTTGCTC
AACGCTGGCGGCTGAGCTGCCAGAAAGCCATTTCCAAACCAAAGCGGTGGGATACGGCCTGTATGAGCTGGCATTTGATG
GCCAAAACAACAGCCTGTTTGCCGCCTCTACCCCTTCATTCGCCAAAGATAAAAACAGCGGCATTGTCTACCGCATCAAT
CCGGCCACGCTGGCCACCGAGGGGAAGATCGTTACCCAACGCCGCGCCTTCGCCACCGCGCTGGATGAAGAACGCCATGT
CTTGTACATCGGCAATACCGTGGATGGTTCAGTAACGATGATCGATACCCAGAGCGGTAAAGAACTCGCTACCGTCCAGC
TCAGTGAAAGTATGAAAGACGACCAATTCGTCCCGACGCGTGAAATGGTGCTCGATAAGAAAAATCAGCGTTTGTATGTC
TCAGGCACCGCTCAGAAAGGCGTACTGTGGGTGATCGATACCGCCAAACGGGAAAAAATTGCCACCATCAGCGACGTTGG
GGAATACCCTACCGGTCTTGCTCTGGACACCGAACGTGGTCATATCTACTGCGTTAACGGCGGCGGTGAACTGATTACCC
TGGACGCCACCAGCCACAAAATCCTCAAGCGTCTGGTGGTGGAACCCACTAAAAAACACTTCTTCTTGAATATCAGCCTG
GACAGCAAAACCGGCCGTGCCTTCCTCACCGATCCTGACCTGCCGAAGGTGCTGGTTGTCGATATCAACAGCGGCAAAAT
CCTGCACCAGATTGAGGTGATCAACTCTCTGGCCGTGCTGTTCAACCCGGCACGCAGCGAAATCTACATCACGCACCGCG
AGGCCAAACGCATCAGCATCGTGGACAGCAACAGCTACCAGGTCAAAAACAGCATCCTCACCACCGCACTGCCTAACAGC
CTGGCCCTTTCTGCGGACGGCAATACCCTCTTTGCCAGCATCAAGCAGTCCAAGGAAGAGATGGAGAAAAAGCAGGATTA
TCTGCTCAAGATTAATCTCGGCGAACTATGA

Upstream 100 bases:

>100_bases
GCAAACACAACTATCACTGTATGATTAATTAAATGATATTGATATTAATTATCAATATCATTAGCATCCTTGAATCGTAA
ACTGATGTAAAGGAATGTAT

Downstream 100 bases:

>100_bases
GGCAGGTAATGACGAGTTTTATGATTCGCCTCTCCGGTGGCGCACTGCTGTGCCTGCCGGTGATGGTGGCGCAGGCTACG
GGGGCCGAGCAGGCTCCCCG

Product: putative receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKLSLFTPGKGFSFSTLTSAMLLLSCSTLAAELPESHFQTKAVGYGLYELAFDGQNNSLFAASTPSFAKDKNSGIVYRIN
PATLATEGKIVTQRRAFATALDEERHVLYIGNTVDGSVTMIDTQSGKELATVQLSESMKDDQFVPTREMVLDKKNQRLYV
SGTAQKGVLWVIDTAKREKIATISDVGEYPTGLALDTERGHIYCVNGGGELITLDATSHKILKRLVVEPTKKHFFLNISL
DSKTGRAFLTDPDLPKVLVVDINSGKILHQIEVINSLAVLFNPARSEIYITHREAKRISIVDSNSYQVKNSILTTALPNS
LALSADGNTLFASIKQSKEEMEKKQDYLLKINLGEL

Sequences:

