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The map label for this gene is ybiU [H]

Identifier: 157371640

GI number: 157371640

Start: 3762673

End: 3763920

Strand: Direct

Name: ybiU [H]

Synonym: Spro_3403

Alternate gene names: 157371640

Gene position: 3762673-3763920 (Clockwise)

Preceding gene: 157371637

Following gene: 157371641

Centisome position: 69.05

GC content: 57.77

Gene sequence:

>1248_bases
ATGGCTTCCTTACAGATTGACGATATTCCAGGCGCAATTAAAACCATCAAACAACAACTGCGCCAGGCATTACCGAATTA
CCGTGAGACCTTCCTGGCACTGGAAGACAATATCCGTCAGCAGGTCGAACAAATCCGCCAGGAGCTGGCCGCCGGTCAAA
ACCCGGTGCCGCAAATCGATGCCGAAGATATCCTTCAACAGCGCGTCAGCGAGCAGCAAAAAGCGCTGATTAAACAGCGC
GGTGCCTGCGCCATTCGCGGCGTTTTTCCCCGTGATAAGGCTACGGCCTGGAACCGGGAAATCGGCGATTATCTCGACCG
CAACAACTTCGTCGAACGCCTGAAAGGGGCCGCCGAAGACAACTACTTCGGCAAACTGGCCGCCAGCAGGCCCCAAATCT
ACGGCATTTACTGGTCAAAACCGCAGGTGGAAGCCCGTCAGGACGCCAGAATGCACGCGGTACAGGTATTCCTTAACAGC
CTGTGGGAAACCGAAAGCAACGGAAAACAGCATTTTGACCCGACGCGCGTCGCCACCTACGCCGATCGCACCCGTCGCCG
TCCGCCGAACTCCTCTTCGCTGGGCCTGTCGCCGCACGTAGACAGCGGCACCATTGAGCGCTGGCTGGATGAAAACTTCC
GTTACGTCTATCGCCACGTGTTCTCCGGCAACTGGCAGGATTATGATCCGTTCGCCGCCGACGGCCGCACCGAAGTGCGT
GAAATCGCTTCACCGGCGGTGTGCTCGATGTTCCGCACCTTCCAGGGCTGGACGGCCCTGACGCCGCAGCGCACCAATGC
CGGCACGCTGAACCTGGTGCCGGTGGCCAACGCCATGGCTTATGTGTTGCTGCGTGCGCTGCAGGATGACGTCGCCGACG
ATGATCTGTGCGATGCCGCCCCAGGACGGGCACTTTCGATCTCCGAAAAATGGCATCCCCTTTTAATCAGTGGGATTTCC
CCTATTCCCGATTTAGAGCCGGGTGATACGATTTTCTGGCACTGCGACGTGATCCACGCGGTGGAAAATGAGCATAACGG
CGAATTCGACAGCAACGTAATGTACATCGCTGCCGCGCCGGGCTGCGAGAAAAATGATGCCTACCTGCAACGTCAGCTGC
CCAGCTTTATCGCCGGCAAAACCCCGCCGGATTTCGCCCCTGATGATTTCGAAGTGGACTTCGTCGGCCGGGCCACGGTT
GACCTGCTGACAGCGCTCGGCAAGGAACAGTTGGGCATTAATAAATAA

Upstream 100 bases:

>100_bases
ATCCAGATAATCATTAACGTCAAAACAACAAAACCATAACGCCTTACCCGGTCCCCTACAACCGTCCGTCGTTGCTCATC
CGCAACACGAGGAGAACACC

Downstream 100 bases:

>100_bases
TACGCTGCCCCGTGGCGCGCCGCCCGGCCGTCACGGGGTCAATTCGCTGTGATATACTCCCGGTATCTTTCCGCCGCAGC
GAGAGCCCGCCGTGCACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MASLQIDDIPGAIKTIKQQLRQALPNYRETFLALEDNIRQQVEQIRQELAAGQNPVPQIDAEDILQQRVSEQQKALIKQR
GACAIRGVFPRDKATAWNREIGDYLDRNNFVERLKGAAEDNYFGKLAASRPQIYGIYWSKPQVEARQDARMHAVQVFLNS
LWETESNGKQHFDPTRVATYADRTRRRPPNSSSLGLSPHVDSGTIERWLDENFRYVYRHVFSGNWQDYDPFAADGRTEVR
EIASPAVCSMFRTFQGWTALTPQRTNAGTLNLVPVANAMAYVLLRALQDDVADDDLCDAAPGRALSISEKWHPLLISGIS
PIPDLEPGDTIFWHCDVIHAVENEHNGEFDSNVMYIAAAPGCEKNDAYLQRQLPSFIAGKTPPDFAPDDFEVDFVGRATV
DLLTALGKEQLGINK

Sequences:

>Translated_415_residues
MASLQIDDIPGAIKTIKQQLRQALPNYRETFLALEDNIRQQVEQIRQELAAGQNPVPQIDAEDILQQRVSEQQKALIKQR
GACAIRGVFPRDKATAWNREIGDYLDRNNFVERLKGAAEDNYFGKLAASRPQIYGIYWSKPQVEARQDARMHAVQVFLNS
LWETESNGKQHFDPTRVATYADRTRRRPPNSSSLGLSPHVDSGTIERWLDENFRYVYRHVFSGNWQDYDPFAADGRTEVR
EIASPAVCSMFRTFQGWTALTPQRTNAGTLNLVPVANAMAYVLLRALQDDVADDDLCDAAPGRALSISEKWHPLLISGIS
PIPDLEPGDTIFWHCDVIHAVENEHNGEFDSNVMYIAAAPGCEKNDAYLQRQLPSFIAGKTPPDFAPDDFEVDFVGRATV
DLLTALGKEQLGINK
>Mature_414_residues
ASLQIDDIPGAIKTIKQQLRQALPNYRETFLALEDNIRQQVEQIRQELAAGQNPVPQIDAEDILQQRVSEQQKALIKQRG
ACAIRGVFPRDKATAWNREIGDYLDRNNFVERLKGAAEDNYFGKLAASRPQIYGIYWSKPQVEARQDARMHAVQVFLNSL
WETESNGKQHFDPTRVATYADRTRRRPPNSSSLGLSPHVDSGTIERWLDENFRYVYRHVFSGNWQDYDPFAADGRTEVRE
IASPAVCSMFRTFQGWTALTPQRTNAGTLNLVPVANAMAYVLLRALQDDVADDDLCDAAPGRALSISEKWHPLLISGISP
IPDLEPGDTIFWHCDVIHAVENEHNGEFDSNVMYIAAAPGCEKNDAYLQRQLPSFIAGKTPPDFAPDDFEVDFVGRATVD
LLTALGKEQLGINK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787042, Length=409, Percent_Identity=47.4327628361858, Blast_Score=379, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010856 [H]

Pfam domain/function: PF07350 DUF1479 [H]

EC number: NA

Molecular weight: Translated: 46671; Mature: 46540

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLQIDDIPGAIKTIKQQLRQALPNYRETFLALEDNIRQQVEQIRQELAAGQNPVPQID
CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AEDILQQRVSEQQKALIKQRGACAIRGVFPRDKATAWNREIGDYLDRNNFVERLKGAAED
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
NYFGKLAASRPQIYGIYWSKPQVEARQDARMHAVQVFLNSLWETESNGKQHFDPTRVATY
CCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ADRTRRRPPNSSSLGLSPHVDSGTIERWLDENFRYVYRHVFSGNWQDYDPFAADGRTEVR
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
EIASPAVCSMFRTFQGWTALTPQRTNAGTLNLVPVANAMAYVLLRALQDDVADDDLCDAA
HHCCHHHHHHHHHHCCCEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHCCC
PGRALSISEKWHPLLISGISPIPDLEPGDTIFWHCDVIHAVENEHNGEFDSNVMYIAAAP
CCCEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCEEEEEECC
GCEKNDAYLQRQLPSFIAGKTPPDFAPDDFEVDFVGRATVDLLTALGKEQLGINK
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCHHHCCCCC
>Mature Secondary Structure 
ASLQIDDIPGAIKTIKQQLRQALPNYRETFLALEDNIRQQVEQIRQELAAGQNPVPQID
CCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
AEDILQQRVSEQQKALIKQRGACAIRGVFPRDKATAWNREIGDYLDRNNFVERLKGAAED
HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
NYFGKLAASRPQIYGIYWSKPQVEARQDARMHAVQVFLNSLWETESNGKQHFDPTRVATY
CCHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
ADRTRRRPPNSSSLGLSPHVDSGTIERWLDENFRYVYRHVFSGNWQDYDPFAADGRTEVR
HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
EIASPAVCSMFRTFQGWTALTPQRTNAGTLNLVPVANAMAYVLLRALQDDVADDDLCDAA
HHCCHHHHHHHHHHCCCEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHCCC
PGRALSISEKWHPLLISGISPIPDLEPGDTIFWHCDVIHAVENEHNGEFDSNVMYIAAAP
CCCEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCEEEEEECC
GCEKNDAYLQRQLPSFIAGKTPPDFAPDDFEVDFVGRATVDLLTALGKEQLGINK
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]