| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yhjX [H]
Identifier: 157371643
GI number: 157371643
Start: 3766777
End: 3768003
Strand: Direct
Name: yhjX [H]
Synonym: Spro_3406
Alternate gene names: 157371643
Gene position: 3766777-3768003 (Clockwise)
Preceding gene: 157371642
Following gene: 157371645
Centisome position: 69.13
GC content: 55.58
Gene sequence:
>1227_bases ATGAACACCAAACCGGCAAATCGCAGCTTAATCGTTCTGGGTACCATCATCTGCCAGATGGGTCTCGGTACTATCTATAC CTGGAGTCTGTTCAACCAGCCGTTGGTCGACAAGTTCCACTGGGGCCTAGCTGACGTCGCCACCACCTTCTCCATCACCA GCTTCTTCCTGGCCTTCGCCACTTTATTTGCCGGCAAACTGCAGGAACGCTTCGGGATCCGTAACCTGACCCTGTGCTCT GGCATCCTGGTGGGTCTGGGCCTGATTGCCAGCGCCTACGTCAGCTCACTGAATATGGTTTATCTGCTGGCCGGGGTGGT GGTCGGTTTCGCGGTAGGTATCGCTTATATCTCTACCCTGTCCAACCTGATCAAATGGTTCCCGGCCAACAAAGGGCTGA TCTCCGGTATCTCGGTGGGGGCTTTCGGTAGCGGTAGCCTGCTGTTCAAATACGTTAACGCCGCGTTGATTGCCGACGTT GGTGTGTCCTCAGCCTTCTTCTACTGGGGTGCCATTGTGATGGCGCTGATTGTGCTGGGCTCCCTGCTGTTGAAAGAGCC GGTACTGGTGAGCCAGTCTGCACAGCAAGGGACCAGCGGCCTGGGCAATGACTTCAGCGTCCGCCAAATGCTGGCGACCA AAGAAGCTTACCTGCTGTTCATCATCTTCTTCGCGGCTTGTATGAGTGGTCTGTATCTGATTGGTATCGTGAAAGACATG GGCGTACAACTGGCTGGGATGGACCTGGCTACCGCCGCCAACACCGTTTCCGCCGTCGCCATCTTTAACACCGCAGGCCG TATTATTCTGGGTACGCTGTCCGATAAAGTGGGCCGCATGCGCGTCATCAGCTTTACCATGCTGGTCACCGTTCTGGCGA TTGTGGCGCTGAGCTTCCTGACTCTGAACCACACCCTGTTCTTCATCTGCGTCGGTGCCGTCGCCTTCTGCTTCGGTGGC AACATCACCGTATTCCCAGCGATTGTCGGTGACTTCTTCGGCCTGAAAAACCACAGCAAAAACTACGGCATCATCTATCA GGGCTTCGGTCTGGGCGCACTGGCCGGTTCGTTTGTCGCCAAATACTTCGGCGGCTTCCATGCGACCTTCATCGTGATTG GCGTGCTGTCAGTGGCTTCTCTGATAATCACCCTGTTCATCAAGGCACCGAAAGCGGTAGCGCAGGAAGAAGAACACTTC TCGCAGGCGCAGCTGGCAAAAGCCTAA
Upstream 100 bases:
>100_bases AGCCATATAATATGCCCATACCGCGGGGTTCAAGACAGCGCCCGCAAATTTCAGCCAACGGCTAACGCCCGGCAATGCAC ACACAGGAAGGAGCCCGGCC
Downstream 100 bases:
>100_bases CGCCTAAAACGATAAAAGGGGCGCAACTTAACGGTTGCGCCCCTTTTTTAATTGCTGCGATTATTACAGATGCATACCCA GCGTCTGGCGCAGGTGAGCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MNTKPANRSLIVLGTIICQMGLGTIYTWSLFNQPLVDKFHWGLADVATTFSITSFFLAFATLFAGKLQERFGIRNLTLCS GILVGLGLIASAYVSSLNMVYLLAGVVVGFAVGIAYISTLSNLIKWFPANKGLISGISVGAFGSGSLLFKYVNAALIADV GVSSAFFYWGAIVMALIVLGSLLLKEPVLVSQSAQQGTSGLGNDFSVRQMLATKEAYLLFIIFFAACMSGLYLIGIVKDM GVQLAGMDLATAANTVSAVAIFNTAGRIILGTLSDKVGRMRVISFTMLVTVLAIVALSFLTLNHTLFFICVGAVAFCFGG NITVFPAIVGDFFGLKNHSKNYGIIYQGFGLGALAGSFVAKYFGGFHATFIVIGVLSVASLIITLFIKAPKAVAQEEEHF SQAQLAKA
Sequences:
>Translated_408_residues MNTKPANRSLIVLGTIICQMGLGTIYTWSLFNQPLVDKFHWGLADVATTFSITSFFLAFATLFAGKLQERFGIRNLTLCS GILVGLGLIASAYVSSLNMVYLLAGVVVGFAVGIAYISTLSNLIKWFPANKGLISGISVGAFGSGSLLFKYVNAALIADV GVSSAFFYWGAIVMALIVLGSLLLKEPVLVSQSAQQGTSGLGNDFSVRQMLATKEAYLLFIIFFAACMSGLYLIGIVKDM GVQLAGMDLATAANTVSAVAIFNTAGRIILGTLSDKVGRMRVISFTMLVTVLAIVALSFLTLNHTLFFICVGAVAFCFGG NITVFPAIVGDFFGLKNHSKNYGIIYQGFGLGALAGSFVAKYFGGFHATFIVIGVLSVASLIITLFIKAPKAVAQEEEHF SQAQLAKA >Mature_408_residues MNTKPANRSLIVLGTIICQMGLGTIYTWSLFNQPLVDKFHWGLADVATTFSITSFFLAFATLFAGKLQERFGIRNLTLCS GILVGLGLIASAYVSSLNMVYLLAGVVVGFAVGIAYISTLSNLIKWFPANKGLISGISVGAFGSGSLLFKYVNAALIADV GVSSAFFYWGAIVMALIVLGSLLLKEPVLVSQSAQQGTSGLGNDFSVRQMLATKEAYLLFIIFFAACMSGLYLIGIVKDM GVQLAGMDLATAANTVSAVAIFNTAGRIILGTLSDKVGRMRVISFTMLVTVLAIVALSFLTLNHTLFFICVGAVAFCFGG NITVFPAIVGDFFGLKNHSKNYGIIYQGFGLGALAGSFVAKYFGGFHATFIVIGVLSVASLIITLFIKAPKAVAQEEEHF SQAQLAKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789969, Length=399, Percent_Identity=44.1102756892231, Blast_Score=337, Evalue=6e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004741 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43226; Mature: 43226
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKPANRSLIVLGTIICQMGLGTIYTWSLFNQPLVDKFHWGLADVATTFSITSFFLAFA CCCCCCCCCCHHHHHHHHHHCCCCEEEHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH TLFAGKLQERFGIRNLTLCSGILVGLGLIASAYVSSLNMVYLLAGVVVGFAVGIAYISTL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNLIKWFPANKGLISGISVGAFGSGSLLFKYVNAALIADVGVSSAFFYWGAIVMALIVLG HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SLLLKEPVLVSQSAQQGTSGLGNDFSVRQMLATKEAYLLFIIFFAACMSGLYLIGIVKDM HHHHHCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVQLAGMDLATAANTVSAVAIFNTAGRIILGTLSDKVGRMRVISFTMLVTVLAIVALSFL CCEEECCHHHHHHHHHHHHHHEECCCCEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHH TLNHTLFFICVGAVAFCFGGNITVFPAIVGDFFGLKNHSKNYGIIYQGFGLGALAGSFVA HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHH KYFGGFHATFIVIGVLSVASLIITLFIKAPKAVAQEEEHFSQAQLAKA HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNTKPANRSLIVLGTIICQMGLGTIYTWSLFNQPLVDKFHWGLADVATTFSITSFFLAFA CCCCCCCCCCHHHHHHHHHHCCCCEEEHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH TLFAGKLQERFGIRNLTLCSGILVGLGLIASAYVSSLNMVYLLAGVVVGFAVGIAYISTL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNLIKWFPANKGLISGISVGAFGSGSLLFKYVNAALIADVGVSSAFFYWGAIVMALIVLG HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH SLLLKEPVLVSQSAQQGTSGLGNDFSVRQMLATKEAYLLFIIFFAACMSGLYLIGIVKDM HHHHHCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVQLAGMDLATAANTVSAVAIFNTAGRIILGTLSDKVGRMRVISFTMLVTVLAIVALSFL CCEEECCHHHHHHHHHHHHHHEECCCCEEEEECHHCCCHHHHHHHHHHHHHHHHHHHHHH TLNHTLFFICVGAVAFCFGGNITVFPAIVGDFFGLKNHSKNYGIIYQGFGLGALAGSFVA HHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHH KYFGGFHATFIVIGVLSVASLIITLFIKAPKAVAQEEEHFSQAQLAKA HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]