>Translated_356_residues
MKLSLFTPGKGFSFSTLTSAMLLLSCSTLAAELPESHFQTKAVGYGLYELAFDGQNNSLFAASTPSFAKDKNSGIVYRIN
PATLATEGKIVTQRRAFATALDEERHVLYIGNTVDGSVTMIDTQSGKELATVQLSESMKDDQFVPTREMVLDKKNQRLYV
SGTAQKGVLWVIDTAKREKIATISDVGEYPTGLALDTERGHIYCVNGGGELITLDATSHKILKRLVVEPTKKHFFLNISL
DSKTGRAFLTDPDLPKVLVVDINSGKILHQIEVINSLAVLFNPARSEIYITHREAKRISIVDSNSYQVKNSILTTALPNS
LALSADGNTLFASIKQSKEEMEKKQDYLLKINLGEL
>Mature_356_residues
MKLSLFTPGKGFSFSTLTSAMLLLSCSTLAAELPESHFQTKAVGYGLYELAFDGQNNSLFAASTPSFAKDKNSGIVYRIN
PATLATEGKIVTQRRAFATALDEERHVLYIGNTVDGSVTMIDTQSGKELATVQLSESMKDDQFVPTREMVLDKKNQRLYV
SGTAQKGVLWVIDTAKREKIATISDVGEYPTGLALDTERGHIYCVNGGGELITLDATSHKILKRLVVEPTKKHFFLNISL
DSKTGRAFLTDPDLPKVLVVDINSGKILHQIEVINSLAVLFNPARSEIYITHREAKRISIVDSNSYQVKNSILTTALPNS
LALSADGNTLFASIKQSKEEMEKKQDYLLKINLGEL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=332, Percent_Identity=40.9638554216867, Blast_Score=247, Evalue=7e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR015943 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39112; Mature: 39112

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLFTPGKGFSFSTLTSAMLLLSCSTLAAELPESHFQTKAVGYGLYELAFDGQNNSLF
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCCEEEEEEEECCCCEEE
AASTPSFAKDKNSGIVYRINPATLATEGKIVTQRRAFATALDEERHVLYIGNTVDGSVTM
EECCCCCCCCCCCCEEEEECCCEEEECCEEEEHHHHHHHHCCCCCEEEEECCCCCCEEEE
IDTQSGKELATVQLSESMKDDQFVPTREMVLDKKNQRLYVSGTAQKGVLWVIDTAKREKI
EECCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCE
ATISDVGEYPTGLALDTERGHIYCVNGGGELITLDATSHKILKRLVVEPTKKHFFLNISL
EEHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEEE
DSKTGRAFLTDPDLPKVLVVDINSGKILHQIEVINSLAVLFNPARSEIYITHREAKRISI
CCCCCEEEECCCCCCEEEEEECCCCCEEEHHHHHHHEEEEECCCCCEEEEEECCCEEEEE
VDSNSYQVKNSILTTALPNSLALSADGNTLFASIKQSKEEMEKKQDYLLKINLGEL
EECCCEEEEEEEEEEECCCCEEEECCCCEEEEHHHHHHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure
MKLSLFTPGKGFSFSTLTSAMLLLSCSTLAAELPESHFQTKAVGYGLYELAFDGQNNSLF
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHCCEEEEEEEECCCCEEE
AASTPSFAKDKNSGIVYRINPATLATEGKIVTQRRAFATALDEERHVLYIGNTVDGSVTM
EECCCCCCCCCCCCEEEEECCCEEEECCEEEEHHHHHHHHCCCCCEEEEECCCCCCEEEE
IDTQSGKELATVQLSESMKDDQFVPTREMVLDKKNQRLYVSGTAQKGVLWVIDTAKREKI
EECCCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCE
ATISDVGEYPTGLALDTERGHIYCVNGGGELITLDATSHKILKRLVVEPTKKHFFLNISL
EEHHHCCCCCCCEEEECCCCEEEEECCCCCEEEEECCHHHHHHHHHCCCCCCEEEEEEEE
DSKTGRAFLTDPDLPKVLVVDINSGKILHQIEVINSLAVLFNPARSEIYITHREAKRISI
CCCCCEEEECCCCCCEEEEEECCCCCEEEHHHHHHHEEEEECCCCCEEEEEECCCEEEEE
VDSNSYQVKNSILTTALPNSLALSADGNTLFASIKQSKEEMEKKQDYLLKINLGEL
EECCCEEEEEEEEEEECCCCEEEECCCCEEEEHHHHHHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]