| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yfeO [H]
Identifier: 157371645
GI number: 157371645
Start: 3769373
End: 3770620
Strand: Direct
Name: yfeO [H]
Synonym: Spro_3408
Alternate gene names: 157371645
Gene position: 3769373-3770620 (Clockwise)
Preceding gene: 157371643
Following gene: 157371648
Centisome position: 69.18
GC content: 59.38
Gene sequence:
>1248_bases ATGCTGCACCCGCGCGCCAATGCCATGTTGGCTTTCGCTCTGCCCGCTCTCGTTATCGGTTCGGCCTCAAGCCTGGTGCT CATTCTGGTGATGAAGTTCGCCGATGCGCTGCAGCGGTTGCTGTGGGTGAATATTCCTGCGGCTATGAATATCGATACTC ATTCGCCCTGGTGGCTGATCGGCATTCTGACGCTGACCGGCGTCGCCGTTGGGCTGATAATCCGCTATATGCCTGGCCAT GCGGGGCCTGATCCGGCCACTGAATCTTTGATCGGGATGCCGCTGCCGCTTTCGGCGCTGCCCGGTCTTACGCTGGCACT GATCGTTGGCCTGGTGGGTGGCGTCAGTCTGGGGCCGGAAAACCCGATCACCGCCATCAATATTGCGCTGGTGGTGGCAA TAGGTTCGCGCCTGCTACCGAAAGTCCCCCGCATGGACTGGATTATTTTGGCCGCGGCCGGCACCATCGGCGCACTGTTC GGTACCCCGGTTGCCGCTGCGCTGATCTTTTCGCAAACGCTGGCAGGCAATAATGACGTGCCGCTGTGGGATCGGCTATT TGCCCCGTTAATGGCGGCAGCGGCCGGTGCGGTCACTACACAGTTATTTTTCACGCCGAACTTTGCCCTGCAGCTTGATC CCTACACCGTCACCCGACTGACGGATATTTTCAGTGGTTCCATCGTCGCCCTGATCGCCATCGCACTGGGCATGGTGGCG CTATGGAGCTTCCCACACGCCCACCGTCTGTTCCACTCGATAAAAAATCCGGTGCTGATGCTGGGATTGGGCGGTTTTGT GCTTGGGTTGCTGGCGTTAATCGGTGGCGACATCACCCTCTTTAAAGGGCTCGATGAAATGAAGCGGCTGGCGATCGGAG AGAATTATTCTGTCACGGAGCTACTGCTGATTACGCTGAGCAAATTGGCGGCTCTGGTGATTGCTGCCGCCAGCGGCTTT CGTGGTGGACGTATCTTCCCGGCGGTGTTTGTCGGGGTTGCGCTGGGCCTGATGCTGCATCAGCATGTTCCGGCGGTACC GGCGGCGATTACCGTTTCCTGCGCCATTATGGGGTTGGTATTGGTGGTCACGCGTGACGGCTGGCTCAGCCTGTTTATGG CCGTTGCCGTGGTGCCGGAACTGCATCTGCTGCCCATACTCTGTGTGGTGATGTTGCCCGCCTGGCTGGTGCTGGCGGGC AAACCGCTGATGCTGGTGGGCAAGCGCCACTCTGCGCAGGACGATTAA
Upstream 100 bases:
>100_bases AATATCATTGCGTGCCAGAGTGCCGATTGTCTGGCAAGCTGTGGCCATAACCATCACCCGTTCGGCCTGCCATCCAGCGC CATTGAAAAGGGATCCCTGC
Downstream 100 bases:
>100_bases GCGAGCGCGTATTCCGCTGCGGCGCGCGCATGGATGGCGGTGGTGTCGAAGACCGGCACTGACGCATCCTGCGCGCTGAC CAGCAGGCCAATCTCGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MLHPRANAMLAFALPALVIGSASSLVLILVMKFADALQRLLWVNIPAAMNIDTHSPWWLIGILTLTGVAVGLIIRYMPGH AGPDPATESLIGMPLPLSALPGLTLALIVGLVGGVSLGPENPITAINIALVVAIGSRLLPKVPRMDWIILAAAGTIGALF GTPVAAALIFSQTLAGNNDVPLWDRLFAPLMAAAAGAVTTQLFFTPNFALQLDPYTVTRLTDIFSGSIVALIAIALGMVA LWSFPHAHRLFHSIKNPVLMLGLGGFVLGLLALIGGDITLFKGLDEMKRLAIGENYSVTELLLITLSKLAALVIAAASGF RGGRIFPAVFVGVALGLMLHQHVPAVPAAITVSCAIMGLVLVVTRDGWLSLFMAVAVVPELHLLPILCVVMLPAWLVLAG KPLMLVGKRHSAQDD
Sequences:
>Translated_415_residues MLHPRANAMLAFALPALVIGSASSLVLILVMKFADALQRLLWVNIPAAMNIDTHSPWWLIGILTLTGVAVGLIIRYMPGH AGPDPATESLIGMPLPLSALPGLTLALIVGLVGGVSLGPENPITAINIALVVAIGSRLLPKVPRMDWIILAAAGTIGALF GTPVAAALIFSQTLAGNNDVPLWDRLFAPLMAAAAGAVTTQLFFTPNFALQLDPYTVTRLTDIFSGSIVALIAIALGMVA LWSFPHAHRLFHSIKNPVLMLGLGGFVLGLLALIGGDITLFKGLDEMKRLAIGENYSVTELLLITLSKLAALVIAAASGF RGGRIFPAVFVGVALGLMLHQHVPAVPAAITVSCAIMGLVLVVTRDGWLSLFMAVAVVPELHLLPILCVVMLPAWLVLAG KPLMLVGKRHSAQDD >Mature_415_residues MLHPRANAMLAFALPALVIGSASSLVLILVMKFADALQRLLWVNIPAAMNIDTHSPWWLIGILTLTGVAVGLIIRYMPGH AGPDPATESLIGMPLPLSALPGLTLALIVGLVGGVSLGPENPITAINIALVVAIGSRLLPKVPRMDWIILAAAGTIGALF GTPVAAALIFSQTLAGNNDVPLWDRLFAPLMAAAAGAVTTQLFFTPNFALQLDPYTVTRLTDIFSGSIVALIAIALGMVA LWSFPHAHRLFHSIKNPVLMLGLGGFVLGLLALIGGDITLFKGLDEMKRLAIGENYSVTELLLITLSKLAALVIAAASGF RGGRIFPAVFVGVALGLMLHQHVPAVPAAITVSCAIMGLVLVVTRDGWLSLFMAVAVVPELHLLPILCVVMLPAWLVLAG KPLMLVGKRHSAQDD
Specific function: Unknown
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]
Homologues:
Organism=Escherichia coli, GI1788733, Length=417, Percent_Identity=67.8657074340528, Blast_Score=500, Evalue=1e-143,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022969 - InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 43549; Mature: 43549
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHPRANAMLAFALPALVIGSASSLVLILVMKFADALQRLLWVNIPAAMNIDTHSPWWLI CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHH GILTLTGVAVGLIIRYMPGHAGPDPATESLIGMPLPLSALPGLTLALIVGLVGGVSLGPE HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCC NPITAINIALVVAIGSRLLPKVPRMDWIILAAAGTIGALFGTPVAAALIFSQTLAGNNDV CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC PLWDRLFAPLMAAAAGAVTTQLFFTPNFALQLDPYTVTRLTDIFSGSIVALIAIALGMVA CHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHH LWSFPHAHRLFHSIKNPVLMLGLGGFVLGLLALIGGDITLFKGLDEMKRLAIGENYSVTE HHCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHCHHHHHHHHCCCCCCHHH LLLITLSKLAALVIAAASGFRGGRIFPAVFVGVALGLMLHQHVPAVPAAITVSCAIMGLV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LVVTRDGWLSLFMAVAVVPELHLLPILCVVMLPAWLVLAGKPLMLVGKRHSAQDD HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC >Mature Secondary Structure MLHPRANAMLAFALPALVIGSASSLVLILVMKFADALQRLLWVNIPAAMNIDTHSPWWLI CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHH GILTLTGVAVGLIIRYMPGHAGPDPATESLIGMPLPLSALPGLTLALIVGLVGGVSLGPE HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCC NPITAINIALVVAIGSRLLPKVPRMDWIILAAAGTIGALFGTPVAAALIFSQTLAGNNDV CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCC PLWDRLFAPLMAAAAGAVTTQLFFTPNFALQLDPYTVTRLTDIFSGSIVALIAIALGMVA CHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHH LWSFPHAHRLFHSIKNPVLMLGLGGFVLGLLALIGGDITLFKGLDEMKRLAIGENYSVTE HHCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHCHHHHHHHHCCCCCCHHH LLLITLSKLAALVIAAASGFRGGRIFPAVFVGVALGLMLHQHVPAVPAAITVSCAIMGLV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LVVTRDGWLSLFMAVAVVPELHLLPILCVVMLPAWLVLAGKPLMLVGKRHSAQDD HHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA